RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 UCHL1P09936 223 aa13.72□□□□□ -0.21
CD9-209ENST00000540891 PAX6P26367 422 aa13.72□□□□□ -0.21
CD9-209ENST00000540891 GDNFP39905 211 aa13.72□□□□□ -0.21
CD9-209ENST00000540891 GABARAPL2P60520 117 aa13.72□□□□□ -0.21
CD9-209ENST00000540891 PAN3Q58A45 887 aaKnown RBP13.72□□□□□ -0.21
CD9-209ENST00000540891 AWAT1Q58HT5 328 aa13.72□□□□□ -0.21
CD9-209ENST00000540891 RSBN1Q5VWQ0 802 aaPredicted RBP13.72□□□□□ -0.21
CD9-209ENST00000540891 ZNF626Q68DY1 528 aa13.72□□□□□ -0.21
CD9-209ENST00000540891 BAIAP2L2Q6UXY1 529 aa13.72□□□□□ -0.21
CD9-209ENST00000540891 C12orf54Q6X4T0 127 aa13.72□□□□□ -0.21
CD9-209ENST00000540891 LHFPL4Q7Z7J7 247 aa13.72□□□□□ -0.21
CD9-209ENST00000540891 TRAPPC6BQ86SZ2 158 aa13.72□□□□□ -0.21
CD9-209ENST00000540891 SUMF2Q8NBJ7 301 aa13.72□□□□□ -0.21
CD9-209ENST00000540891 OR11H6Q8NGC7 330 aa13.72□□□□□ -0.21
CD9-209ENST00000540891 PLPPR1Q8TBJ4 325 aa13.72□□□□□ -0.21
CD9-209ENST00000540891 PHYHIPQ92561 330 aa13.72□□□□□ -0.21
CD9-209ENST00000540891 SESN1Q9Y6P5 492 aa13.72□□□□□ -0.21
CD9-209ENST00000540891 TRGV10A0A0A0MS01 117 aa13.71□□□□□ -0.21
CD9-209ENST00000540891 FUOMA2VDF0 154 aa13.71□□□□□ -0.21
CD9-209ENST00000540891 MEGF11A6BM72 1044 aa13.71□□□□□ -0.21
CD9-209ENST00000540891 OR7C1O76099 320 aaPredicted RBP13.71□□□□□ -0.21
CD9-209ENST00000540891 PAHP00439 452 aa13.71□□□□□ -0.21
CD9-209ENST00000540891 CGB3P0DN86 165 aa13.71□□□□□ -0.21
CD9-209ENST00000540891 CGB7P0DN87 165 aa13.71□□□□□ -0.21
CD9-209ENST00000540891 GTF2F2P13984 249 aa13.71□□□□□ -0.21
CD9-209ENST00000540891 RELBQ01201 579 aa13.71□□□□□ -0.21
CD9-209ENST00000540891 PAX5Q02548 391 aa13.71□□□□□ -0.21
CD9-209ENST00000540891 EMX1Q04741 257 aaPredicted RBP13.71□□□□□ -0.21
CD9-209ENST00000540891 SSX1Q16384 188 aa13.71□□□□□ -0.21
CD9-209ENST00000540891 C17orf58Q2M2W7 97 aa13.71□□□□□ -0.21
CD9-209ENST00000540891 MPV17LQ2QL34 196 aa13.71□□□□□ -0.21
CD9-209ENST00000540891 AWAT2Q6E213 333 aa13.71□□□□□ -0.21
CD9-209ENST00000540891 ZNF367Q7RTV3 350 aa13.71□□□□□ -0.21
CD9-209ENST00000540891 LINC00596Q86U02 117 aa13.71□□□□□ -0.21
CD9-209ENST00000540891 TMEM104Q8NE00 496 aa13.71□□□□□ -0.21
CD9-209ENST00000540891 OR13D1Q8NGV5 346 aa13.71□□□□□ -0.21
CD9-209ENST00000540891 UQCC2Q9BRT2 126 aa13.71□□□□□ -0.21
CD9-209ENST00000540891 DPCDQ9BVM2 203 aaPredicted RBP13.71□□□□□ -0.21
CD9-209ENST00000540891 MEGF9Q9H1U4 602 aa13.71□□□□□ -0.21
CD9-209ENST00000540891 Q9H521 79 aa13.71□□□□□ -0.21
CD9-209ENST00000540891 TCF7L1Q9HCS4 588 aa13.71□□□□□ -0.21
CD9-209ENST00000540891 TAS2R3Q9NYW6 316 aa13.71□□□□□ -0.21
CD9-209ENST00000540891 CD37P11049 281 aa13.7□□□□□ -0.22
CD9-209ENST00000540891 SRMP19623 302 aa13.7□□□□□ -0.22
CD9-209ENST00000540891 GPR176Q14439 515 aa13.7□□□□□ -0.22
CD9-209ENST00000540891 HSD17B12Q53GQ0 312 aa13.7□□□□□ -0.22
CD9-209ENST00000540891 PRAMEF5Q5TYX0 476 aa13.7□□□□□ -0.22
CD9-209ENST00000540891 HEPN1Q6WQI6 88 aa13.7□□□□□ -0.22
CD9-209ENST00000540891 DYNAPQ8N1N2 210 aa13.7□□□□□ -0.22
CD9-209ENST00000540891 OR13A1Q8NGR1 328 aa13.7□□□□□ -0.22
CD9-209ENST00000540891 DYRK2Q92630 601 aa13.7□□□□□ -0.22
CD9-209ENST00000540891 TMEM133Q9H2Q1 129 aa13.7□□□□□ -0.22
CD9-209ENST00000540891 DPAGT1Q9H3H5 408 aa13.7□□□□□ -0.22
CD9-209ENST00000540891 NCOR1P1Q9H4R4 102 aa13.7□□□□□ -0.22
CD9-209ENST00000540891 BANF2Q9H503 90 aa13.7□□□□□ -0.22
CD9-209ENST00000540891 PCDHB16Q9NRJ7 776 aa13.7□□□□□ -0.22
CD9-209ENST00000540891 C1RLQ9NZP8 487 aa13.7□□□□□ -0.22
CD9-209ENST00000540891 KIF25Q9UIL4 384 aa13.7□□□□□ -0.22
CD9-209ENST00000540891 IGHV2-26A0A0B4J1V2 119 aa13.69□□□□□ -0.22
CD9-209ENST00000540891 GPR137BO60478 399 aa13.69□□□□□ -0.22
CD9-209ENST00000540891 MRPS14O60783 128 aaKnown RBP13.69□□□□□ -0.22
CD9-209ENST00000540891 ARG1P05089 322 aa13.69□□□□□ -0.22
CD9-209ENST00000540891 OMGP23515 440 aa13.69□□□□□ -0.22
CD9-209ENST00000540891 CDK2P24941 298 aa13.69□□□□□ -0.22
CD9-209ENST00000540891 CFPP27918 469 aa13.69□□□□□ -0.22
CD9-209ENST00000540891 KCNJ3P48549 501 aa13.69□□□□□ -0.22
CD9-209ENST00000540891 FABP5Q01469 135 aa13.69□□□□□ -0.22
CD9-209ENST00000540891 FOXL1Q12952 345 aa13.69□□□□□ -0.22
CD9-209ENST00000540891 TRAM1Q15629 374 aa13.69□□□□□ -0.22
CD9-209ENST00000540891 C1orf100Q5SVJ3 147 aa13.69□□□□□ -0.22
CD9-209ENST00000540891 UTF1Q5T230 341 aa13.69□□□□□ -0.22
CD9-209ENST00000540891 BRICD5Q6PL45 260 aa13.69□□□□□ -0.22
CD9-209ENST00000540891 MRPS24Q96EL2 167 aaKnown RBP13.69□□□□□ -0.22
CD9-209ENST00000540891 CYYR1Q96J86 154 aa13.69□□□□□ -0.22
CD9-209ENST00000540891 GFI1Q99684 422 aa13.69□□□□□ -0.22
CD9-209ENST00000540891 BARHL1Q9BZE3 327 aa13.69□□□□□ -0.22
CD9-209ENST00000540891 GAL3ST2Q9H3Q3 398 aa13.69□□□□□ -0.22
CD9-209ENST00000540891 OR6C3Q9NZP0 311 aa13.69□□□□□ -0.22
CD9-209ENST00000540891 RCC2Q9P258 522 aaKnown RBP13.69□□□□□ -0.22
CD9-209ENST00000540891 VPREB3Q9UKI3 123 aa13.69□□□□□ -0.22
CD9-209ENST00000540891 MEIKINA0A087WXM9 373 aa13.68□□□□□ -0.22
CD9-209ENST00000540891 ZNF729A6NN14 1252 aaPredicted RBP13.68□□□□□ -0.22
CD9-209ENST00000540891 H3BUX3 64 aa13.68□□□□□ -0.22
CD9-209ENST00000540891 MGMTP16455 207 aa13.68□□□□□ -0.22
CD9-209ENST00000540891 PSMA1P25786 263 aaKnown RBP13.68□□□□□ -0.22
CD9-209ENST00000540891 GABRA5P31644 462 aa13.68□□□□□ -0.22
CD9-209ENST00000540891 LGALS4P56470 323 aa13.68□□□□□ -0.22
CD9-209ENST00000540891 ATAD3CQ5T2N8 411 aa13.68□□□□□ -0.22
CD9-209ENST00000540891 GLT8D1Q68CQ7 371 aa13.68□□□□□ -0.22
CD9-209ENST00000540891 SPARTQ8N0X7 666 aa13.68□□□□□ -0.22
CD9-209ENST00000540891 PIFOQ8TCI5 191 aa13.68□□□□□ -0.22
CD9-209ENST00000540891 Q96M66 194 aa13.68□□□□□ -0.22
CD9-209ENST00000540891 SSX3Q99909 188 aa13.68□□□□□ -0.22
CD9-209ENST00000540891 TBL2Q9Y4P3 447 aaKnown RBP13.68□□□□□ -0.22
CD9-209ENST00000540891 TRAV39A0A0B4J263 110 aa13.67□□□□□ -0.22
CD9-209ENST00000540891 KBTBD11-OT1A0A1B0GTJ5 212 aa13.67□□□□□ -0.22
CD9-209ENST00000540891 FAM172BPA6NC97 362 aa13.67□□□□□ -0.22
CD9-209ENST00000540891 MDKP21741 143 aaPredicted RBP13.67□□□□□ -0.22
CD9-209ENST00000540891 GLP1RP43220 463 aa13.67□□□□□ -0.22
CD9-209ENST00000540891 DYNC1I2Q13409 638 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms