RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 ACANP16112 2415 aa8.74□□□□□ -1.01
VPS33A-204ENST00000540669 NSD1Q96L73 2696 aaPredicted RBP8.74□□□□□ -1.01
VPS33A-204ENST00000540669 NKX6-3A6NJ46 265 aa8.74□□□□□ -1.01
VPS33A-204ENST00000540669 SIRPB1O00241 398 aa8.74□□□□□ -1.01
VPS33A-204ENST00000540669 SH2D1BO14796 132 aa8.74□□□□□ -1.01
VPS33A-204ENST00000540669 MGST3O14880 152 aa8.74□□□□□ -1.01
VPS33A-204ENST00000540669 CGB3P0DN86 165 aa8.74□□□□□ -1.01
VPS33A-204ENST00000540669 CGB7P0DN87 165 aa8.74□□□□□ -1.01
VPS33A-204ENST00000540669 BLVRBP30043 206 aaPredicted RBP8.74□□□□□ -1.01
VPS33A-204ENST00000540669 PITPNBP48739 271 aa8.74□□□□□ -1.01
VPS33A-204ENST00000540669 GMFBP60983 142 aa8.74□□□□□ -1.01
VPS33A-204ENST00000540669 SEC61A1P61619 476 aaKnown RBP8.74□□□□□ -1.01
VPS33A-204ENST00000540669 LOXL1Q08397 574 aaPredicted RBP8.74□□□□□ -1.01
VPS33A-204ENST00000540669 LSAMPQ13449 338 aa8.74□□□□□ -1.01
VPS33A-204ENST00000540669 ARL6IP1Q15041 203 aa8.74□□□□□ -1.01
VPS33A-204ENST00000540669 PNLIPRP3Q17RR3 467 aa8.74□□□□□ -1.01
VPS33A-204ENST00000540669 HACD4Q5VWC8 232 aa8.74□□□□□ -1.01
VPS33A-204ENST00000540669 OLFML2AQ68BL7 652 aa8.74□□□□□ -1.01
VPS33A-204ENST00000540669 LIAT1Q6ZQX7 453 aa8.74□□□□□ -1.01
VPS33A-204ENST00000540669 SLC36A1Q7Z2H8 476 aa8.74□□□□□ -1.01
VPS33A-204ENST00000540669 PEG10Q86TG7 708 aaKnown RBP8.74□□□□□ -1.01
VPS33A-204ENST00000540669 FGFRL1Q8N441 504 aa8.74□□□□□ -1.01
VPS33A-204ENST00000540669 ZNRF1Q8ND25 227 aa8.74□□□□□ -1.01
VPS33A-204ENST00000540669 GPX8Q8TED1 209 aa8.74□□□□□ -1.01
VPS33A-204ENST00000540669 DYRK2Q92630 601 aa8.74□□□□□ -1.01
VPS33A-204ENST00000540669 TRIM63Q969Q1 353 aa8.74□□□□□ -1.01
VPS33A-204ENST00000540669 RAB3CQ96E17 227 aa8.74□□□□□ -1.01
VPS33A-204ENST00000540669 NEIL1Q96FI4 390 aaPredicted RBP8.74□□□□□ -1.01
VPS33A-204ENST00000540669 S100A16Q96FQ6 103 aaKnown RBP8.74□□□□□ -1.01
VPS33A-204ENST00000540669 DMRTB1Q96MA1 342 aa8.74□□□□□ -1.01
VPS33A-204ENST00000540669 ABHD1Q96SE0 405 aa8.74□□□□□ -1.01
VPS33A-204ENST00000540669 SDHCQ99643 169 aaPredicted RBP8.74□□□□□ -1.01
VPS33A-204ENST00000540669 SRRQ9GZT4 340 aa8.74□□□□□ -1.01
VPS33A-204ENST00000540669 ATG5Q9H1Y0 275 aa8.74□□□□□ -1.01
VPS33A-204ENST00000540669 EXTL2Q9UBQ6 330 aa8.74□□□□□ -1.01
VPS33A-204ENST00000540669 MIOXQ9UGB7 285 aa8.74□□□□□ -1.01
VPS33A-204ENST00000540669 TRBV23-1A0A0A0MS06 115 aa8.73□□□□□ -1.01
VPS33A-204ENST00000540669 A0A0G2JMP0 313 aa8.73□□□□□ -1.01
VPS33A-204ENST00000540669 A0A0X1KG70 313 aa8.73□□□□□ -1.01
VPS33A-204ENST00000540669 TMEM235A6NFC5 223 aa8.73□□□□□ -1.01
VPS33A-204ENST00000540669 DEGS1O15121 323 aa8.73□□□□□ -1.01
VPS33A-204ENST00000540669 ADAM20O43506 726 aa8.73□□□□□ -1.01
VPS33A-204ENST00000540669 GSTZ1O43708 216 aaPredicted RBP8.73□□□□□ -1.01
VPS33A-204ENST00000540669 ZNF44P15621 663 aa8.73□□□□□ -1.01
VPS33A-204ENST00000540669 NAT1P18440 290 aa8.73□□□□□ -1.01
VPS33A-204ENST00000540669 NPY4RP50391 375 aa8.73□□□□□ -1.01
VPS33A-204ENST00000540669 SNU13P55769 128 aaKnown RBP8.73□□□□□ -1.01
VPS33A-204ENST00000540669 DLX6P56179 175 aa8.73□□□□□ -1.01
VPS33A-204ENST00000540669 P2RX3P56373 397 aa8.73□□□□□ -1.01
VPS33A-204ENST00000540669 PDCD1Q15116 288 aa8.73□□□□□ -1.01
VPS33A-204ENST00000540669 CARTPTQ16568 116 aa8.73□□□□□ -1.01
VPS33A-204ENST00000540669 SRSF7Q16629 238 aaKnown RBP eCLIP8.73□□□□□ -1.01
VPS33A-204ENST00000540669 PAN3Q58A45 887 aaKnown RBP8.73□□□□□ -1.01
VPS33A-204ENST00000540669 TMEM69Q5SWH9 247 aa8.73□□□□□ -1.01
VPS33A-204ENST00000540669 WDR25Q64LD2 544 aaPredicted RBP8.73□□□□□ -1.01
VPS33A-204ENST00000540669 SLC35E4Q6ICL7 350 aa8.73□□□□□ -1.01
VPS33A-204ENST00000540669 PYHIN1Q6K0P9 492 aa8.73□□□□□ -1.01
VPS33A-204ENST00000540669 ZNF554Q86TJ5 538 aa8.73□□□□□ -1.01
VPS33A-204ENST00000540669 BOLLQ8N9W6 283 aaKnown RBP8.73□□□□□ -1.01
VPS33A-204ENST00000540669 LY6G5BQ8NDX9 201 aa8.73□□□□□ -1.01
VPS33A-204ENST00000540669 DEFB108BQ8NET1 73 aa8.73□□□□□ -1.01
VPS33A-204ENST00000540669 OR4M2Q8NGB6 313 aa8.73□□□□□ -1.01
VPS33A-204ENST00000540669 MRPL30Q8TCC3 161 aaKnown RBP8.73□□□□□ -1.01
VPS33A-204ENST00000540669 SMIM4Q8WVI0 70 aa8.73□□□□□ -1.01
VPS33A-204ENST00000540669 MED30Q96HR3 178 aa8.73□□□□□ -1.01
VPS33A-204ENST00000540669 C18orf12Q96KH6 178 aa8.73□□□□□ -1.01
VPS33A-204ENST00000540669 PPA2Q9H2U2 334 aa8.73□□□□□ -1.01
VPS33A-204ENST00000540669 SCPEP1Q9HB40 452 aa8.73□□□□□ -1.01
VPS33A-204ENST00000540669 C12orf4Q9NQ89 552 aa8.73□□□□□ -1.01
VPS33A-204ENST00000540669 OR14J1Q9UGF5 321 aa8.73□□□□□ -1.01
VPS33A-204ENST00000540669 ELF5Q9UKW6 265 aaPredicted RBP8.73□□□□□ -1.01
VPS33A-204ENST00000540669 MXRA5Q9NR99 2828 aa8.73□□□□□ -1.01
VPS33A-204ENST00000540669 TRAV18A0A075B6X5 111 aa8.72□□□□□ -1.01
VPS33A-204ENST00000540669 PPIAL4CA0A0B4J2A2 164 aa8.72□□□□□ -1.01
VPS33A-204ENST00000540669 C22orf46C9J442 243 aa8.72□□□□□ -1.01
VPS33A-204ENST00000540669 SULT1C2O00338 296 aa8.72□□□□□ -1.01
VPS33A-204ENST00000540669 DVL1O14640 695 aa8.72□□□□□ -1.01
VPS33A-204ENST00000540669 TMPRSS2O15393 492 aa8.72□□□□□ -1.01
VPS33A-204ENST00000540669 RGS5O15539 181 aa8.72□□□□□ -1.01
VPS33A-204ENST00000540669 HEXAP06865 529 aa8.72□□□□□ -1.01
VPS33A-204ENST00000540669 RPS2P15880 293 aaKnown RBP8.72□□□□□ -1.01
VPS33A-204ENST00000540669 GNB3P16520 340 aa8.72□□□□□ -1.01
VPS33A-204ENST00000540669 DTYMKP23919 212 aa8.72□□□□□ -1.01
VPS33A-204ENST00000540669 IL2RGP31785 369 aa8.72□□□□□ -1.01
VPS33A-204ENST00000540669 MRPS10P82664 201 aaKnown RBP8.72□□□□□ -1.01
VPS33A-204ENST00000540669 RBM39Q14498 530 aaKnown RBP8.72□□□□□ -1.01
VPS33A-204ENST00000540669 LINC01559Q495D7 138 aa8.72□□□□□ -1.01
VPS33A-204ENST00000540669 Q6ZTK2 550 aa8.72□□□□□ -1.01
VPS33A-204ENST00000540669 WFDC11Q8NEX6 87 aa8.72□□□□□ -1.01
VPS33A-204ENST00000540669 CORO2AQ92828 525 aa8.72□□□□□ -1.01
VPS33A-204ENST00000540669 GCDHQ92947 438 aaPredicted RBP8.72□□□□□ -1.01
VPS33A-204ENST00000540669 DIRAS2Q96HU8 199 aa8.72□□□□□ -1.01
VPS33A-204ENST00000540669 DIABLOQ9NR28 239 aa8.72□□□□□ -1.01
VPS33A-204ENST00000540669 SLC25A10Q9UBX3 287 aaPredicted RBP8.72□□□□□ -1.01
VPS33A-204ENST00000540669 GLS2Q9UI32 602 aa8.72□□□□□ -1.01
VPS33A-204ENST00000540669 AK3Q9UIJ7 227 aa8.72□□□□□ -1.01
VPS33A-204ENST00000540669 ARHGAP32A7KAX9 2087 aa8.71□□□□□ -1.01
VPS33A-204ENST00000540669 ODAMA1E959 279 aa8.71□□□□□ -1.02
VPS33A-204ENST00000540669 MEIOCA2RUB1 952 aa8.71□□□□□ -1.02
VPS33A-204ENST00000540669 GABARAPH6UMI1 98 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms