RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 SPANXN2Q5MJ10 180 aa12.89□□□□□ -0.35
DDB1-216ENST00000539739 ATPAF1Q5TC12 328 aaPredicted RBP12.89□□□□□ -0.35
DDB1-216ENST00000539739 LINC00596Q86U02 117 aa12.89□□□□□ -0.35
DDB1-216ENST00000539739 GDPD1Q8N9F7 314 aa12.89□□□□□ -0.35
DDB1-216ENST00000539739 SVIPQ8NHG7 77 aa12.89□□□□□ -0.35
DDB1-216ENST00000539739 KCTD12Q96CX2 325 aaKnown RBP12.89□□□□□ -0.35
DDB1-216ENST00000539739 DMRTB1Q96MA1 342 aa12.89□□□□□ -0.35
DDB1-216ENST00000539739 TMEM59Q9BXS4 323 aa12.89□□□□□ -0.35
DDB1-216ENST00000539739 SELENOIQ9C0D9 397 aa12.89□□□□□ -0.35
DDB1-216ENST00000539739 ZNF665Q9H7R5 613 aa12.89□□□□□ -0.35
DDB1-216ENST00000539739 COA4Q9NYJ1 87 aa12.89□□□□□ -0.35
DDB1-216ENST00000539739 ABRACLQ9P1F3 81 aa12.89□□□□□ -0.35
DDB1-216ENST00000539739 IL36RNQ9UBH0 155 aa12.89□□□□□ -0.35
DDB1-216ENST00000539739 EXTL2Q9UBQ6 330 aa12.89□□□□□ -0.35
DDB1-216ENST00000539739 FBLN5Q9UBX5 448 aa12.89□□□□□ -0.35
DDB1-216ENST00000539739 RAB22AQ9UL26 194 aa12.89□□□□□ -0.35
DDB1-216ENST00000539739 A0A0A6YYJ9 748 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 CEACAM18A8MTB9 384 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 TMPRSS2O15393 492 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 ADAM20O43506 726 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 HAND1O96004 215 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 USF1P22415 310 aaPredicted RBP12.88□□□□□ -0.35
DDB1-216ENST00000539739 CPT2P23786 658 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 DUSP1P28562 367 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 RBM11P57052 281 aaKnown RBP12.88□□□□□ -0.35
DDB1-216ENST00000539739 FAM189A2Q15884 450 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 PIGYQ3MUY2 71 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 OR10K2Q6IF99 312 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 NLRC3Q7RTR2 1065 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 OVCH2Q7RTZ1 564 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 CLRN3Q8NCR9 226 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 TMEM104Q8NE00 496 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 WFDC11Q8NEX6 87 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 AP3S1Q92572 193 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 RAB39BQ96DA2 213 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 POM121Q96HA1 1249 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 URM1Q9BTM9 101 aaKnown RBP12.88□□□□□ -0.35
DDB1-216ENST00000539739 KCNK15Q9H427 330 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 SEBOXQ9HB31 216 aaPredicted RBP12.88□□□□□ -0.35
DDB1-216ENST00000539739 OR5V1Q9UGF6 321 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 IGKV1D-17A0A075B6S4 117 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 TMEM272A0A1B0GTI8 110 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 DBX1A6NMT0 343 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 CLN5O75503 358 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 SCO1O75880 301 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 CHRM2P08172 466 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 SNRPBP14678 240 aaKnown RBP12.88□□□□□ -0.35
DDB1-216ENST00000539739 ZNF44P15621 663 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 RPS2P15880 293 aaKnown RBP12.88□□□□□ -0.35
DDB1-216ENST00000539739 QRFPP83859 136 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 UNC119Q13432 240 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 ZNF788Q6ZQV5 615 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 COMMD7Q86VX2 200 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 CLDND2Q8NHS1 167 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 ACOT12Q8WYK0 555 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 PTX4Q96A99 478 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 CCL13Q99616 98 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 REG4Q9BYZ8 158 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 BARHL1Q9BZE3 327 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 PATZ1Q9HBE1 687 aaKnown RBP12.88□□□□□ -0.35
DDB1-216ENST00000539739 KAAG1Q9UBP8 84 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 ZNF222Q9UK12 451 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 ETV7Q9Y603 341 aa12.88□□□□□ -0.35
DDB1-216ENST00000539739 IGHV4-61A0A0C4DH41 118 aa12.87□□□□□ -0.35
DDB1-216ENST00000539739 TNFRSF13BO14836 293 aaPredicted RBP12.87□□□□□ -0.35
DDB1-216ENST00000539739 DEGS1O15121 323 aa12.87□□□□□ -0.35
DDB1-216ENST00000539739 LDLRAD4O15165 306 aa12.87□□□□□ -0.35
DDB1-216ENST00000539739 OR7C1O76099 320 aaPredicted RBP12.87□□□□□ -0.35
DDB1-216ENST00000539739 SMIM6P0DI80 62 aa12.87□□□□□ -0.35
DDB1-216ENST00000539739 RAB6AP20340 208 aa12.87□□□□□ -0.35
DDB1-216ENST00000539739 RPS27AP62979 156 aaKnown RBP12.87□□□□□ -0.35
DDB1-216ENST00000539739 IL13RA1P78552 427 aa12.87□□□□□ -0.35
DDB1-216ENST00000539739 SCN1BQ07699 218 aa12.87□□□□□ -0.35
DDB1-216ENST00000539739 TAF9Q16594 264 aa12.87□□□□□ -0.35
DDB1-216ENST00000539739 MPV17LQ2QL34 196 aa12.87□□□□□ -0.35
DDB1-216ENST00000539739 ZNF561Q8N587 486 aa12.87□□□□□ -0.35
DDB1-216ENST00000539739 CHST4Q8NCG5 386 aa12.87□□□□□ -0.35
DDB1-216ENST00000539739 OR8B3Q8NGG8 313 aa12.87□□□□□ -0.35
DDB1-216ENST00000539739 LGALS14Q8TCE9 139 aa12.87□□□□□ -0.35
DDB1-216ENST00000539739 RBPMSQ93062 196 aaKnown RBP12.87□□□□□ -0.35
DDB1-216ENST00000539739 NEIL1Q96FI4 390 aaPredicted RBP12.87□□□□□ -0.35
DDB1-216ENST00000539739 SDSLQ96GA7 329 aa12.87□□□□□ -0.35
DDB1-216ENST00000539739 Q96M66 194 aa12.87□□□□□ -0.35
DDB1-216ENST00000539739 OR8B2Q96RD0 313 aa12.87□□□□□ -0.35
DDB1-216ENST00000539739 SEC22CQ9BRL7 303 aa12.87□□□□□ -0.35
DDB1-216ENST00000539739 RANGRFQ9HD47 186 aaPredicted RBP12.87□□□□□ -0.35
DDB1-216ENST00000539739 SPATA2Q9UM82 520 aa12.87□□□□□ -0.35
DDB1-216ENST00000539739 SETXQ7Z333 2677 aaKnown RBP12.86□□□□□ -0.35
DDB1-216ENST00000539739 METTL21EPA6NDL7 271 aa12.86□□□□□ -0.35
DDB1-216ENST00000539739 FAM90A10PA6NDY2 464 aa12.86□□□□□ -0.35
DDB1-216ENST00000539739 FAM90A18PA6NE21 464 aa12.86□□□□□ -0.35
DDB1-216ENST00000539739 FAM90A16PA6NEW6 464 aa12.86□□□□□ -0.35
DDB1-216ENST00000539739 FAM90A20PA6NIJ5 464 aa12.86□□□□□ -0.35
DDB1-216ENST00000539739 FAM90A8PA6NJQ4 464 aa12.86□□□□□ -0.35
DDB1-216ENST00000539739 FAM90A7PA6NKC0 464 aa12.86□□□□□ -0.35
DDB1-216ENST00000539739 FAM90A22PA8MWA6 464 aa12.86□□□□□ -0.35
DDB1-216ENST00000539739 FAM90A12PA8MX19 464 aa12.86□□□□□ -0.35
DDB1-216ENST00000539739 FAM90A5PA8MXJ8 464 aa12.86□□□□□ -0.35
DDB1-216ENST00000539739 FAM90A23PA8MXZ1 464 aa12.86□□□□□ -0.35
DDB1-216ENST00000539739 RNF223E7ERA6 249 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms