RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 PSPNO60542 156 aa14.49□□□□□ -0.09
CLSTN3-210ENST00000540931 LY6G6DO95868 133 aa14.49□□□□□ -0.09
CLSTN3-210ENST00000540931 OR3A1P47881 315 aa14.49□□□□□ -0.09
CLSTN3-210ENST00000540931 CEBPDP49716 269 aaPredicted RBP14.49□□□□□ -0.09
CLSTN3-210ENST00000540931 P2RX3P56373 397 aa14.49□□□□□ -0.09
CLSTN3-210ENST00000540931 EDDM3BP56851 147 aa14.49□□□□□ -0.09
CLSTN3-210ENST00000540931 PAX2Q02962 417 aa14.49□□□□□ -0.09
CLSTN3-210ENST00000540931 PAX8Q06710 450 aa14.49□□□□□ -0.09
CLSTN3-210ENST00000540931 HNRNPA0Q13151 305 aaKnown RBP14.49□□□□□ -0.09
CLSTN3-210ENST00000540931 UNC119Q13432 240 aa14.49□□□□□ -0.09
CLSTN3-210ENST00000540931 KRBOX4Q5JUW0 171 aa14.49□□□□□ -0.09
CLSTN3-210ENST00000540931 SLC35E4Q6ICL7 350 aa14.49□□□□□ -0.09
CLSTN3-210ENST00000540931 FAHD2BQ6P2I3 314 aaPredicted RBP14.49□□□□□ -0.09
CLSTN3-210ENST00000540931 FAHD2AQ96GK7 314 aa14.49□□□□□ -0.09
CLSTN3-210ENST00000540931 MDFIQ99750 246 aa14.49□□□□□ -0.09
CLSTN3-210ENST00000540931 LPAR5Q9H1C0 372 aa14.49□□□□□ -0.09
CLSTN3-210ENST00000540931 GAL3ST2Q9H3Q3 398 aa14.49□□□□□ -0.09
CLSTN3-210ENST00000540931 RNF167Q9H6Y7 350 aa14.49□□□□□ -0.09
CLSTN3-210ENST00000540931 C7orf69Q9H7B7 122 aa14.49□□□□□ -0.09
CLSTN3-210ENST00000540931 LPAR2Q9HBW0 351 aa14.49□□□□□ -0.09
CLSTN3-210ENST00000540931 PLEKHJ1Q9NW61 149 aa14.49□□□□□ -0.09
CLSTN3-210ENST00000540931 TAS2R3Q9NYW6 316 aa14.49□□□□□ -0.09
CLSTN3-210ENST00000540931 CDC42EP3Q9UKI2 254 aa14.49□□□□□ -0.09
CLSTN3-210ENST00000540931 MGAT4AQ9UM21 535 aa14.49□□□□□ -0.09
CLSTN3-210ENST00000540931 PEX16Q9Y5Y5 336 aa14.49□□□□□ -0.09
CLSTN3-210ENST00000540931 AUP1Q9Y679 476 aa14.49□□□□□ -0.09
CLSTN3-210ENST00000540931 ABCA1O95477 2261 aa14.48□□□□□ -0.09
CLSTN3-210ENST00000540931 TRAV24A0A0B4J272 114 aa14.48□□□□□ -0.09
CLSTN3-210ENST00000540931 A0A1W2PP11 408 aa14.48□□□□□ -0.09
CLSTN3-210ENST00000540931 TMEM30CPA0ZSE6 113 aa14.48□□□□□ -0.09
CLSTN3-210ENST00000540931 CCDC160A6NGH7 325 aa14.48□□□□□ -0.09
CLSTN3-210ENST00000540931 ZNF182P17025 639 aaPredicted RBP14.48□□□□□ -0.09
CLSTN3-210ENST00000540931 GZMHP20718 246 aa14.48□□□□□ -0.09
CLSTN3-210ENST00000540931 BLVRBP30043 206 aaPredicted RBP14.48□□□□□ -0.09
CLSTN3-210ENST00000540931 RBMXP38159 391 aaKnown RBP14.48□□□□□ -0.09
CLSTN3-210ENST00000540931 CLDN12P56749 244 aa14.48□□□□□ -0.09
CLSTN3-210ENST00000540931 MRPS15P82914 257 aaKnown RBP14.48□□□□□ -0.09
CLSTN3-210ENST00000540931 PDCD1Q15116 288 aa14.48□□□□□ -0.09
CLSTN3-210ENST00000540931 ZNF554Q86TJ5 538 aa14.48□□□□□ -0.09
CLSTN3-210ENST00000540931 NR2C2APQ86WQ0 139 aa14.48□□□□□ -0.09
CLSTN3-210ENST00000540931 PRIMA1Q86XR5 153 aa14.48□□□□□ -0.09
CLSTN3-210ENST00000540931 OR4S1Q8NGB4 309 aa14.48□□□□□ -0.09
CLSTN3-210ENST00000540931 CORO2AQ92828 525 aa14.48□□□□□ -0.09
CLSTN3-210ENST00000540931 DACT3Q96B18 629 aaPredicted RBP14.48□□□□□ -0.09
CLSTN3-210ENST00000540931 ISOC1Q96CN7 298 aa14.48□□□□□ -0.09
CLSTN3-210ENST00000540931 NKX3-1Q99801 234 aaPredicted RBP14.48□□□□□ -0.09
CLSTN3-210ENST00000540931 PPA2Q9H2U2 334 aa14.48□□□□□ -0.09
CLSTN3-210ENST00000540931 METTL8Q9H825 291 aaKnown RBP14.48□□□□□ -0.09
CLSTN3-210ENST00000540931 DIABLOQ9NR28 239 aa14.48□□□□□ -0.09
CLSTN3-210ENST00000540931 OPN4Q9UHM6 478 aa14.48□□□□□ -0.09
CLSTN3-210ENST00000540931 C22orf46C9J442 243 aa14.47□□□□□ -0.09
CLSTN3-210ENST00000540931 TMEM30BQ3MIR4 351 aa14.47□□□□□ -0.09
CLSTN3-210ENST00000540931 NCR3LG1Q68D85 454 aa14.47□□□□□ -0.09
CLSTN3-210ENST00000540931 Q6ZTK2 550 aa14.47□□□□□ -0.09
CLSTN3-210ENST00000540931 FAM185AQ8N0U4 392 aa14.47□□□□□ -0.09
CLSTN3-210ENST00000540931 NANPQ8TBE9 248 aa14.47□□□□□ -0.09
CLSTN3-210ENST00000540931 S100A16Q96FQ6 103 aaKnown RBP14.47□□□□□ -0.09
CLSTN3-210ENST00000540931 CHST6Q9GZX3 395 aa14.47□□□□□ -0.09
CLSTN3-210ENST00000540931 UNKLQ9H9P5 680 aaKnown RBP14.47□□□□□ -0.09
CLSTN3-210ENST00000540931 ETAA1Q9NY74 926 aa14.47□□□□□ -0.09
CLSTN3-210ENST00000540931 RSL24D1Q9UHA3 163 aaKnown RBP14.47□□□□□ -0.09
CLSTN3-210ENST00000540931 METRNQ9UJH8 293 aa14.47□□□□□ -0.09
CLSTN3-210ENST00000540931 TLN2Q9Y4G6 2542 aa14.47□□□□□ -0.09
CLSTN3-210ENST00000540931 ODAMA1E959 279 aa14.46□□□□□ -0.09
CLSTN3-210ENST00000540931 SERPINE3A8MV23 424 aa14.46□□□□□ -0.09
CLSTN3-210ENST00000540931 CLEC2LP0C7M8 214 aa14.46□□□□□ -0.09
CLSTN3-210ENST00000540931 SLC2A2P11168 524 aaPredicted RBP14.46□□□□□ -0.09
CLSTN3-210ENST00000540931 SELLP14151 372 aa14.46□□□□□ -0.09
CLSTN3-210ENST00000540931 CHATP28329 748 aa14.46□□□□□ -0.09
CLSTN3-210ENST00000540931 GUCA2AQ02747 115 aa14.46□□□□□ -0.09
CLSTN3-210ENST00000540931 KRTAP1-1Q07627 177 aa14.46□□□□□ -0.09
CLSTN3-210ENST00000540931 EDDM3AQ14507 147 aa14.46□□□□□ -0.09
CLSTN3-210ENST00000540931 C6orf183Q5T699 404 aa14.46□□□□□ -0.09
CLSTN3-210ENST00000540931 OR52W1Q6IF63 320 aa14.46□□□□□ -0.09
CLSTN3-210ENST00000540931 OR10K2Q6IF99 312 aa14.46□□□□□ -0.09
CLSTN3-210ENST00000540931 OR10A7Q8NGE5 316 aa14.46□□□□□ -0.09
CLSTN3-210ENST00000540931 OR10R2Q8NGX6 335 aa14.46□□□□□ -0.09
CLSTN3-210ENST00000540931 DGCR14Q96DF8 476 aaKnown RBP14.46□□□□□ -0.09
CLSTN3-210ENST00000540931 RAB3CQ96E17 227 aa14.46□□□□□ -0.09
CLSTN3-210ENST00000540931 ZNF714Q96N38 554 aa14.46□□□□□ -0.09
CLSTN3-210ENST00000540931 NAA50Q9GZZ1 169 aaKnown RBP14.46□□□□□ -0.09
CLSTN3-210ENST00000540931 ATG5Q9H1Y0 275 aa14.46□□□□□ -0.09
CLSTN3-210ENST00000540931 RHBDL2Q9NX52 303 aa14.46□□□□□ -0.09
CLSTN3-210ENST00000540931 CEPT1Q9Y6K0 416 aa14.46□□□□□ -0.09
CLSTN3-210ENST00000540931 COL6A5A8TX70 2615 aa14.45□□□□□ -0.1
CLSTN3-210ENST00000540931 A0A1B0GW55 424 aa14.45□□□□□ -0.1
CLSTN3-210ENST00000540931 ZNF729A6NN14 1252 aaPredicted RBP14.45□□□□□ -0.1
CLSTN3-210ENST00000540931 TOX4O94842 621 aa14.45□□□□□ -0.1
CLSTN3-210ENST00000540931 DUX4L2P0CJ85 424 aa14.45□□□□□ -0.1
CLSTN3-210ENST00000540931 DUX4L3P0CJ86 424 aa14.45□□□□□ -0.1
CLSTN3-210ENST00000540931 DUX4L4P0CJ87 422 aa14.45□□□□□ -0.1
CLSTN3-210ENST00000540931 DUX4L5P0CJ88 424 aa14.45□□□□□ -0.1
CLSTN3-210ENST00000540931 DUX4L6P0CJ89 424 aa14.45□□□□□ -0.1
CLSTN3-210ENST00000540931 DUX4L7P0CJ90 424 aa14.45□□□□□ -0.1
CLSTN3-210ENST00000540931 ZNF728P0DKX0 622 aa14.45□□□□□ -0.1
CLSTN3-210ENST00000540931 VEGFCP49767 419 aa14.45□□□□□ -0.1
CLSTN3-210ENST00000540931 PITPNAQ00169 270 aa14.45□□□□□ -0.1
CLSTN3-210ENST00000540931 CR1LQ2VPA4 569 aa14.45□□□□□ -0.1
CLSTN3-210ENST00000540931 UBE2NLQ5JXB2 153 aa14.45□□□□□ -0.1
CLSTN3-210ENST00000540931 TMEM200BQ69YZ2 307 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms