RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 ACSM6Q6P461 480 aa12.75□□□□□ -0.37
CACNB1-206ENST00000539338 CBLN2Q8IUK8 224 aa12.75□□□□□ -0.37
CACNB1-206ENST00000539338 TMEM218A2RU14 115 aa12.75□□□□□ -0.37
CACNB1-206ENST00000539338 C4orf51C9J302 202 aa12.75□□□□□ -0.37
CACNB1-206ENST00000539338 ERGP11308 486 aa12.75□□□□□ -0.37
CACNB1-206ENST00000539338 FAM3AP98173 230 aa12.75□□□□□ -0.37
CACNB1-206ENST00000539338 OR2M3Q8NG83 312 aa12.75□□□□□ -0.37
CACNB1-206ENST00000539338 ARG1P05089 322 aa12.74□□□□□ -0.37
CACNB1-206ENST00000539338 DAOP14920 347 aa12.74□□□□□ -0.37
CACNB1-206ENST00000539338 GALR1P47211 349 aa12.74□□□□□ -0.37
CACNB1-206ENST00000539338 GGTLC2Q14390 218 aa12.74□□□□□ -0.37
CACNB1-206ENST00000539338 GAPTQ8N292 157 aa12.74□□□□□ -0.37
CACNB1-206ENST00000539338 TM4SF19Q96DZ7 209 aa12.74□□□□□ -0.37
CACNB1-206ENST00000539338 KLK13Q9UKR3 277 aa12.74□□□□□ -0.37
CACNB1-206ENST00000539338 VSIG4Q9Y279 399 aa12.74□□□□□ -0.37
CACNB1-206ENST00000539338 AMDHD2Q9Y303 409 aa12.74□□□□□ -0.37
CACNB1-206ENST00000539338 LIPGQ9Y5X9 500 aa12.74□□□□□ -0.37
CACNB1-206ENST00000539338 MMP16P51512 607 aa12.74□□□□□ -0.37
CACNB1-206ENST00000539338 ETV3LQ6ZN32 361 aa12.74□□□□□ -0.37
CACNB1-206ENST00000539338 LIAT1Q6ZQX7 453 aa12.74□□□□□ -0.37
CACNB1-206ENST00000539338 ISOC2Q96AB3 205 aa12.74□□□□□ -0.37
CACNB1-206ENST00000539338 RSRP1Q9BUV0 290 aa12.74□□□□□ -0.37
CACNB1-206ENST00000539338 SF3B5Q9BWJ5 86 aaKnown RBP12.74□□□□□ -0.37
CACNB1-206ENST00000539338 TIMM9Q9Y5J7 89 aa12.74□□□□□ -0.37
CACNB1-206ENST00000539338 CABIN1Q9Y6J0 2220 aa12.74□□□□□ -0.37
CACNB1-206ENST00000539338 KCNAB3O43448 404 aa12.74□□□□□ -0.37
CACNB1-206ENST00000539338 CHRNA7P36544 502 aa12.74□□□□□ -0.37
CACNB1-206ENST00000539338 IGFBP7Q16270 282 aa12.74□□□□□ -0.37
CACNB1-206ENST00000539338 MOGAT2Q3SYC2 334 aa12.74□□□□□ -0.37
CACNB1-206ENST00000539338 SLC22A18ASQ8N1D0 253 aa12.74□□□□□ -0.37
CACNB1-206ENST00000539338 HDHD3Q9BSH5 251 aaPredicted RBP12.74□□□□□ -0.37
CACNB1-206ENST00000539338 PTPRFP10586 1907 aa12.74□□□□□ -0.37
CACNB1-206ENST00000539338 CHST1O43916 411 aa12.74□□□□□ -0.37
CACNB1-206ENST00000539338 B3GALNT1O75752 331 aa12.74□□□□□ -0.37
CACNB1-206ENST00000539338 OR10AD1Q8NGE0 317 aa12.74□□□□□ -0.37
CACNB1-206ENST00000539338 OR6S1Q8NH40 331 aa12.74□□□□□ -0.37
CACNB1-206ENST00000539338 CCL28Q9NRJ3 127 aa12.74□□□□□ -0.37
CACNB1-206ENST00000539338 MPC1Q9Y5U8 109 aa12.74□□□□□ -0.37
CACNB1-206ENST00000539338 TRAV39A0A0B4J263 110 aa12.73□□□□□ -0.37
CACNB1-206ENST00000539338 TRDCB7Z8K6 153 aa12.73□□□□□ -0.37
CACNB1-206ENST00000539338 HRASP01112 189 aa12.73□□□□□ -0.37
CACNB1-206ENST00000539338 CST2P09228 141 aa12.73□□□□□ -0.37
CACNB1-206ENST00000539338 ZNF154Q13106 437 aa12.73□□□□□ -0.37
CACNB1-206ENST00000539338 LAIR2Q6ISS4 152 aa12.73□□□□□ -0.37
CACNB1-206ENST00000539338 OR10G4Q8NGN3 311 aa12.73□□□□□ -0.37
CACNB1-206ENST00000539338 OR10G9Q8NGN4 311 aa12.73□□□□□ -0.37
CACNB1-206ENST00000539338 OR10G7Q8NGN6 311 aa12.73□□□□□ -0.37
CACNB1-206ENST00000539338 JMJD8Q96S16 334 aa12.73□□□□□ -0.37
CACNB1-206ENST00000539338 LPAR3Q9UBY5 353 aa12.73□□□□□ -0.37
CACNB1-206ENST00000539338 PPYP01298 95 aa12.73□□□□□ -0.37
CACNB1-206ENST00000539338 ASAH2BP0C7U1 165 aa12.73□□□□□ -0.37
CACNB1-206ENST00000539338 VMA21Q3ZAQ7 101 aa12.73□□□□□ -0.37
CACNB1-206ENST00000539338 LYZL2Q7Z4W2 148 aa12.73□□□□□ -0.37
CACNB1-206ENST00000539338 ZNF385AQ96PM9 386 aaKnown RBP12.73□□□□□ -0.37
CACNB1-206ENST00000539338 OR2H1Q9GZK4 316 aa12.73□□□□□ -0.37
CACNB1-206ENST00000539338 SLC2A9Q9NRM0 540 aa12.73□□□□□ -0.37
CACNB1-206ENST00000539338 POMT1Q9Y6A1 747 aa12.73□□□□□ -0.37
CACNB1-206ENST00000539338 C7orf66A4D0T2 115 aa12.73□□□□□ -0.37
CACNB1-206ENST00000539338 RBFOX3A6NFN3 312 aa12.73□□□□□ -0.37
CACNB1-206ENST00000539338 NKX2-8O15522 239 aa12.73□□□□□ -0.37
CACNB1-206ENST00000539338 RAB5AP20339 215 aa12.73□□□□□ -0.37
CACNB1-206ENST00000539338 SUMO1P63165 101 aaKnown RBP12.73□□□□□ -0.37
CACNB1-206ENST00000539338 OR5I1Q13606 314 aa12.73□□□□□ -0.37
CACNB1-206ENST00000539338 SLC36A1Q7Z2H8 476 aa12.73□□□□□ -0.37
CACNB1-206ENST00000539338 SLC24A4Q8NFF2 622 aa12.73□□□□□ -0.37
CACNB1-206ENST00000539338 PILRAQ9UKJ1 303 aa12.73□□□□□ -0.37
CACNB1-206ENST00000539338 SEC14L6B5MCN3 397 aa12.73□□□□□ -0.37
CACNB1-206ENST00000539338 TTRP02766 147 aa12.73□□□□□ -0.37
CACNB1-206ENST00000539338 PMCHP20382 165 aa12.73□□□□□ -0.37
CACNB1-206ENST00000539338 OPRK1P41145 380 aa12.73□□□□□ -0.37
CACNB1-206ENST00000539338 AWAT1Q58HT5 328 aa12.73□□□□□ -0.37
CACNB1-206ENST00000539338 AMELYQ99218 206 aa12.73□□□□□ -0.37
CACNB1-206ENST00000539338 DNAJC13O75165 2243 aa12.73□□□□□ -0.37
CACNB1-206ENST00000539338 DSPPQ9NZW4 1301 aa12.73□□□□□ -0.37
CACNB1-206ENST00000539338 CDIPTO14735 213 aa12.72□□□□□ -0.37
CACNB1-206ENST00000539338 VSIG10L2P0DP72 767 aa12.72□□□□□ -0.37
CACNB1-206ENST00000539338 SPP1P10451 314 aa12.72□□□□□ -0.37
CACNB1-206ENST00000539338 LIFP15018 202 aa12.72□□□□□ -0.37
CACNB1-206ENST00000539338 P2RY1P47900 373 aa12.72□□□□□ -0.37
CACNB1-206ENST00000539338 CDC34P49427 236 aaPredicted RBP12.72□□□□□ -0.37
CACNB1-206ENST00000539338 TDRD15B5MCY1 1934 aaKnown RBP12.72□□□□□ -0.37
CACNB1-206ENST00000539338 C16orf97H3BN30 126 aa12.72□□□□□ -0.37
CACNB1-206ENST00000539338 CCL17Q92583 94 aa12.72□□□□□ -0.37
CACNB1-206ENST00000539338 FAM210BQ96KR6 192 aa12.72□□□□□ -0.37
CACNB1-206ENST00000539338 MYO16Q9Y6X6 1858 aa12.72□□□□□ -0.37
CACNB1-206ENST00000539338 IL24Q13007 206 aa12.72□□□□□ -0.37
CACNB1-206ENST00000539338 DCAF12L2Q5VW00 463 aa12.72□□□□□ -0.37
CACNB1-206ENST00000539338 MISP3Q96FF7 219 aa12.72□□□□□ -0.37
CACNB1-206ENST00000539338 GPR35Q9HC97 309 aa12.72□□□□□ -0.37
CACNB1-206ENST00000539338 A0A1W2PNV4 684 aa12.72□□□□□ -0.37
CACNB1-206ENST00000539338 LINC00862A6NCI5 91 aa12.72□□□□□ -0.37
CACNB1-206ENST00000539338 SYNGR2O43760 224 aa12.72□□□□□ -0.37
CACNB1-206ENST00000539338 HLA-DQB1P01920 261 aa12.72□□□□□ -0.37
CACNB1-206ENST00000539338 RBP4P02753 201 aa12.72□□□□□ -0.37
CACNB1-206ENST00000539338 SSX7Q7RTT5 188 aa12.72□□□□□ -0.37
CACNB1-206ENST00000539338 NDFIP1Q9BT67 221 aa12.72□□□□□ -0.37
CACNB1-206ENST00000539338 TRPM7Q96QT4 1865 aa12.72□□□□□ -0.37
CACNB1-206ENST00000539338 MYPOPQ86VE0 399 aaPredicted RBP12.71□□□□□ -0.37
CACNB1-206ENST00000539338 TRAV20A0A0B4J274 112 aa12.71□□□□□ -0.37
CACNB1-206ENST00000539338 ST8SIA5O15466 376 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms