RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 NHLRC3Q5JS37 347 aa7.9□□□□□ -1.14
YBX3-212ENST00000542002 KRBOX4Q5JUW0 171 aa7.9□□□□□ -1.14
YBX3-212ENST00000542002 RSBN1Q5VWQ0 802 aaPredicted RBP7.9□□□□□ -1.14
YBX3-212ENST00000542002 OR10K2Q6IF99 312 aa7.9□□□□□ -1.14
YBX3-212ENST00000542002 SPARTQ8N0X7 666 aa7.9□□□□□ -1.14
YBX3-212ENST00000542002 SUMF2Q8NBJ7 301 aa7.9□□□□□ -1.14
YBX3-212ENST00000542002 CHST4Q8NCG5 386 aa7.9□□□□□ -1.14
YBX3-212ENST00000542002 PIFOQ8TCI5 191 aa7.9□□□□□ -1.14
YBX3-212ENST00000542002 GCDHQ92947 438 aaPredicted RBP7.9□□□□□ -1.14
YBX3-212ENST00000542002 CPNE2Q96FN4 548 aaPredicted RBP7.9□□□□□ -1.14
YBX3-212ENST00000542002 DPCDQ9BVM2 203 aaPredicted RBP7.9□□□□□ -1.14
YBX3-212ENST00000542002 IFT22Q9H7X7 185 aa7.9□□□□□ -1.14
YBX3-212ENST00000542002 ZNRD1Q9P1U0 126 aa7.9□□□□□ -1.14
YBX3-212ENST00000542002 KIF25Q9UIL4 384 aa7.9□□□□□ -1.14
YBX3-212ENST00000542002 MRPS28Q9Y2Q9 187 aaKnown RBP7.9□□□□□ -1.14
YBX3-212ENST00000542002 UBE2J1Q9Y385 318 aaPredicted RBP7.9□□□□□ -1.14
YBX3-212ENST00000542002 FAM96BQ9Y3D0 163 aa7.9□□□□□ -1.14
YBX3-212ENST00000542002 SHISA3A0PJX4 238 aa7.89□□□□□ -1.15
YBX3-212ENST00000542002 ODF3BA8MYP8 253 aa7.89□□□□□ -1.15
YBX3-212ENST00000542002 RBP4P02753 201 aa7.89□□□□□ -1.15
YBX3-212ENST00000542002 CSTBP04080 98 aaKnown RBP7.89□□□□□ -1.15
YBX3-212ENST00000542002 HKR1P10072 659 aa7.89□□□□□ -1.15
YBX3-212ENST00000542002 GTF2F2P13984 249 aa7.89□□□□□ -1.15
YBX3-212ENST00000542002 MAPK3P27361 379 aaPredicted RBP7.89□□□□□ -1.15
YBX3-212ENST00000542002 RAB13P51153 203 aa7.89□□□□□ -1.15
YBX3-212ENST00000542002 GABARAPL2P60520 117 aa7.89□□□□□ -1.15
YBX3-212ENST00000542002 ACTG1P63261 375 aa7.89□□□□□ -1.15
YBX3-212ENST00000542002 QRFPP83859 136 aa7.89□□□□□ -1.15
YBX3-212ENST00000542002 HSD17B12Q53GQ0 312 aa7.89□□□□□ -1.15
YBX3-212ENST00000542002 PAN3Q58A45 887 aaKnown RBP7.89□□□□□ -1.15
YBX3-212ENST00000542002 C1orf100Q5SVJ3 147 aa7.89□□□□□ -1.15
YBX3-212ENST00000542002 PRAMEF5Q5TYX0 476 aa7.89□□□□□ -1.15
YBX3-212ENST00000542002 SIGIRRQ6IA17 410 aa7.89□□□□□ -1.15
YBX3-212ENST00000542002 BEND2Q8NDZ0 799 aa7.89□□□□□ -1.15
YBX3-212ENST00000542002 OR11H6Q8NGC7 330 aa7.89□□□□□ -1.15
YBX3-212ENST00000542002 OR13A1Q8NGR1 328 aa7.89□□□□□ -1.15
YBX3-212ENST00000542002 PPP1R35Q8TAP8 253 aa7.89□□□□□ -1.15
YBX3-212ENST00000542002 SSMEM1Q8WWF3 244 aa7.89□□□□□ -1.15
YBX3-212ENST00000542002 PHYHIPQ92561 330 aa7.89□□□□□ -1.15
YBX3-212ENST00000542002 UQCC2Q9BRT2 126 aa7.89□□□□□ -1.15
YBX3-212ENST00000542002 MEGF9Q9H1U4 602 aa7.89□□□□□ -1.15
YBX3-212ENST00000542002 KCNK15Q9H427 330 aa7.89□□□□□ -1.15
YBX3-212ENST00000542002 TCF7L1Q9HCS4 588 aa7.89□□□□□ -1.15
YBX3-212ENST00000542002 LRRC42Q9Y546 428 aa7.89□□□□□ -1.15
YBX3-212ENST00000542002 TENM1Q9UKZ4 2725 aa7.89□□□□□ -1.15
YBX3-212ENST00000542002 MEIKINA0A087WXM9 373 aa7.88□□□□□ -1.15
YBX3-212ENST00000542002 TRGV10A0A0A0MS01 117 aa7.88□□□□□ -1.15
YBX3-212ENST00000542002 hCG_1809904A0A1W2PP81 198 aa7.88□□□□□ -1.15
YBX3-212ENST00000542002 A0A1W2PPE2 198 aa7.88□□□□□ -1.15
YBX3-212ENST00000542002 A0A1W2PR64 198 aa7.88□□□□□ -1.15
YBX3-212ENST00000542002 A0A1W2PRV1 198 aa7.88□□□□□ -1.15
YBX3-212ENST00000542002 FAM172BPA6NC97 362 aa7.88□□□□□ -1.15
YBX3-212ENST00000542002 ZNF780AO75290 641 aaPredicted RBP7.88□□□□□ -1.15
YBX3-212ENST00000542002 OR7C1O76099 320 aaPredicted RBP7.88□□□□□ -1.15
YBX3-212ENST00000542002 ARG1P05089 322 aa7.88□□□□□ -1.15
YBX3-212ENST00000542002 FBP1P09467 338 aa7.88□□□□□ -1.15
YBX3-212ENST00000542002 VSIG8P0DPA2 414 aa7.88□□□□□ -1.15
YBX3-212ENST00000542002 CDK2P24941 298 aa7.88□□□□□ -1.15
YBX3-212ENST00000542002 PAX5Q02548 391 aa7.88□□□□□ -1.15
YBX3-212ENST00000542002 AWAT1Q58HT5 328 aa7.88□□□□□ -1.15
YBX3-212ENST00000542002 UBE2UQ5VVX9 321 aa7.88□□□□□ -1.15
YBX3-212ENST00000542002 ZNF626Q68DY1 528 aa7.88□□□□□ -1.15
YBX3-212ENST00000542002 AWAT2Q6E213 333 aa7.88□□□□□ -1.15
YBX3-212ENST00000542002 FAM53AQ6NSI3 398 aaPredicted RBP7.88□□□□□ -1.15
YBX3-212ENST00000542002 ZNF367Q7RTV3 350 aa7.88□□□□□ -1.15
YBX3-212ENST00000542002 C5orf24Q7Z6I8 188 aa7.88□□□□□ -1.15
YBX3-212ENST00000542002 TRAPPC6BQ86SZ2 158 aa7.88□□□□□ -1.15
YBX3-212ENST00000542002 RTN4RL2Q86UN3 420 aa7.88□□□□□ -1.15
YBX3-212ENST00000542002 TMEM86BQ8N661 226 aa7.88□□□□□ -1.15
YBX3-212ENST00000542002 OR13D1Q8NGV5 346 aa7.88□□□□□ -1.15
YBX3-212ENST00000542002 RFESDQ8TAC1 157 aa7.88□□□□□ -1.15
YBX3-212ENST00000542002 DYRK2Q92630 601 aa7.88□□□□□ -1.15
YBX3-212ENST00000542002 FAM46BQ96A09 425 aa7.88□□□□□ -1.15
YBX3-212ENST00000542002 FOXRED1Q96CU9 486 aaPredicted RBP7.88□□□□□ -1.15
YBX3-212ENST00000542002 S100A13Q99584 98 aa7.88□□□□□ -1.15
YBX3-212ENST00000542002 YTHDF1Q9BYJ9 559 aaKnown RBP7.88□□□□□ -1.15
YBX3-212ENST00000542002 SELENOIQ9C0D9 397 aa7.88□□□□□ -1.15
YBX3-212ENST00000542002 TMEM133Q9H2Q1 129 aa7.88□□□□□ -1.15
YBX3-212ENST00000542002 NCOR1P1Q9H4R4 102 aa7.88□□□□□ -1.15
YBX3-212ENST00000542002 LINC00574Q9H8X3 128 aa7.88□□□□□ -1.15
YBX3-212ENST00000542002 ZMAT3Q9HA38 289 aaKnown RBP7.88□□□□□ -1.15
YBX3-212ENST00000542002 TAS2R3Q9NYW6 316 aa7.88□□□□□ -1.15
YBX3-212ENST00000542002 C1RLQ9NZP8 487 aa7.88□□□□□ -1.15
YBX3-212ENST00000542002 BLOC1S6Q9UL45 172 aa7.88□□□□□ -1.15
YBX3-212ENST00000542002 AK6Q9Y3D8 172 aaKnown RBP7.88□□□□□ -1.15
YBX3-212ENST00000542002 POMT1Q9Y6A1 747 aa7.88□□□□□ -1.15
YBX3-212ENST00000542002 SESN1Q9Y6P5 492 aa7.88□□□□□ -1.15
YBX3-212ENST00000542002 STAB1Q9NY15 2570 aa7.88□□□□□ -1.15
YBX3-212ENST00000542002 IGHV2-26A0A0B4J1V2 119 aa7.87□□□□□ -1.15
YBX3-212ENST00000542002 KBTBD11-OT1A0A1B0GTJ5 212 aa7.87□□□□□ -1.15
YBX3-212ENST00000542002 FUOMA2VDF0 154 aa7.87□□□□□ -1.15
YBX3-212ENST00000542002 SLC22A1O15245 554 aa7.87□□□□□ -1.15
YBX3-212ENST00000542002 GPR137BO60478 399 aa7.87□□□□□ -1.15
YBX3-212ENST00000542002 MRPS14O60783 128 aaKnown RBP7.87□□□□□ -1.15
YBX3-212ENST00000542002 CRTAPO75718 401 aaPredicted RBP7.87□□□□□ -1.15
YBX3-212ENST00000542002 CLPXO76031 633 aa7.87□□□□□ -1.15
YBX3-212ENST00000542002 MT-ND4P03905 459 aa7.87□□□□□ -1.15
YBX3-212ENST00000542002 MGMTP16455 207 aa7.87□□□□□ -1.15
YBX3-212ENST00000542002 MDKP21741 143 aaPredicted RBP7.87□□□□□ -1.15
YBX3-212ENST00000542002 CALRP27797 417 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms