RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 FAM90A1Q86YD7 464 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 MRPL41Q8IXM3 137 aaKnown RBP5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 BPIFB2Q8N4F0 458 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 TOMM5Q8N4H5 51 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 GCSAMQ8N6F7 178 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 ASCC1Q8N9N2 400 aaKnown RBP5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 SUMF2Q8NBJ7 301 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 SETD6Q8TBK2 473 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 SMIM4Q8WVI0 70 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 NUDCD2Q8WVJ2 157 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 EAF1Q96JC9 268 aaPredicted RBP5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 RHOVQ96L33 236 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 CCL19Q99731 98 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 CMSS1Q9BQ75 279 aaKnown RBP5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 SULT4A1Q9BR01 284 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 ST6GALNAC5Q9BVH7 336 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 DPCDQ9BVM2 203 aaPredicted RBP5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 PLEKHF2Q9H8W4 249 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 HES4Q9HCC6 221 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 PALMDQ9NP74 551 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 DLL4Q9NR61 685 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 TMEM106BQ9NUM4 274 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 ING3Q9NXR8 418 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 TAS2R8Q9NYW2 309 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 ZNF581Q9P0T4 197 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 KLK11Q9UBX7 282 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 AK3Q9UIJ7 227 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 ELF5Q9UKW6 265 aaPredicted RBP5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 PPIAL4AQ9Y536 164 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 CADP27708 2225 aa5.57□□□□□ -1.52
CLTCL1-206ENST00000540896 ROS1P08922 2347 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 POLQO75417 2590 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 ISPDA4D126 451 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 NKX6-3A6NJ46 265 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 FOXI3A8MTJ6 420 aaPredicted RBP5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 H7C417 338 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 LGALS8O00214 317 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 MFNGO00587 321 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 PPIHO43447 177 aaKnown RBP5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 ORC5O43913 435 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 LY6HO94772 140 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 ECDO95905 644 aaPredicted RBP5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 GYPAP02724 150 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 GLAP06280 429 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 MELTFP08582 738 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 MED14OSP0DP75 135 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 PSG2P11465 335 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 MUC1P15941 1255 aaPredicted RBP5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 RCVRNP35243 200 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 CBX5P45973 191 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 EFNA4P52798 201 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 ACTBP60709 375 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 ACTG1P63261 375 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 COL10A1Q03692 680 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 ZNF146Q15072 292 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 KCNJ8Q15842 424 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 LCE4AQ5TA78 99 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 STEAP3Q658P3 488 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 MZT2BQ6NZ67 158 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 Q6P435 159 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 DCDC5Q6ZRR9 648 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 RTN4RL2Q86UN3 420 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 C1QL4Q86Z23 238 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 TGIF2LYQ8IUE0 185 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 POC5Q8NA72 575 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 PPP1R35Q8TAP8 253 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 GPX8Q8TED1 209 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 ST8SIA4Q92187 359 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 NRGNQ92686 78 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 RAB1CQ92928 201 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 YIPF5Q969M3 257 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 TIMD4Q96H15 378 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 SDHCQ99643 169 aaPredicted RBP5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 PPA2Q9H2U2 334 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 MYOZ1Q9NP98 299 aaPredicted RBP5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 C12orf4Q9NQ89 552 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 ZNF701Q9NV72 531 aaPredicted RBP5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 DCAF16Q9NXF7 216 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 ETAA1Q9NY74 926 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 MTFP1Q9UDX5 166 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 EDARQ9UNE0 448 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 PLEKHA6Q9Y2H5 1048 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 KCNK7Q9Y2U2 307 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 MYO9AB2RTY4 2548 aa5.56□□□□□ -1.52
CLTCL1-206ENST00000540896 FBN2P35556 2912 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 IGKV1D-17A0A075B6S4 117 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 TRAV24A0A0B4J272 114 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 CYSRT1A8MQ03 144 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 H7C1Q1 480 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 SLC33A1O00400 549 aaPredicted RBP5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 LANCL1O43813 399 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 SSX5O60225 188 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 NDUFS7O75251 213 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 CA11O75493 328 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 TFF1P04155 84 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 IFNA6P05013 189 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 CSF1P09603 554 aa5.55□□□□□ -1.52
CLTCL1-206ENST00000540896 AMY2BP19961 511 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms