RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 KCNAB3O43448 404 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 HCRTR2O43614 444 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 KLF7O75840 302 aaPredicted RBP6.63□□□□□ -1.35
CCDC60-204ENST00000539847 MPIG6BO95866 241 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 SFTPBP07988 381 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 DUSP1P28562 367 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 APOBEC1P41238 236 aaKnown RBP6.63□□□□□ -1.35
CCDC60-204ENST00000539847 CSNK1A1P48729 337 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 CCR4P51679 360 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 RND2P52198 227 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 ZNF133P52736 654 aaPredicted RBP6.63□□□□□ -1.35
CCDC60-204ENST00000539847 S100A10P60903 97 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 PPP1CAP62136 330 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 CSNK2A1P68400 391 aaPredicted RBP6.63□□□□□ -1.35
CCDC60-204ENST00000539847 FOXO1Q12778 655 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 PNRC1Q12796 327 aaPredicted RBP6.63□□□□□ -1.35
CCDC60-204ENST00000539847 ARFRP1Q13795 201 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 ZNF266Q14584 549 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 UBE2V2Q15819 145 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 MS4A18Q3C1V0 323 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 CHRFAM7AQ494W8 412 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 SLC22A6Q4U2R8 563 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 KHDC3LQ587J8 217 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 ZNF506Q5JVG8 444 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 DCAF10Q5QP82 559 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 GGNBP1Q5YKI7 109 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 OR2A2Q6IF42 318 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 COX15Q7KZN9 410 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 MARCH3Q86UD3 253 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 ZADH2Q8N4Q0 377 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 APCDD1LQ8NCL9 501 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 CSNK2A3Q8NEV1 391 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 OR10H5Q8NGA6 315 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 PTPMT1Q8WUK0 201 aaPredicted RBP6.63□□□□□ -1.35
CCDC60-204ENST00000539847 MAFIPQ8WZ33 124 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 ROBO4Q8WZ75 1007 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 SLAMF6Q96DU3 332 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 RBMXL1Q96E39 390 aaKnown RBP6.63□□□□□ -1.35
CCDC60-204ENST00000539847 GNPNAT1Q96EK6 184 aaPredicted RBP6.63□□□□□ -1.35
CCDC60-204ENST00000539847 TVP23CQ96ET8 276 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 MARS2Q96GW9 593 aaKnown RBP6.63□□□□□ -1.35
CCDC60-204ENST00000539847 C14orf144Q96I85 54 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 CTDSP1Q9GZU7 261 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 NXF5Q9H1B4 397 aaKnown RBP6.63□□□□□ -1.35
CCDC60-204ENST00000539847 PRDM13Q9H4Q3 707 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 PTGES2Q9H7Z7 377 aa6.63□□□□□ -1.35
CCDC60-204ENST00000539847 SPTBP11277 2137 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 TRBV24-1A0A075B6N3 115 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 IGKV3D-11A0A0A0MRZ8 115 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 A0A0A6YYC8 382 aaPredicted RBP6.62□□□□□ -1.35
CCDC60-204ENST00000539847 LOC102725191A0A1B0GVB3 256 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 A0A1W2PNV4 684 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 hCG_1809904A0A1W2PP81 198 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 DUXBA0A1W2PPF3 345 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 A0A1W2PR64 198 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 A0A1W2PRV1 198 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 IFITM10A6NMD0 228 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 C17orf105B2RV13 164 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 ZNF732B4DXR9 585 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 ZNF587BE7ETH6 402 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 NPIPA5E9PKD4 350 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 C11orf98E9PRG8 122 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 I3L1I5 382 aaPredicted RBP6.62□□□□□ -1.35
CCDC60-204ENST00000539847 HSD17B6O14756 317 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 AGPAT2O15120 278 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 ST8SIA3O43173 380 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 RAD51DO75771 328 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 CDS2O95674 445 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 IGLV1-40P01703 118 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 IGLV3-1P01715 115 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 SRP19P09132 144 aaKnown RBP6.62□□□□□ -1.35
CCDC60-204ENST00000539847 PVRP15151 417 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 TNFSF4P23510 183 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 FKBP2P26885 142 aaKnown RBP6.62□□□□□ -1.35
CCDC60-204ENST00000539847 PTGER4P35408 488 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 RPS10P46783 165 aaKnown RBP6.62□□□□□ -1.35
CCDC60-204ENST00000539847 LGALS4P56470 323 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 OR2B8PP59922 312 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 SPCS3P61009 180 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 GRB2P62993 217 aaKnown RBP6.62□□□□□ -1.35
CCDC60-204ENST00000539847 TMEM187Q14656 261 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 RSU1Q15404 277 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 ZNF124Q15973 351 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 KRTAP21-3Q3LHN1 58 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 COA6Q5JTJ3 125 aaKnown RBP6.62□□□□□ -1.35
CCDC60-204ENST00000539847 IGFL2Q6UWQ7 119 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 ETV3LQ6ZN32 361 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 SSX9Q7RTT3 188 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.62□□□□□ -1.35
CCDC60-204ENST00000539847 FAM219AQ8IW50 185 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 TMEM151BQ8IW70 566 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 FAM185AQ8N0U4 392 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 LGI3Q8N145 548 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 HIST3H2BBQ8N257 126 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 ZNF383Q8NA42 475 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 BHLHE23Q8NDY6 225 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 OR2Y1Q8NGV0 311 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 PP6455Q8WZ26 134 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 C11orf40Q8WZ69 217 aa6.62□□□□□ -1.35
CCDC60-204ENST00000539847 SLAMF9Q96A28 289 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms