RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 OR51D1Q8NGF3 324 aa12.24□□□□□ -0.45
UBE3B-211ENST00000539843 OR10AC1Q8NH08 325 aa12.24□□□□□ -0.45
UBE3B-211ENST00000539843 DPF1Q92782 380 aa12.24□□□□□ -0.45
UBE3B-211ENST00000539843 LGALS12Q96DT0 336 aa12.24□□□□□ -0.45
UBE3B-211ENST00000539843 RCC1LQ96I51 464 aaKnown RBP12.24□□□□□ -0.45
UBE3B-211ENST00000539843 NR1H4Q96RI1 486 aaPredicted RBP12.24□□□□□ -0.45
UBE3B-211ENST00000539843 C9orf16Q9BUW7 83 aa12.24□□□□□ -0.45
UBE3B-211ENST00000539843 FAM192AQ9GZU8 254 aa12.24□□□□□ -0.45
UBE3B-211ENST00000539843 ZNF286AQ9HBT8 521 aa12.24□□□□□ -0.45
UBE3B-211ENST00000539843 MOB4Q9Y3A3 225 aa12.24□□□□□ -0.45
UBE3B-211ENST00000539843 RPL36Q9Y3U8 105 aaKnown RBP12.24□□□□□ -0.45
UBE3B-211ENST00000539843 HSPE1-MOB4S4R3N1 261 aa12.24□□□□□ -0.45
UBE3B-211ENST00000539843 A0A087X0M5 115 aa12.23□□□□□ -0.45
UBE3B-211ENST00000539843 KBTBD11-OT1A0A1B0GTJ5 212 aa12.23□□□□□ -0.45
UBE3B-211ENST00000539843 A0A1B0GX30 115 aa12.23□□□□□ -0.45
UBE3B-211ENST00000539843 HSPB6O14558 160 aa12.23□□□□□ -0.45
UBE3B-211ENST00000539843 PPP3R1P63098 170 aa12.23□□□□□ -0.45
UBE3B-211ENST00000539843 HES1Q14469 280 aa12.23□□□□□ -0.45
UBE3B-211ENST00000539843 IL13RA2Q14627 380 aa12.23□□□□□ -0.45
UBE3B-211ENST00000539843 KLHL22Q53GT1 634 aa12.23□□□□□ -0.45
UBE3B-211ENST00000539843 Q6ZS46 218 aa12.23□□□□□ -0.45
UBE3B-211ENST00000539843 SATL1Q86VE3 508 aa12.23□□□□□ -0.45
UBE3B-211ENST00000539843 CBR4Q8N4T8 237 aa12.23□□□□□ -0.45
UBE3B-211ENST00000539843 PARP16Q8N5Y8 322 aa12.23□□□□□ -0.45
UBE3B-211ENST00000539843 PXT1Q8NFP0 134 aa12.23□□□□□ -0.45
UBE3B-211ENST00000539843 TNFAIP8L1Q8WVP5 186 aa12.23□□□□□ -0.45
UBE3B-211ENST00000539843 NCOR1P1Q9H4R4 102 aa12.23□□□□□ -0.45
UBE3B-211ENST00000539843 FAM53CQ9NYF3 392 aa12.23□□□□□ -0.45
UBE3B-211ENST00000539843 PLXNB1O43157 2135 aa12.23□□□□□ -0.45
UBE3B-211ENST00000539843 PRKDCP78527 4128 aaKnown RBP12.22□□□□□ -0.45
UBE3B-211ENST00000539843 ADARB2-AS1A8MUL3 147 aa12.22□□□□□ -0.45
UBE3B-211ENST00000539843 ZFPL1O95159 310 aa12.22□□□□□ -0.45
UBE3B-211ENST00000539843 CSTBP04080 98 aaKnown RBP12.22□□□□□ -0.45
UBE3B-211ENST00000539843 RAB7AP51149 207 aa12.22□□□□□ -0.45
UBE3B-211ENST00000539843 MADCAM1Q13477 382 aa12.22□□□□□ -0.45
UBE3B-211ENST00000539843 LPCAT4Q643R3 524 aa12.22□□□□□ -0.45
UBE3B-211ENST00000539843 ELP2Q6IA86 826 aa12.22□□□□□ -0.45
UBE3B-211ENST00000539843 Q6P435 159 aa12.22□□□□□ -0.45
UBE3B-211ENST00000539843 WFDC9Q8NEX5 89 aa12.22□□□□□ -0.45
UBE3B-211ENST00000539843 OR51T1Q8NGJ9 327 aa12.22□□□□□ -0.45
UBE3B-211ENST00000539843 MYDGFQ969H8 173 aa12.22□□□□□ -0.45
UBE3B-211ENST00000539843 RNF166Q96A37 237 aaPredicted RBP12.22□□□□□ -0.45
UBE3B-211ENST00000539843 COQ2Q96H96 371 aa12.22□□□□□ -0.45
UBE3B-211ENST00000539843 FAM118AQ9NWS6 357 aa12.22□□□□□ -0.45
UBE3B-211ENST00000539843 PAK1IP1Q9NWT1 392 aaPredicted RBP12.22□□□□□ -0.45
UBE3B-211ENST00000539843 AURKAIP1Q9NWT8 199 aaPredicted RBP12.22□□□□□ -0.45
UBE3B-211ENST00000539843 CALYQ9NYX4 217 aa12.22□□□□□ -0.45
UBE3B-211ENST00000539843 IDI2-AS1Q9NZ38 188 aa12.22□□□□□ -0.45
UBE3B-211ENST00000539843 PSMB11A5LHX3 300 aa12.21□□□□□ -0.45
UBE3B-211ENST00000539843 IL1AP01583 271 aa12.21□□□□□ -0.45
UBE3B-211ENST00000539843 IGLL1P15814 213 aa12.21□□□□□ -0.45
UBE3B-211ENST00000539843 ZP1P60852 638 aa12.21□□□□□ -0.45
UBE3B-211ENST00000539843 SLC35B1P78383 322 aa12.21□□□□□ -0.45
UBE3B-211ENST00000539843 ZSCAN26Q16670 478 aa12.21□□□□□ -0.45
UBE3B-211ENST00000539843 FOXB2Q5VYV0 432 aa12.21□□□□□ -0.45
UBE3B-211ENST00000539843 BAIAP2L2Q6UXY1 529 aa12.21□□□□□ -0.45
UBE3B-211ENST00000539843 THNSL2Q86YJ6 484 aa12.21□□□□□ -0.45
UBE3B-211ENST00000539843 OSR2Q8N2R0 312 aa12.21□□□□□ -0.45
UBE3B-211ENST00000539843 OR10A7Q8NGE5 316 aa12.21□□□□□ -0.45
UBE3B-211ENST00000539843 OR10X1Q8NGY0 326 aa12.21□□□□□ -0.45
UBE3B-211ENST00000539843 CNIH3Q8TBE1 160 aa12.21□□□□□ -0.45
UBE3B-211ENST00000539843 KIRREL1Q96J84 757 aa12.21□□□□□ -0.45
UBE3B-211ENST00000539843 PPIL3Q9H2H8 161 aaKnown RBP12.21□□□□□ -0.45
UBE3B-211ENST00000539843 ERVK13-1Q9NX77 482 aa12.21□□□□□ -0.45
UBE3B-211ENST00000539843 KIF25Q9UIL4 384 aa12.21□□□□□ -0.45
UBE3B-211ENST00000539843 ZNF281Q9Y2X9 895 aa12.21□□□□□ -0.45
UBE3B-211ENST00000539843 DSCAML1Q8TD84 2053 aa12.2□□□□□ -0.46
UBE3B-211ENST00000539843 IRGMA1A4Y4 181 aa12.2□□□□□ -0.46
UBE3B-211ENST00000539843 J3QR06 171 aa12.2□□□□□ -0.46
UBE3B-211ENST00000539843 TMEM11P17152 192 aa12.2□□□□□ -0.46
UBE3B-211ENST00000539843 MED21Q13503 144 aa12.2□□□□□ -0.46
UBE3B-211ENST00000539843 C17orf58Q2M2W7 97 aa12.2□□□□□ -0.46
UBE3B-211ENST00000539843 TMPRSS11AQ6ZMR5 421 aa12.2□□□□□ -0.46
UBE3B-211ENST00000539843 SLC16A12Q6ZSM3 486 aa12.2□□□□□ -0.46
UBE3B-211ENST00000539843 OR8H3Q8N146 312 aa12.2□□□□□ -0.46
UBE3B-211ENST00000539843 ZNF555Q8NEP9 628 aa12.2□□□□□ -0.46
UBE3B-211ENST00000539843 GPR148Q8TDV2 347 aa12.2□□□□□ -0.46
UBE3B-211ENST00000539843 CHPT1Q8WUD6 406 aa12.2□□□□□ -0.46
UBE3B-211ENST00000539843 PDCD1LG2Q9BQ51 273 aa12.2□□□□□ -0.46
UBE3B-211ENST00000539843 JAM3Q9BX67 310 aa12.2□□□□□ -0.46
UBE3B-211ENST00000539843 METTL9Q9H1A3 318 aa12.2□□□□□ -0.46
UBE3B-211ENST00000539843 ISG20L2Q9H9L3 353 aaKnown RBP12.2□□□□□ -0.46
UBE3B-211ENST00000539843 RAB9BQ9NP90 201 aa12.2□□□□□ -0.46
UBE3B-211ENST00000539843 ZMAT5Q9UDW3 170 aaKnown RBP12.2□□□□□ -0.46
UBE3B-211ENST00000539843 NOTCH3Q9UM47 2321 aa12.2□□□□□ -0.46
UBE3B-211ENST00000539843 E9PQ18 207 aa12.19□□□□□ -0.46
UBE3B-211ENST00000539843 ZNF780AO75290 641 aaPredicted RBP12.19□□□□□ -0.46
UBE3B-211ENST00000539843 HTR3BO95264 441 aa12.19□□□□□ -0.46
UBE3B-211ENST00000539843 MPIG6BO95866 241 aa12.19□□□□□ -0.46
UBE3B-211ENST00000539843 SNRNP70P08621 437 aaKnown RBP12.19□□□□□ -0.46
UBE3B-211ENST00000539843 IL3RAP26951 378 aa12.19□□□□□ -0.46
UBE3B-211ENST00000539843 SLC6A1P30531 599 aa12.19□□□□□ -0.46
UBE3B-211ENST00000539843 GDNFP39905 211 aa12.19□□□□□ -0.46
UBE3B-211ENST00000539843 SOX2P48431 317 aa12.19□□□□□ -0.46
UBE3B-211ENST00000539843 DCTN2Q13561 401 aaKnown RBP12.19□□□□□ -0.46
UBE3B-211ENST00000539843 CDK5R1Q15078 307 aa12.19□□□□□ -0.46
UBE3B-211ENST00000539843 LTC4SQ16873 150 aa12.19□□□□□ -0.46
UBE3B-211ENST00000539843 CCDC58Q4VC31 144 aa12.19□□□□□ -0.46
UBE3B-211ENST00000539843 RPL22L1Q6P5R6 122 aaKnown RBP12.19□□□□□ -0.46
UBE3B-211ENST00000539843 LINC00596Q86U02 117 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms