RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 CRISP1P54107 249 aa5.77□□□□□ -1.49
YBX3-209ENST00000540747 VBP1P61758 197 aa5.77□□□□□ -1.49
YBX3-209ENST00000540747 DGCR2P98153 550 aa5.77□□□□□ -1.49
YBX3-209ENST00000540747 ZNF146Q15072 292 aa5.77□□□□□ -1.49
YBX3-209ENST00000540747 CTF1Q16619 201 aa5.77□□□□□ -1.49
YBX3-209ENST00000540747 SMN1Q16637 294 aaKnown RBP5.77□□□□□ -1.49
YBX3-209ENST00000540747 UTF1Q5T230 341 aa5.77□□□□□ -1.49
YBX3-209ENST00000540747 UBE2UQ5VVX9 321 aa5.77□□□□□ -1.49
YBX3-209ENST00000540747 HEPN1Q6WQI6 88 aa5.77□□□□□ -1.49
YBX3-209ENST00000540747 RTN4RL2Q86UN3 420 aa5.77□□□□□ -1.49
YBX3-209ENST00000540747 TPRX1Q8N7U7 411 aa5.77□□□□□ -1.49
YBX3-209ENST00000540747 MINDY2Q8NBR6 621 aa5.77□□□□□ -1.49
YBX3-209ENST00000540747 OR51D1Q8NGF3 324 aa5.77□□□□□ -1.49
YBX3-209ENST00000540747 OR6Q1Q8NGQ2 317 aa5.77□□□□□ -1.49
YBX3-209ENST00000540747 MCFD2Q8NI22 146 aa5.77□□□□□ -1.49
YBX3-209ENST00000540747 CHPT1Q8WUD6 406 aa5.77□□□□□ -1.49
YBX3-209ENST00000540747 ASB17Q8WXJ9 295 aa5.77□□□□□ -1.49
YBX3-209ENST00000540747 GGHQ92820 318 aa5.77□□□□□ -1.49
YBX3-209ENST00000540747 CORO2AQ92828 525 aa5.77□□□□□ -1.49
YBX3-209ENST00000540747 OTULINQ96BN8 352 aa5.77□□□□□ -1.49
YBX3-209ENST00000540747 CEP19Q96LK0 163 aa5.77□□□□□ -1.49
YBX3-209ENST00000540747 MROQ9BYG7 248 aa5.77□□□□□ -1.49
YBX3-209ENST00000540747 MOB1AQ9H8S9 216 aa5.77□□□□□ -1.49
YBX3-209ENST00000540747 SLC25A19Q9HC21 320 aa5.77□□□□□ -1.49
YBX3-209ENST00000540747 PSORS1C1Q9UIG5 152 aa5.77□□□□□ -1.49
YBX3-209ENST00000540747 DAPK2Q9UIK4 370 aa5.77□□□□□ -1.49
YBX3-209ENST00000540747 UBE2J1Q9Y385 318 aaPredicted RBP5.77□□□□□ -1.49
YBX3-209ENST00000540747 R4GMQ9 66 aa5.77□□□□□ -1.49
YBX3-209ENST00000540747 PSMB11A5LHX3 300 aa5.76□□□□□ -1.49
YBX3-209ENST00000540747 OOSP1A8MZH6 123 aa5.76□□□□□ -1.49
YBX3-209ENST00000540747 H3BN98 237 aa5.76□□□□□ -1.49
YBX3-209ENST00000540747 MGST3O14880 152 aa5.76□□□□□ -1.49
YBX3-209ENST00000540747 ENTPD6O75354 484 aa5.76□□□□□ -1.49
YBX3-209ENST00000540747 SULT1C4O75897 302 aa5.76□□□□□ -1.49
YBX3-209ENST00000540747 HAND1O96004 215 aa5.76□□□□□ -1.49
YBX3-209ENST00000540747 OSMP13725 252 aa5.76□□□□□ -1.49
YBX3-209ENST00000540747 EPHA2P29317 976 aa5.76□□□□□ -1.49
YBX3-209ENST00000540747 BRS3P32247 399 aa5.76□□□□□ -1.49
YBX3-209ENST00000540747 S100A5P33763 92 aa5.76□□□□□ -1.49
YBX3-209ENST00000540747 OR3A4PP47883 348 aa5.76□□□□□ -1.49
YBX3-209ENST00000540747 BCAP31P51572 246 aa5.76□□□□□ -1.49
YBX3-209ENST00000540747 RIDAP52758 137 aaKnown RBP5.76□□□□□ -1.49
YBX3-209ENST00000540747 P2RX3P56373 397 aa5.76□□□□□ -1.49
YBX3-209ENST00000540747 EDDM3AQ14507 147 aa5.76□□□□□ -1.49
YBX3-209ENST00000540747 UBE2V2Q15819 145 aa5.76□□□□□ -1.49
YBX3-209ENST00000540747 GRK1Q15835 563 aa5.76□□□□□ -1.49
YBX3-209ENST00000540747 HLA-DRB5Q30154 266 aa5.76□□□□□ -1.49
YBX3-209ENST00000540747 KHDC1LQ5JSQ8 128 aa5.76□□□□□ -1.49
YBX3-209ENST00000540747 CASC10Q5T4H9 136 aa5.76□□□□□ -1.49
YBX3-209ENST00000540747 TPTE2P1Q5T6R2 138 aa5.76□□□□□ -1.49
YBX3-209ENST00000540747 PRAMEF5Q5TYX0 476 aa5.76□□□□□ -1.49
YBX3-209ENST00000540747 C8orf86Q6ZUL3 223 aa5.76□□□□□ -1.49
YBX3-209ENST00000540747 ZNF329Q86UD4 541 aa5.76□□□□□ -1.49
YBX3-209ENST00000540747 COMMD2Q86X83 199 aa5.76□□□□□ -1.49
YBX3-209ENST00000540747 THNSL2Q86YJ6 484 aa5.76□□□□□ -1.49
YBX3-209ENST00000540747 ABHD12Q8N2K0 398 aa5.76□□□□□ -1.49
YBX3-209ENST00000540747 SLAMF9Q96A28 289 aa5.76□□□□□ -1.49
YBX3-209ENST00000540747 RAX2Q96IS3 184 aa5.76□□□□□ -1.49
YBX3-209ENST00000540747 ZNF649Q9BS31 505 aa5.76□□□□□ -1.49
YBX3-209ENST00000540747 CHST6Q9GZX3 395 aa5.76□□□□□ -1.49
YBX3-209ENST00000540747 DCSTAMPQ9H295 470 aa5.76□□□□□ -1.49
YBX3-209ENST00000540747 ZNF286AQ9HBT8 521 aa5.76□□□□□ -1.49
YBX3-209ENST00000540747 ZFP57Q9NU63 452 aa5.76□□□□□ -1.49
YBX3-209ENST00000540747 MRM2Q9UI43 246 aaKnown RBP5.76□□□□□ -1.49
YBX3-209ENST00000540747 MOB4Q9Y3A3 225 aa5.76□□□□□ -1.49
YBX3-209ENST00000540747 TMEM14AQ9Y6G1 99 aa5.76□□□□□ -1.49
YBX3-209ENST00000540747 KIAA2026Q5HYC2 2103 aa5.75□□□□□ -1.49
YBX3-209ENST00000540747 TRBV2A0A0J9YWF9 115 aa5.75□□□□□ -1.49
YBX3-209ENST00000540747 A0A1W2PPI3 338 aa5.75□□□□□ -1.49
YBX3-209ENST00000540747 A6NIN4 97 aa5.75□□□□□ -1.49
YBX3-209ENST00000540747 LEUTXA8MZ59 168 aa5.75□□□□□ -1.49
YBX3-209ENST00000540747 LOC110117498-PIK3R3F6TDL0 507 aa5.75□□□□□ -1.49
YBX3-209ENST00000540747 BUB1B-PAK6H3BSN5 160 aa5.75□□□□□ -1.49
YBX3-209ENST00000540747 H3BUI4 141 aa5.75□□□□□ -1.49
YBX3-209ENST00000540747 MAGEB4O15481 346 aaPredicted RBP5.75□□□□□ -1.49
YBX3-209ENST00000540747 RAMP3O60896 148 aa5.75□□□□□ -1.49
YBX3-209ENST00000540747 SNRNP70P08621 437 aaKnown RBP5.75□□□□□ -1.49
YBX3-209ENST00000540747 MRPL3P09001 348 aaKnown RBP5.75□□□□□ -1.49
YBX3-209ENST00000540747 CGB3P0DN86 165 aa5.75□□□□□ -1.49
YBX3-209ENST00000540747 CGB7P0DN87 165 aa5.75□□□□□ -1.49
YBX3-209ENST00000540747 DBTP11182 482 aaKnown RBP5.75□□□□□ -1.49
YBX3-209ENST00000540747 CDK2P24941 298 aa5.75□□□□□ -1.49
YBX3-209ENST00000540747 LMO1P25800 156 aa5.75□□□□□ -1.49
YBX3-209ENST00000540747 NPBWR2P48146 333 aa5.75□□□□□ -1.49
YBX3-209ENST00000540747 LUMP51884 338 aaPredicted RBP5.75□□□□□ -1.49
YBX3-209ENST00000540747 NCS1P62166 190 aa5.75□□□□□ -1.49
YBX3-209ENST00000540747 EFNB1P98172 346 aa5.75□□□□□ -1.49
YBX3-209ENST00000540747 ST3GAL4Q11206 333 aa5.75□□□□□ -1.49
YBX3-209ENST00000540747 PTGES3Q15185 160 aaKnown RBP5.75□□□□□ -1.49
YBX3-209ENST00000540747 TBCEQ15813 527 aaPredicted RBP5.75□□□□□ -1.49
YBX3-209ENST00000540747 TIMM50Q3ZCQ8 353 aa5.75□□□□□ -1.49
YBX3-209ENST00000540747 BCL2L15Q5TBC7 163 aa5.75□□□□□ -1.49
YBX3-209ENST00000540747 TMEM236Q5W0B7 351 aa5.75□□□□□ -1.49
YBX3-209ENST00000540747 OR52W1Q6IF63 320 aa5.75□□□□□ -1.49
YBX3-209ENST00000540747 ZNF322Q6U7Q0 402 aaPredicted RBP5.75□□□□□ -1.49
YBX3-209ENST00000540747 PLEKHG7Q6ZR37 379 aa5.75□□□□□ -1.49
YBX3-209ENST00000540747 SLC25A26Q70HW3 274 aa5.75□□□□□ -1.49
YBX3-209ENST00000540747 ZNF367Q7RTV3 350 aa5.75□□□□□ -1.49
YBX3-209ENST00000540747 C5orf56Q8N8D9 126 aa5.75□□□□□ -1.49
YBX3-209ENST00000540747 RNF152Q8N8N0 203 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms