RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 SNRNP70P08621 437 aaKnown RBP9.5□□□□□ -0.89
CBX3P4-202ENST00000540428 RPSAP08865 295 aaKnown RBP9.5□□□□□ -0.89
CBX3P4-202ENST00000540428 HTR1AP08908 422 aa9.5□□□□□ -0.89
CBX3P4-202ENST00000540428 NFYBP25208 207 aa9.5□□□□□ -0.89
CBX3P4-202ENST00000540428 C21orf33P30042 268 aaPredicted RBP9.5□□□□□ -0.89
CBX3P4-202ENST00000540428 MTNR1BP49286 362 aa9.5□□□□□ -0.89
CBX3P4-202ENST00000540428 RAB7AP51149 207 aa9.5□□□□□ -0.89
CBX3P4-202ENST00000540428 ZP1P60852 638 aa9.5□□□□□ -0.89
CBX3P4-202ENST00000540428 SLC35B1P78383 322 aa9.5□□□□□ -0.89
CBX3P4-202ENST00000540428 PAX5Q02548 391 aa9.5□□□□□ -0.89
CBX3P4-202ENST00000540428 SCN1BQ07699 218 aa9.5□□□□□ -0.89
CBX3P4-202ENST00000540428 BNIP1Q12981 228 aa9.5□□□□□ -0.89
CBX3P4-202ENST00000540428 ATXN7L3Q14CW9 347 aaPredicted RBP9.5□□□□□ -0.89
CBX3P4-202ENST00000540428 CDK5R1Q15078 307 aa9.5□□□□□ -0.89
CBX3P4-202ENST00000540428 SLC25A30Q5SVS4 291 aa9.5□□□□□ -0.89
CBX3P4-202ENST00000540428 UNQ9370/PRO34162Q6UXP9 181 aa9.5□□□□□ -0.89
CBX3P4-202ENST00000540428 SLC16A12Q6ZSM3 486 aa9.5□□□□□ -0.89
CBX3P4-202ENST00000540428 ZNF329Q86UD4 541 aa9.5□□□□□ -0.89
CBX3P4-202ENST00000540428 OR8H3Q8N146 312 aa9.5□□□□□ -0.89
CBX3P4-202ENST00000540428 OR10A7Q8NGE5 316 aa9.5□□□□□ -0.89
CBX3P4-202ENST00000540428 OR13C3Q8NGS6 347 aa9.5□□□□□ -0.89
CBX3P4-202ENST00000540428 OR56B4Q8NH76 319 aa9.5□□□□□ -0.89
CBX3P4-202ENST00000540428 HAVCR2Q8TDQ0 301 aa9.5□□□□□ -0.89
CBX3P4-202ENST00000540428 HRASLS5Q96KN8 279 aa9.5□□□□□ -0.89
CBX3P4-202ENST00000540428 SPACA5Q96QH8 159 aa9.5□□□□□ -0.89
CBX3P4-202ENST00000540428 MYCBPQ99417 103 aaPredicted RBP9.5□□□□□ -0.89
CBX3P4-202ENST00000540428 P2RX4Q99571 388 aa9.5□□□□□ -0.89
CBX3P4-202ENST00000540428 OSBPL10Q9BXB5 764 aa9.5□□□□□ -0.89
CBX3P4-202ENST00000540428 PPIL3Q9H2H8 161 aaKnown RBP9.5□□□□□ -0.89
CBX3P4-202ENST00000540428 RIBC2Q9H4K1 309 aa9.5□□□□□ -0.89
CBX3P4-202ENST00000540428 CALYQ9NYX4 217 aa9.5□□□□□ -0.89
CBX3P4-202ENST00000540428 MYRFQ9Y2G1 1151 aa9.5□□□□□ -0.89
CBX3P4-202ENST00000540428 NBEAL2Q6ZNJ1 2754 aa9.49□□□□□ -0.89
CBX3P4-202ENST00000540428 DAPL1A0PJW8 107 aa9.49□□□□□ -0.89
CBX3P4-202ENST00000540428 OR4C45A6NMZ5 311 aa9.49□□□□□ -0.89
CBX3P4-202ENST00000540428 NPIPB11E5RHQ5 1161 aa9.49□□□□□ -0.89
CBX3P4-202ENST00000540428 H0YHG0 523 aa9.49□□□□□ -0.89
CBX3P4-202ENST00000540428 H0YJX3 145 aa9.49□□□□□ -0.89
CBX3P4-202ENST00000540428 IGHG2P01859 326 aa9.49□□□□□ -0.89
CBX3P4-202ENST00000540428 TMEM11P17152 192 aa9.49□□□□□ -0.89
CBX3P4-202ENST00000540428 GLP1RP43220 463 aa9.49□□□□□ -0.89
CBX3P4-202ENST00000540428 KCNJ3P48549 501 aa9.49□□□□□ -0.89
CBX3P4-202ENST00000540428 GP2P55259 537 aaKnown RBP9.49□□□□□ -0.89
CBX3P4-202ENST00000540428 MADCAM1Q13477 382 aa9.49□□□□□ -0.89
CBX3P4-202ENST00000540428 ALKBH1Q13686 389 aaKnown RBP9.49□□□□□ -0.89
CBX3P4-202ENST00000540428 HES1Q14469 280 aa9.49□□□□□ -0.89
CBX3P4-202ENST00000540428 KISS1Q15726 138 aa9.49□□□□□ -0.89
CBX3P4-202ENST00000540428 UTF1Q5T230 341 aa9.49□□□□□ -0.89
CBX3P4-202ENST00000540428 ELP2Q6IA86 826 aa9.49□□□□□ -0.89
CBX3P4-202ENST00000540428 C8orf86Q6ZUL3 223 aa9.49□□□□□ -0.89
CBX3P4-202ENST00000540428 RNF144BQ7Z419 303 aa9.49□□□□□ -0.89
CBX3P4-202ENST00000540428 AMIGO2Q86SJ2 522 aa9.49□□□□□ -0.89
CBX3P4-202ENST00000540428 DRAM1Q8N682 238 aa9.49□□□□□ -0.89
CBX3P4-202ENST00000540428 PXT1Q8NFP0 134 aa9.49□□□□□ -0.89
CBX3P4-202ENST00000540428 OR51A4Q8NGJ6 313 aa9.49□□□□□ -0.89
CBX3P4-202ENST00000540428 OR10AC1Q8NH08 325 aa9.49□□□□□ -0.89
CBX3P4-202ENST00000540428 RNFT2Q96EX2 444 aa9.49□□□□□ -0.89
CBX3P4-202ENST00000540428 CPNE2Q96FN4 548 aaPredicted RBP9.49□□□□□ -0.89
CBX3P4-202ENST00000540428 MRPL48Q96GC5 212 aaKnown RBP9.49□□□□□ -0.89
CBX3P4-202ENST00000540428 BARHL1Q9BZE3 327 aa9.49□□□□□ -0.89
CBX3P4-202ENST00000540428 ING3Q9NXR8 418 aa9.49□□□□□ -0.89
CBX3P4-202ENST00000540428 IDI2-AS1Q9NZ38 188 aa9.49□□□□□ -0.89
CBX3P4-202ENST00000540428 PSG11Q9UQ72 335 aa9.49□□□□□ -0.89
CBX3P4-202ENST00000540428 MEIKINA0A087WXM9 373 aa9.48□□□□□ -0.89
CBX3P4-202ENST00000540428 SNTNA6NMZ2 147 aa9.48□□□□□ -0.89
CBX3P4-202ENST00000540428 SERPINE3A8MV23 424 aa9.48□□□□□ -0.89
CBX3P4-202ENST00000540428 NUDT19A8MXV4 375 aa9.48□□□□□ -0.89
CBX3P4-202ENST00000540428 SULT1B1O43704 296 aa9.48□□□□□ -0.89
CBX3P4-202ENST00000540428 RAMP3O60896 148 aa9.48□□□□□ -0.89
CBX3P4-202ENST00000540428 HCKP08631 526 aa9.48□□□□□ -0.89
CBX3P4-202ENST00000540428 NHLRC4P0CG21 123 aaPredicted RBP9.48□□□□□ -0.89
CBX3P4-202ENST00000540428 TMEM225BP0DP42 221 aa9.48□□□□□ -0.89
CBX3P4-202ENST00000540428 DGCR2P98153 550 aa9.48□□□□□ -0.89
CBX3P4-202ENST00000540428 EBI3Q14213 229 aa9.48□□□□□ -0.89
CBX3P4-202ENST00000540428 IL13RA2Q14627 380 aa9.48□□□□□ -0.89
CBX3P4-202ENST00000540428 PAN3Q58A45 887 aaKnown RBP9.48□□□□□ -0.89
CBX3P4-202ENST00000540428 MEDAGQ5VYS4 303 aa9.48□□□□□ -0.89
CBX3P4-202ENST00000540428 SLC35E3Q7Z769 313 aa9.48□□□□□ -0.89
CBX3P4-202ENST00000540428 ZNF695Q8IW36 515 aa9.48□□□□□ -0.89
CBX3P4-202ENST00000540428 SERPINA12Q8IW75 414 aa9.48□□□□□ -0.89
CBX3P4-202ENST00000540428 FOXRED2Q8IWF2 684 aa9.48□□□□□ -0.89
CBX3P4-202ENST00000540428 PARP16Q8N5Y8 322 aa9.48□□□□□ -0.89
CBX3P4-202ENST00000540428 ACBD7Q8N6N7 88 aa9.48□□□□□ -0.89
CBX3P4-202ENST00000540428 KLHL30-AS1Q8NEE0 82 aa9.48□□□□□ -0.89
CBX3P4-202ENST00000540428 OR5D14Q8NGL3 314 aa9.48□□□□□ -0.89
CBX3P4-202ENST00000540428 OR13A1Q8NGR1 328 aa9.48□□□□□ -0.89
CBX3P4-202ENST00000540428 PELI1Q96FA3 418 aa9.48□□□□□ -0.89
CBX3P4-202ENST00000540428 CENPNQ96H22 339 aaPredicted RBP9.48□□□□□ -0.89
CBX3P4-202ENST00000540428 NOL4LQ96MY1 436 aaPredicted RBP9.48□□□□□ -0.89
CBX3P4-202ENST00000540428 IMPAD1Q9NX62 359 aa9.48□□□□□ -0.89
CBX3P4-202ENST00000540428 KIF25Q9UIL4 384 aa9.48□□□□□ -0.89
CBX3P4-202ENST00000540428 OAZ3Q9UMX2 235 aa9.48□□□□□ -0.89
CBX3P4-202ENST00000540428 TRAV24A0A0B4J272 114 aa9.47□□□□□ -0.89
CBX3P4-202ENST00000540428 J3QLW9 94 aa9.47□□□□□ -0.89
CBX3P4-202ENST00000540428 VSIG8P0DPA2 414 aa9.47□□□□□ -0.89
CBX3P4-202ENST00000540428 ZNF19P17023 458 aa9.47□□□□□ -0.89
CBX3P4-202ENST00000540428 SNRPGP62308 76 aaKnown RBP9.47□□□□□ -0.89
CBX3P4-202ENST00000540428 ZNF816Q0VGE8 651 aaPredicted RBP9.47□□□□□ -0.89
CBX3P4-202ENST00000540428 MRPL28Q13084 256 aaKnown RBP9.47□□□□□ -0.89
CBX3P4-202ENST00000540428 ZNF691Q5VV52 312 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms