RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 LDLRAD2Q5SZI1 272 aa14.87□□□□□ -0.03
SNRPA1-203ENST00000540017 AWAT2Q6E213 333 aa14.87□□□□□ -0.03
SNRPA1-203ENST00000540017 ZNF367Q7RTV3 350 aa14.87□□□□□ -0.03
SNRPA1-203ENST00000540017 LHFPL4Q7Z7J7 247 aa14.87□□□□□ -0.03
SNRPA1-203ENST00000540017 TMEM86BQ8N661 226 aa14.87□□□□□ -0.03
SNRPA1-203ENST00000540017 NKAIN3Q8N8D7 197 aa14.87□□□□□ -0.03
SNRPA1-203ENST00000540017 SUMF2Q8NBJ7 301 aa14.87□□□□□ -0.03
SNRPA1-203ENST00000540017 TMEM104Q8NE00 496 aa14.87□□□□□ -0.03
SNRPA1-203ENST00000540017 PHYHIPQ92561 330 aa14.87□□□□□ -0.03
SNRPA1-203ENST00000540017 CYYR1Q96J86 154 aa14.87□□□□□ -0.03
SNRPA1-203ENST00000540017 BANF2Q9H503 90 aa14.87□□□□□ -0.03
SNRPA1-203ENST00000540017 IFT22Q9H7X7 185 aa14.87□□□□□ -0.03
SNRPA1-203ENST00000540017 TCF7L1Q9HCS4 588 aa14.87□□□□□ -0.03
SNRPA1-203ENST00000540017 TENM1Q9UKZ4 2725 aa14.87□□□□□ -0.03
SNRPA1-203ENST00000540017 KIAA2026Q5HYC2 2103 aa14.87□□□□□ -0.03
SNRPA1-203ENST00000540017 ANK2Q01484 3957 aa14.86□□□□□ -0.03
SNRPA1-203ENST00000540017 TRGV10A0A0A0MS01 117 aa14.86□□□□□ -0.03
SNRPA1-203ENST00000540017 FUOMA2VDF0 154 aa14.86□□□□□ -0.03
SNRPA1-203ENST00000540017 MEGF11A6BM72 1044 aa14.86□□□□□ -0.03
SNRPA1-203ENST00000540017 FAM181BA6NEQ2 426 aa14.86□□□□□ -0.03
SNRPA1-203ENST00000540017 ODF3BA8MYP8 253 aa14.86□□□□□ -0.03
SNRPA1-203ENST00000540017 ZNF780AO75290 641 aaPredicted RBP14.86□□□□□ -0.03
SNRPA1-203ENST00000540017 CLPXO76031 633 aa14.86□□□□□ -0.03
SNRPA1-203ENST00000540017 OR7C1O76099 320 aaPredicted RBP14.86□□□□□ -0.03
SNRPA1-203ENST00000540017 GTF2F2P13984 249 aa14.86□□□□□ -0.03
SNRPA1-203ENST00000540017 COMPP49747 757 aaPredicted RBP14.86□□□□□ -0.03
SNRPA1-203ENST00000540017 FABP5Q01469 135 aa14.86□□□□□ -0.03
SNRPA1-203ENST00000540017 HSD17B12Q53GQ0 312 aa14.86□□□□□ -0.03
SNRPA1-203ENST00000540017 PRAMEF5Q5TYX0 476 aa14.86□□□□□ -0.03
SNRPA1-203ENST00000540017 RSBN1Q5VWQ0 802 aaPredicted RBP14.86□□□□□ -0.03
SNRPA1-203ENST00000540017 BRICD5Q6PL45 260 aa14.86□□□□□ -0.03
SNRPA1-203ENST00000540017 DYNAPQ8N1N2 210 aa14.86□□□□□ -0.03
SNRPA1-203ENST00000540017 GFI1Q99684 422 aa14.86□□□□□ -0.03
SNRPA1-203ENST00000540017 UQCC2Q9BRT2 126 aa14.86□□□□□ -0.03
SNRPA1-203ENST00000540017 DPCDQ9BVM2 203 aaPredicted RBP14.86□□□□□ -0.03
SNRPA1-203ENST00000540017 KIF25Q9UIL4 384 aa14.86□□□□□ -0.03
SNRPA1-203ENST00000540017 SESN1Q9Y6P5 492 aa14.86□□□□□ -0.03
SNRPA1-203ENST00000540017 FAM90A8PA6NJQ4 464 aa14.85□□□□□ -0.03
SNRPA1-203ENST00000540017 PAHP00439 452 aa14.85□□□□□ -0.03
SNRPA1-203ENST00000540017 CGB3P0DN86 165 aa14.85□□□□□ -0.03
SNRPA1-203ENST00000540017 CGB7P0DN87 165 aa14.85□□□□□ -0.03
SNRPA1-203ENST00000540017 CD37P11049 281 aa14.85□□□□□ -0.03
SNRPA1-203ENST00000540017 OMGP23515 440 aa14.85□□□□□ -0.03
SNRPA1-203ENST00000540017 GPR176Q14439 515 aa14.85□□□□□ -0.03
SNRPA1-203ENST00000540017 C17orf58Q2M2W7 97 aa14.85□□□□□ -0.03
SNRPA1-203ENST00000540017 C1orf100Q5SVJ3 147 aa14.85□□□□□ -0.03
SNRPA1-203ENST00000540017 UTF1Q5T230 341 aa14.85□□□□□ -0.03
SNRPA1-203ENST00000540017 SPARTQ8N0X7 666 aa14.85□□□□□ -0.03
SNRPA1-203ENST00000540017 BEND2Q8NDZ0 799 aa14.85□□□□□ -0.03
SNRPA1-203ENST00000540017 OR11H6Q8NGC7 330 aa14.85□□□□□ -0.03
SNRPA1-203ENST00000540017 OR13A1Q8NGR1 328 aa14.85□□□□□ -0.03
SNRPA1-203ENST00000540017 OR13D1Q8NGV5 346 aa14.85□□□□□ -0.03
SNRPA1-203ENST00000540017 TAS2R3Q9NYW6 316 aa14.85□□□□□ -0.03
SNRPA1-203ENST00000540017 TRAV39A0A0B4J263 110 aa14.84□□□□□ -0.03
SNRPA1-203ENST00000540017 ARG1P05089 322 aa14.84□□□□□ -0.03
SNRPA1-203ENST00000540017 MGMTP16455 207 aa14.84□□□□□ -0.03
SNRPA1-203ENST00000540017 CDK2P24941 298 aa14.84□□□□□ -0.03
SNRPA1-203ENST00000540017 TRAM1Q15629 374 aa14.84□□□□□ -0.03
SNRPA1-203ENST00000540017 MPV17LQ2QL34 196 aa14.84□□□□□ -0.03
SNRPA1-203ENST00000540017 AWAT1Q58HT5 328 aa14.84□□□□□ -0.03
SNRPA1-203ENST00000540017 ZNF626Q68DY1 528 aa14.84□□□□□ -0.03
SNRPA1-203ENST00000540017 HEPN1Q6WQI6 88 aa14.84□□□□□ -0.03
SNRPA1-203ENST00000540017 C12orf54Q6X4T0 127 aa14.84□□□□□ -0.03
SNRPA1-203ENST00000540017 LINC00596Q86U02 117 aa14.84□□□□□ -0.03
SNRPA1-203ENST00000540017 YTHDF1Q9BYJ9 559 aaKnown RBP14.84□□□□□ -0.03
SNRPA1-203ENST00000540017 MEGF9Q9H1U4 602 aa14.84□□□□□ -0.03
SNRPA1-203ENST00000540017 TMEM133Q9H2Q1 129 aa14.84□□□□□ -0.03
SNRPA1-203ENST00000540017 DPAGT1Q9H3H5 408 aa14.84□□□□□ -0.03
SNRPA1-203ENST00000540017 GAL3ST2Q9H3Q3 398 aa14.84□□□□□ -0.03
SNRPA1-203ENST00000540017 PCDHB16Q9NRJ7 776 aa14.84□□□□□ -0.03
SNRPA1-203ENST00000540017 MEIKINA0A087WXM9 373 aa14.83□□□□□ -0.04
SNRPA1-203ENST00000540017 IGHV2-26A0A0B4J1V2 119 aa14.83□□□□□ -0.04
SNRPA1-203ENST00000540017 FAM172BPA6NC97 362 aa14.83□□□□□ -0.04
SNRPA1-203ENST00000540017 GPR137BO60478 399 aa14.83□□□□□ -0.04
SNRPA1-203ENST00000540017 MRPS14O60783 128 aaKnown RBP14.83□□□□□ -0.04
SNRPA1-203ENST00000540017 CRTAPO75718 401 aaPredicted RBP14.83□□□□□ -0.04
SNRPA1-203ENST00000540017 PSMA1P25786 263 aaKnown RBP14.83□□□□□ -0.04
SNRPA1-203ENST00000540017 GABRA5P31644 462 aa14.83□□□□□ -0.04
SNRPA1-203ENST00000540017 LGALS4P56470 323 aa14.83□□□□□ -0.04
SNRPA1-203ENST00000540017 RELBQ01201 579 aa14.83□□□□□ -0.04
SNRPA1-203ENST00000540017 PAX5Q02548 391 aa14.83□□□□□ -0.04
SNRPA1-203ENST00000540017 ATAD3CQ5T2N8 411 aa14.83□□□□□ -0.04
SNRPA1-203ENST00000540017 UBE2UQ5VVX9 321 aa14.83□□□□□ -0.04
SNRPA1-203ENST00000540017 GLT8D1Q68CQ7 371 aa14.83□□□□□ -0.04
SNRPA1-203ENST00000540017 OR10K2Q6IF99 312 aa14.83□□□□□ -0.04
SNRPA1-203ENST00000540017 FAM46BQ96A09 425 aa14.83□□□□□ -0.04
SNRPA1-203ENST00000540017 MRPS24Q96EL2 167 aaKnown RBP14.83□□□□□ -0.04
SNRPA1-203ENST00000540017 Q96M66 194 aa14.83□□□□□ -0.04
SNRPA1-203ENST00000540017 BARHL1Q9BZE3 327 aa14.83□□□□□ -0.04
SNRPA1-203ENST00000540017 SELENOIQ9C0D9 397 aa14.83□□□□□ -0.04
SNRPA1-203ENST00000540017 KCNK15Q9H427 330 aa14.83□□□□□ -0.04
SNRPA1-203ENST00000540017 NCOR1P1Q9H4R4 102 aa14.83□□□□□ -0.04
SNRPA1-203ENST00000540017 OR6C3Q9NZP0 311 aa14.83□□□□□ -0.04
SNRPA1-203ENST00000540017 ZNF729A6NN14 1252 aaPredicted RBP14.82□□□□□ -0.04
SNRPA1-203ENST00000540017 VSIG8P0DPA2 414 aa14.82□□□□□ -0.04
SNRPA1-203ENST00000540017 GLP1RP43220 463 aa14.82□□□□□ -0.04
SNRPA1-203ENST00000540017 KCNJ3P48549 501 aa14.82□□□□□ -0.04
SNRPA1-203ENST00000540017 DYNC1I2Q13409 638 aaKnown RBP14.82□□□□□ -0.04
SNRPA1-203ENST00000540017 SIGIRRQ6IA17 410 aa14.82□□□□□ -0.04
SNRPA1-203ENST00000540017 SVOPQ8N4V2 548 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms