RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 ZNF19P17023 458 aa10.99□□□□□ -0.65
DDX55-206ENST00000539934 RPS4Y1P22090 263 aaKnown RBP10.99□□□□□ -0.65
DDX55-206ENST00000539934 PMS2P11Q13670 270 aa10.99□□□□□ -0.65
DDX55-206ENST00000539934 DOC2BQ14184 412 aa10.99□□□□□ -0.65
DDX55-206ENST00000539934 NR0B2Q15466 257 aa10.99□□□□□ -0.65
DDX55-206ENST00000539934 MST1LQ2TV78 715 aa10.99□□□□□ -0.65
DDX55-206ENST00000539934 MRPL2Q5T653 305 aaKnown RBP10.99□□□□□ -0.65
DDX55-206ENST00000539934 PRAMEF17Q5VTA0 474 aa10.99□□□□□ -0.65
DDX55-206ENST00000539934 SLC16A9Q7RTY1 509 aa10.99□□□□□ -0.65
DDX55-206ENST00000539934 LAPTM4BQ86VI4 370 aa10.99□□□□□ -0.65
DDX55-206ENST00000539934 SMIM20Q8N5G0 67 aa10.99□□□□□ -0.65
DDX55-206ENST00000539934 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.99□□□□□ -0.65
DDX55-206ENST00000539934 HOXB13Q92826 284 aaPredicted RBP10.99□□□□□ -0.65
DDX55-206ENST00000539934 TMEM18Q96B42 140 aa10.99□□□□□ -0.65
DDX55-206ENST00000539934 ATF6BQ99941 703 aa10.99□□□□□ -0.65
DDX55-206ENST00000539934 AMBNQ9NP70 447 aa10.99□□□□□ -0.65
DDX55-206ENST00000539934 RAB18Q9NP72 206 aa10.99□□□□□ -0.65
DDX55-206ENST00000539934 NTNG1Q9Y2I2 539 aa10.99□□□□□ -0.65
DDX55-206ENST00000539934 SEC16AO15027 2179 aa10.98□□□□□ -0.65
DDX55-206ENST00000539934 CELSR2Q9HCU4 2923 aa10.98□□□□□ -0.65
DDX55-206ENST00000539934 DLSTP36957 453 aa10.98□□□□□ -0.65
DDX55-206ENST00000539934 GNMTQ14749 295 aa10.98□□□□□ -0.65
DDX55-206ENST00000539934 TOMM5Q8N4H5 51 aa10.98□□□□□ -0.65
DDX55-206ENST00000539934 OR4N2Q8NGD1 307 aa10.98□□□□□ -0.65
DDX55-206ENST00000539934 OR1P1Q8NH06 330 aa10.98□□□□□ -0.65
DDX55-206ENST00000539934 OR5W2Q8NH69 310 aa10.98□□□□□ -0.65
DDX55-206ENST00000539934 TNFAIP8L1Q8WVP5 186 aa10.98□□□□□ -0.65
DDX55-206ENST00000539934 VSTM2LQ96N03 204 aa10.98□□□□□ -0.65
DDX55-206ENST00000539934 TAS2R5Q9NYW4 299 aa10.98□□□□□ -0.65
DDX55-206ENST00000539934 NAT8Q9UHE5 227 aa10.98□□□□□ -0.65
DDX55-206ENST00000539934 FARSAQ9Y285 508 aaKnown RBP10.98□□□□□ -0.65
DDX55-206ENST00000539934 LSM2Q9Y333 95 aaKnown RBP10.98□□□□□ -0.65
DDX55-206ENST00000539934 UFC1Q9Y3C8 167 aa10.98□□□□□ -0.65
DDX55-206ENST00000539934 OR51B2Q9Y5P1 312 aa10.98□□□□□ -0.65
DDX55-206ENST00000539934 NUP210LQ5VU65 1888 aa10.98□□□□□ -0.65
DDX55-206ENST00000539934 COL27A1Q8IZC6 1860 aaPredicted RBP10.98□□□□□ -0.65
DDX55-206ENST00000539934 LOC102724200A0A096LPH7 203 aaPredicted RBP10.97□□□□□ -0.65
DDX55-206ENST00000539934 G3V3Y1 287 aa10.97□□□□□ -0.65
DDX55-206ENST00000539934 SMIM17P0DL12 118 aa10.97□□□□□ -0.65
DDX55-206ENST00000539934 PIPP12273 146 aaPredicted RBP10.97□□□□□ -0.65
DDX55-206ENST00000539934 FBLP22087 321 aaKnown RBP10.97□□□□□ -0.65
DDX55-206ENST00000539934 NNATQ16517 81 aa10.97□□□□□ -0.65
DDX55-206ENST00000539934 WDR25Q64LD2 544 aaPredicted RBP10.97□□□□□ -0.65
DDX55-206ENST00000539934 TMEM42Q69YG0 159 aa10.97□□□□□ -0.65
DDX55-206ENST00000539934 ZAR1Q86SH2 424 aa10.97□□□□□ -0.65
DDX55-206ENST00000539934 ABHD5Q8WTS1 349 aa10.97□□□□□ -0.65
DDX55-206ENST00000539934 TBX5Q99593 518 aa10.97□□□□□ -0.65
DDX55-206ENST00000539934 HHLA2Q9UM44 414 aa10.97□□□□□ -0.65
DDX55-206ENST00000539934 A0A087WWC5 75 aa10.97□□□□□ -0.65
DDX55-206ENST00000539934 GAGE12BA1L429 117 aa10.97□□□□□ -0.65
DDX55-206ENST00000539934 OR6C6A6NF89 314 aa10.97□□□□□ -0.65
DDX55-206ENST00000539934 GABRPO00591 440 aa10.97□□□□□ -0.65
DDX55-206ENST00000539934 OR5H8P0DN80 308 aa10.97□□□□□ -0.65
DDX55-206ENST00000539934 TFPIP10646 304 aa10.97□□□□□ -0.65
DDX55-206ENST00000539934 WT1P19544 449 aaPredicted RBP10.97□□□□□ -0.65
DDX55-206ENST00000539934 SRD5A2P31213 254 aa10.97□□□□□ -0.65
DDX55-206ENST00000539934 ASCL1P50553 236 aa10.97□□□□□ -0.65
DDX55-206ENST00000539934 ZNF136P52737 540 aa10.97□□□□□ -0.65
DDX55-206ENST00000539934 H3F3AP84243 136 aa10.97□□□□□ -0.65
DDX55-206ENST00000539934 FUT7Q11130 342 aa10.97□□□□□ -0.65
DDX55-206ENST00000539934 MLLT11Q13015 90 aaPredicted RBP10.97□□□□□ -0.65
DDX55-206ENST00000539934 ZNF585BQ52M93 769 aa10.97□□□□□ -0.65
DDX55-206ENST00000539934 C1orf189Q5VU69 101 aa10.97□□□□□ -0.65
DDX55-206ENST00000539934 MEX3DQ86XN8 651 aaKnown RBP10.97□□□□□ -0.65
DDX55-206ENST00000539934 C16orf52Q8NHV5 167 aa10.97□□□□□ -0.65
DDX55-206ENST00000539934 FRZBQ92765 325 aa10.97□□□□□ -0.65
DDX55-206ENST00000539934 RAB39BQ96DA2 213 aa10.97□□□□□ -0.65
DDX55-206ENST00000539934 RNF125Q96EQ8 232 aa10.97□□□□□ -0.65
DDX55-206ENST00000539934 ZNF471Q9BX82 626 aaPredicted RBP10.97□□□□□ -0.65
DDX55-206ENST00000539934 WDR13Q9H1Z4 485 aa10.97□□□□□ -0.65
DDX55-206ENST00000539934 CLN6Q9NWW5 311 aa10.97□□□□□ -0.65
DDX55-206ENST00000539934 FKBP11Q9NYL4 201 aa10.97□□□□□ -0.65
DDX55-206ENST00000539934 SLC7A7Q9UM01 511 aa10.97□□□□□ -0.65
DDX55-206ENST00000539934 RNF115Q9Y4L5 304 aa10.97□□□□□ -0.65
DDX55-206ENST00000539934 CACNA1DQ01668 2161 aa10.97□□□□□ -0.65
DDX55-206ENST00000539934 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.96□□□□□ -0.65
DDX55-206ENST00000539934 A0A1B0GU03 582 aa10.96□□□□□ -0.65
DDX55-206ENST00000539934 WIPF3A6NGB9 483 aa10.96□□□□□ -0.65
DDX55-206ENST00000539934 TRGC2P03986 189 aa10.96□□□□□ -0.65
DDX55-206ENST00000539934 CTSDP07339 412 aaPredicted RBP10.96□□□□□ -0.65
DDX55-206ENST00000539934 NME2P22392 152 aa10.96□□□□□ -0.65
DDX55-206ENST00000539934 GPR6P46095 362 aaPredicted RBP10.96□□□□□ -0.65
DDX55-206ENST00000539934 PIGPP57054 158 aa10.96□□□□□ -0.65
DDX55-206ENST00000539934 PLP1P60201 277 aa10.96□□□□□ -0.65
DDX55-206ENST00000539934 VAMP3Q15836 100 aa10.96□□□□□ -0.65
DDX55-206ENST00000539934 LTC4SQ16873 150 aa10.96□□□□□ -0.65
DDX55-206ENST00000539934 TMEM183BQ1AE95 376 aa10.96□□□□□ -0.65
DDX55-206ENST00000539934 ACSM3Q53FZ2 586 aa10.96□□□□□ -0.65
DDX55-206ENST00000539934 C9orf40Q8IXQ3 194 aa10.96□□□□□ -0.65
DDX55-206ENST00000539934 PLPP5Q8NEB5 264 aa10.96□□□□□ -0.65
DDX55-206ENST00000539934 TMEM106AQ96A25 262 aa10.96□□□□□ -0.65
DDX55-206ENST00000539934 ZNF501Q96CX3 271 aaPredicted RBP10.96□□□□□ -0.65
DDX55-206ENST00000539934 FAM46AQ96IP4 442 aaKnown RBP10.96□□□□□ -0.65
DDX55-206ENST00000539934 ZNF75AQ96N20 296 aa10.96□□□□□ -0.65
DDX55-206ENST00000539934 DUX5Q96PT3 197 aa10.96□□□□□ -0.65
DDX55-206ENST00000539934 GPA33Q99795 319 aa10.96□□□□□ -0.65
DDX55-206ENST00000539934 C1orf198Q9H425 327 aa10.96□□□□□ -0.65
DDX55-206ENST00000539934 TRIM36Q9NQ86 728 aa10.96□□□□□ -0.65
DDX55-206ENST00000539934 CHD3Q12873 2000 aaKnown RBP10.96□□□□□ -0.65
DDX55-206ENST00000539934 FER1L5A0AVI2 2057 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms