RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 DECR2Q9NUI1 292 aa7.67□□□□□ -1.18
RTN4IP1-204ENST00000539449 NLKQ9UBE8 527 aa7.67□□□□□ -1.18
RTN4IP1-204ENST00000539449 DUX4Q9UBX2 424 aa7.67□□□□□ -1.18
RTN4IP1-204ENST00000539449 PPP1R3CQ9UQK1 317 aa7.67□□□□□ -1.18
RTN4IP1-204ENST00000539449 LAMP3Q9UQV4 416 aa7.67□□□□□ -1.18
RTN4IP1-204ENST00000539449 PLEKHA6Q9Y2H5 1048 aa7.67□□□□□ -1.18
RTN4IP1-204ENST00000539449 DSCAML1Q8TD84 2053 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 TMEM178BH3BS89 294 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 SH2D1BO14796 132 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 PSPNO60542 156 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 CA11O75493 328 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 KNG1P01042 644 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 CD3DP04234 171 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 ZNF735P0CB33 412 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 SELLP14151 372 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 NAT1P18440 290 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 TNFRSF1AP19438 455 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 LMO1P25800 156 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 HLA-DMAP28067 261 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 PRDX2P32119 198 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 CDKN1AP38936 164 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 INPP1P49441 399 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 CCR6P51684 374 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 COL10A1Q03692 680 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 RGS21Q2M5E4 152 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 AGAP6Q5VW22 663 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 C20orf204Q6ZNR8 217 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 Q6ZNX1 250 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 C17orf107Q6ZR85 190 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 NRARPQ7Z6K4 114 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 LINC00596Q86U02 117 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 FAM90A1Q86YD7 464 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 FGFRL1Q8N441 504 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 TMEM229BQ8NBD8 167 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 OR4C16Q8NGL9 310 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 OR11L1Q8NGX0 322 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 SETD6Q8TBK2 473 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 CCL17Q92583 94 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 ERGIC1Q969X5 290 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 CMSS1Q9BQ75 279 aaKnown RBP7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 OCSTAMPQ9BR26 566 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 ST6GALNAC5Q9BVH7 336 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 DPCDQ9BVM2 203 aaPredicted RBP7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 TINAGL1Q9GZM7 467 aaPredicted RBP7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 EGLN1Q9GZT9 426 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 CHST6Q9GZX3 395 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 PPA2Q9H2U2 334 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 IFT22Q9H7X7 185 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 PLEKHF2Q9H8W4 249 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 SAP30LQ9HAJ7 183 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 ING3Q9NXR8 418 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 RASL12Q9NYN1 266 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 ZNF222Q9UK12 451 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 MAB21L2Q9Y586 359 aa7.66□□□□□ -1.18
RTN4IP1-204ENST00000539449 OR2AT4A6NND4 320 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 SERPINE3A8MV23 424 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 MCRIP1C9JLW8 97 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 INAFM1C9JVW0 142 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 TNFRSF13BO14836 293 aaPredicted RBP7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 ZNF737O75373 536 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 FCN3O75636 299 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 RP2O75695 350 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 PMP2P02689 132 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 GYPAP02724 150 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 CD74P04233 296 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 FCGR3AP08637 254 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 SONP18583 2426 aaKnown RBP7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 RCVRNP35243 200 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 GABRA2P47869 451 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 OR3A1P47881 315 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 SSBP1Q04837 148 aaKnown RBP7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 DYRK1AQ13627 763 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 SMIM21Q3B7S5 101 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 PLA1AQ53H76 456 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 PAN3Q58A45 887 aaKnown RBP7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 SPIN3Q5JUX0 258 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 TEX36Q5VZQ5 186 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 STUMQ69YW2 141 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 STEAP1BQ6NZ63 245 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 LYPD2Q6UXB3 125 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 CCBE1Q6UXH8 406 aaPredicted RBP7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 HOGA1Q86XE5 327 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 OR4K15Q8NH41 348 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 OR56B4Q8NH76 319 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 ANGPTL6Q8NI99 470 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 MRPL30Q8TCC3 161 aaKnown RBP7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 NEK7Q8TDX7 302 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 IGFBPL1Q8WX77 278 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 COQ2Q96H96 371 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 COX4I2Q96KJ9 171 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 GAFA1Q96PS6 74 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 CCL13Q99616 98 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 SLC6A7Q99884 636 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 DCTN5Q9BTE1 182 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 SHARPINQ9H0F6 387 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 MMP28Q9H239 520 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 TMEM165Q9HC07 324 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 IFT46Q9NQC8 304 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 TMEM106BQ9NUM4 274 aa7.65□□□□□ -1.18
RTN4IP1-204ENST00000539449 ETAA1Q9NY74 926 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms