RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 Q5PR19 223 aa15.73■□□□□ 0.11
TNFRSF1A-213ENST00000540022 FGFRL1Q8N441 504 aa15.73■□□□□ 0.11
TNFRSF1A-213ENST00000540022 SPICQ8N5J4 248 aa15.73■□□□□ 0.11
TNFRSF1A-213ENST00000540022 WFDC11Q8NEX6 87 aa15.73■□□□□ 0.11
TNFRSF1A-213ENST00000540022 TMEM185AQ8NFB2 350 aa15.73■□□□□ 0.11
TNFRSF1A-213ENST00000540022 PLPPR1Q8TBJ4 325 aa15.73■□□□□ 0.11
TNFRSF1A-213ENST00000540022 MED30Q96HR3 178 aa15.73■□□□□ 0.11
TNFRSF1A-213ENST00000540022 TK1P04183 234 aa15.73■□□□□ 0.11
TNFRSF1A-213ENST00000540022 MELTFP08582 738 aa15.73■□□□□ 0.11
TNFRSF1A-213ENST00000540022 CD99P14209 185 aa15.73■□□□□ 0.11
TNFRSF1A-213ENST00000540022 RBM39Q14498 530 aaKnown RBP15.73■□□□□ 0.11
TNFRSF1A-213ENST00000540022 ATXN7L3Q14CW9 347 aaPredicted RBP15.73■□□□□ 0.11
TNFRSF1A-213ENST00000540022 ARL6IP1Q15041 203 aa15.73■□□□□ 0.11
TNFRSF1A-213ENST00000540022 PYHIN1Q6K0P9 492 aa15.73■□□□□ 0.11
TNFRSF1A-213ENST00000540022 BAIAP2L2Q6UXY1 529 aa15.73■□□□□ 0.11
TNFRSF1A-213ENST00000540022 AK3Q9UIJ7 227 aa15.73■□□□□ 0.11
TNFRSF1A-213ENST00000540022 SERPINE3A8MV23 424 aa15.72■□□□□ 0.11
TNFRSF1A-213ENST00000540022 TPPPO94811 219 aa15.72■□□□□ 0.11
TNFRSF1A-213ENST00000540022 WNT2P09544 360 aa15.72■□□□□ 0.11
TNFRSF1A-213ENST00000540022 RPS2P15880 293 aaKnown RBP15.72■□□□□ 0.11
TNFRSF1A-213ENST00000540022 ZNF45Q02386 682 aa15.72■□□□□ 0.11
TNFRSF1A-213ENST00000540022 GUCA2AQ02747 115 aa15.72■□□□□ 0.11
TNFRSF1A-213ENST00000540022 GRK1Q15835 563 aa15.72■□□□□ 0.11
TNFRSF1A-213ENST00000540022 HACD4Q5VWC8 232 aa15.72■□□□□ 0.11
TNFRSF1A-213ENST00000540022 SHEQ5VZ18 495 aa15.72■□□□□ 0.11
TNFRSF1A-213ENST00000540022 OR8H2Q8N162 312 aa15.72■□□□□ 0.11
TNFRSF1A-213ENST00000540022 PPP1R35Q8TAP8 253 aa15.72■□□□□ 0.11
TNFRSF1A-213ENST00000540022 NUDCD2Q8WVJ2 157 aa15.72■□□□□ 0.11
TNFRSF1A-213ENST00000540022 S100ZQ8WXG8 99 aa15.72■□□□□ 0.11
TNFRSF1A-213ENST00000540022 HDHD3Q9BSH5 251 aaPredicted RBP15.72■□□□□ 0.11
TNFRSF1A-213ENST00000540022 FAM234AQ9H0X4 552 aa15.72■□□□□ 0.11
TNFRSF1A-213ENST00000540022 PATZ1Q9HBE1 687 aaKnown RBP15.72■□□□□ 0.11
TNFRSF1A-213ENST00000540022 ING3Q9NXR8 418 aa15.72■□□□□ 0.11
TNFRSF1A-213ENST00000540022 ETAA1Q9NY74 926 aa15.72■□□□□ 0.11
TNFRSF1A-213ENST00000540022 MIOXQ9UGB7 285 aa15.72■□□□□ 0.11
TNFRSF1A-213ENST00000540022 PCDHB10Q9UN67 800 aa15.72■□□□□ 0.11
TNFRSF1A-213ENST00000540022 MEIOCA2RUB1 952 aa15.71■□□□□ 0.11
TNFRSF1A-213ENST00000540022 DVL1O14640 695 aa15.71■□□□□ 0.11
TNFRSF1A-213ENST00000540022 CSN2P05814 226 aa15.71■□□□□ 0.11
TNFRSF1A-213ENST00000540022 ZNF841Q6ZN19 808 aa15.71■□□□□ 0.11
TNFRSF1A-213ENST00000540022 COQ2Q96H96 371 aa15.71■□□□□ 0.11
TNFRSF1A-213ENST00000540022 TSC22D3Q99576 134 aa15.71■□□□□ 0.11
TNFRSF1A-213ENST00000540022 CMSS1Q9BQ75 279 aaKnown RBP15.71■□□□□ 0.11
TNFRSF1A-213ENST00000540022 RABL2AQ9UBK7 228 aaPredicted RBP15.71■□□□□ 0.11
TNFRSF1A-213ENST00000540022 SLC25A10Q9UBX3 287 aaPredicted RBP15.71■□□□□ 0.11
TNFRSF1A-213ENST00000540022 RABL2BQ9UNT1 228 aa15.71■□□□□ 0.11
TNFRSF1A-213ENST00000540022 F5H0A9 414 aaPredicted RBP15.7■□□□□ 0.1
TNFRSF1A-213ENST00000540022 MGST3O14880 152 aa15.7■□□□□ 0.1
TNFRSF1A-213ENST00000540022 NDUFB3O43676 98 aa15.7■□□□□ 0.1
TNFRSF1A-213ENST00000540022 SSX5O60225 188 aa15.7■□□□□ 0.1
TNFRSF1A-213ENST00000540022 PTBP1P26599 531 aaKnown RBP eCLIP15.7■□□□□ 0.11e-7■■■□□ 14.7
TNFRSF1A-213ENST00000540022 PRSS3P35030 304 aa15.7■□□□□ 0.1
TNFRSF1A-213ENST00000540022 KCNJ3P48549 501 aa15.7■□□□□ 0.1
TNFRSF1A-213ENST00000540022 PITPNAQ00169 270 aa15.7■□□□□ 0.1
TNFRSF1A-213ENST00000540022 AESQ08117 197 aa15.7■□□□□ 0.1
TNFRSF1A-213ENST00000540022 ARFRP1Q13795 201 aa15.7■□□□□ 0.1
TNFRSF1A-213ENST00000540022 PNLIPRP3Q17RR3 467 aa15.7■□□□□ 0.1
TNFRSF1A-213ENST00000540022 RNASE12Q5GAN4 147 aaKnown RBP15.7■□□□□ 0.1
TNFRSF1A-213ENST00000540022 RSBN1Q5VWQ0 802 aaPredicted RBP15.7■□□□□ 0.1
TNFRSF1A-213ENST00000540022 OR5D13Q8NGL4 314 aa15.7■□□□□ 0.1
TNFRSF1A-213ENST00000540022 CLDND2Q8NHS1 167 aa15.7■□□□□ 0.1
TNFRSF1A-213ENST00000540022 NEIL1Q96FI4 390 aaPredicted RBP15.7■□□□□ 0.1
TNFRSF1A-213ENST00000540022 SRRQ9GZT4 340 aa15.7■□□□□ 0.1
TNFRSF1A-213ENST00000540022 IGHV4-61A0A0C4DH41 118 aa15.69■□□□□ 0.1
TNFRSF1A-213ENST00000540022 CA11O75493 328 aa15.69■□□□□ 0.1
TNFRSF1A-213ENST00000540022 GNG2P59768 71 aa15.69■□□□□ 0.1
TNFRSF1A-213ENST00000540022 SEC61A1P61619 476 aaKnown RBP15.69■□□□□ 0.1
TNFRSF1A-213ENST00000540022 EDDM3AQ14507 147 aa15.69■□□□□ 0.1
TNFRSF1A-213ENST00000540022 PYDC2Q56P42 97 aa15.69■□□□□ 0.1
TNFRSF1A-213ENST00000540022 LRRC10Q5BKY1 277 aa15.69■□□□□ 0.1
TNFRSF1A-213ENST00000540022 PRSS57Q6UWY2 283 aa15.69■□□□□ 0.1
TNFRSF1A-213ENST00000540022 TPRX1Q8N7U7 411 aa15.69■□□□□ 0.1
TNFRSF1A-213ENST00000540022 OR8B3Q8NGG8 313 aa15.69■□□□□ 0.1
TNFRSF1A-213ENST00000540022 C15orf40Q8WUR7 153 aa15.69■□□□□ 0.1
TNFRSF1A-213ENST00000540022 OR8B2Q96RD0 313 aa15.69■□□□□ 0.1
TNFRSF1A-213ENST00000540022 SDHCQ99643 169 aaPredicted RBP15.69■□□□□ 0.1
TNFRSF1A-213ENST00000540022 CTDSPLO15194 276 aa15.68■□□□□ 0.1
TNFRSF1A-213ENST00000540022 IGHV2-5P01817 119 aa15.68■□□□□ 0.1
TNFRSF1A-213ENST00000540022 CD3GP09693 182 aa15.68■□□□□ 0.1
TNFRSF1A-213ENST00000540022 NDUFB7P17568 137 aa15.68■□□□□ 0.1
TNFRSF1A-213ENST00000540022 GLIPR1P48060 266 aa15.68■□□□□ 0.1
TNFRSF1A-213ENST00000540022 LMO4P61968 165 aa15.68■□□□□ 0.1
TNFRSF1A-213ENST00000540022 DGCR2P98153 550 aa15.68■□□□□ 0.1
TNFRSF1A-213ENST00000540022 ZNF497Q6ZNH5 498 aa15.68■□□□□ 0.1
TNFRSF1A-213ENST00000540022 Q6ZPA2 131 aa15.68■□□□□ 0.1
TNFRSF1A-213ENST00000540022 GDPD3Q7L5L3 318 aa15.68■□□□□ 0.1
TNFRSF1A-213ENST00000540022 NLRC3Q7RTR2 1065 aa15.68■□□□□ 0.1
TNFRSF1A-213ENST00000540022 GAPTQ8N292 157 aa15.68■□□□□ 0.1
TNFRSF1A-213ENST00000540022 OR52I2Q8NH67 350 aa15.68■□□□□ 0.1
TNFRSF1A-213ENST00000540022 GPX8Q8TED1 209 aa15.68■□□□□ 0.1
TNFRSF1A-213ENST00000540022 Q96MF0 132 aa15.68■□□□□ 0.1
TNFRSF1A-213ENST00000540022 MEIS3P1A6NDR6 274 aa15.68■□□□□ 0.1
TNFRSF1A-213ENST00000540022 NAPSAO96009 420 aa15.68■□□□□ 0.1
TNFRSF1A-213ENST00000540022 MT-ND4P03905 459 aa15.68■□□□□ 0.1
TNFRSF1A-213ENST00000540022 SLC25A16P16260 332 aa15.68■□□□□ 0.1
TNFRSF1A-213ENST00000540022 EDDM3BP56851 147 aa15.68■□□□□ 0.1
TNFRSF1A-213ENST00000540022 PAX5Q02548 391 aa15.68■□□□□ 0.1
TNFRSF1A-213ENST00000540022 ZNF846Q147U1 533 aa15.68■□□□□ 0.1
TNFRSF1A-213ENST00000540022 KRBOX4Q5JUW0 171 aa15.68■□□□□ 0.1
TNFRSF1A-213ENST00000540022 WDR25Q64LD2 544 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms