RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 A0A1W2PQL4 384 aaPredicted RBP1.11□□□□□ -2.23
CCDC7-208ENST00000537047 KDELR3O43731 214 aa1.11□□□□□ -2.23
CCDC7-208ENST00000537047 GZMBP10144 247 aa1.11□□□□□ -2.23
CCDC7-208ENST00000537047 GABRA1P14867 456 aa1.11□□□□□ -2.23
CCDC7-208ENST00000537047 XKP51811 444 aa1.11□□□□□ -2.23
CCDC7-208ENST00000537047 DYNC1I2Q13409 638 aaKnown RBP1.11□□□□□ -2.23
CCDC7-208ENST00000537047 GOLGA7BQ2TAP0 167 aa1.11□□□□□ -2.23
CCDC7-208ENST00000537047 NKAIN1Q4KMZ8 207 aa1.11□□□□□ -2.23
CCDC7-208ENST00000537047 ACTBL2Q562R1 376 aa1.11□□□□□ -2.23
CCDC7-208ENST00000537047 C10orf91Q5T1B1 145 aa1.11□□□□□ -2.23
CCDC7-208ENST00000537047 NXNL2Q5VZ03 156 aa1.11□□□□□ -2.23
CCDC7-208ENST00000537047 LAIR2Q6ISS4 152 aa1.11□□□□□ -2.23
CCDC7-208ENST00000537047 ASCL4Q6XD76 172 aa1.11□□□□□ -2.23
CCDC7-208ENST00000537047 TCAIMQ8N3R3 496 aa1.11□□□□□ -2.23
CCDC7-208ENST00000537047 OR4C16Q8NGL9 310 aa1.11□□□□□ -2.23
CCDC7-208ENST00000537047 MAL2Q969L2 176 aa1.11□□□□□ -2.23
CCDC7-208ENST00000537047 TOP1MTQ969P6 601 aa1.11□□□□□ -2.23
CCDC7-208ENST00000537047 GAL3ST2Q9H3Q3 398 aa1.11□□□□□ -2.23
CCDC7-208ENST00000537047 KCNIP2Q9NS61 270 aa1.11□□□□□ -2.23
CCDC7-208ENST00000537047 FAM206AQ9NX38 181 aa1.11□□□□□ -2.23
CCDC7-208ENST00000537047 VAPAQ9P0L0 249 aa1.11□□□□□ -2.23
CCDC7-208ENST00000537047 SLC23A2Q9UGH3 650 aa1.11□□□□□ -2.23
CCDC7-208ENST00000537047 URGCP-MRPS24S4R325 110 aa1.11□□□□□ -2.23
CCDC7-208ENST00000537047 GBF1Q92538 1859 aa1.11□□□□□ -2.23
CCDC7-208ENST00000537047 NRCAMQ92823 1304 aa1.11□□□□□ -2.23
CCDC7-208ENST00000537047 SIGLEC16A6NMB1 481 aa1.1□□□□□ -2.23
CCDC7-208ENST00000537047 E7EWF7 191 aa1.1□□□□□ -2.23
CCDC7-208ENST00000537047 FNDC10F2Z333 226 aa1.1□□□□□ -2.23
CCDC7-208ENST00000537047 F8VP50 259 aa1.1□□□□□ -2.23
CCDC7-208ENST00000537047 PLPP3O14495 311 aa1.1□□□□□ -2.23
CCDC7-208ENST00000537047 GMDSO60547 372 aa1.1□□□□□ -2.23
CCDC7-208ENST00000537047 LIPCP11150 499 aa1.1□□□□□ -2.23
CCDC7-208ENST00000537047 COILP38432 576 aaPredicted RBP1.1□□□□□ -2.23
CCDC7-208ENST00000537047 MAGEA3P43357 314 aa1.1□□□□□ -2.23
CCDC7-208ENST00000537047 CEACAM16Q2WEN9 425 aa1.1□□□□□ -2.23
CCDC7-208ENST00000537047 GLYATQ6IB77 296 aa1.1□□□□□ -2.23
CCDC7-208ENST00000537047 SCXQ7RTU7 201 aa1.1□□□□□ -2.23
CCDC7-208ENST00000537047 GAPTQ8N292 157 aa1.1□□□□□ -2.23
CCDC7-208ENST00000537047 OR10P1Q8NGE3 313 aa1.1□□□□□ -2.23
CCDC7-208ENST00000537047 OR13C9Q8NGT0 318 aa1.1□□□□□ -2.23
CCDC7-208ENST00000537047 OR6N2Q8NGY6 317 aa1.1□□□□□ -2.23
CCDC7-208ENST00000537047 CASTOR1Q8WTX7 329 aa1.1□□□□□ -2.23
CCDC7-208ENST00000537047 KIAA1143Q96AT1 154 aaPredicted RBP1.1□□□□□ -2.23
CCDC7-208ENST00000537047 OLFM3Q96PB7 478 aa1.1□□□□□ -2.23
CCDC7-208ENST00000537047 VAT1Q99536 393 aa1.1□□□□□ -2.23
CCDC7-208ENST00000537047 CHID1Q9BWS9 393 aa1.1□□□□□ -2.23
CCDC7-208ENST00000537047 TM6SF2Q9BZW4 377 aa1.1□□□□□ -2.23
CCDC7-208ENST00000537047 CHRNA10Q9GZZ6 450 aa1.1□□□□□ -2.23
CCDC7-208ENST00000537047 ANKHQ9HCJ1 492 aa1.1□□□□□ -2.23
CCDC7-208ENST00000537047 VCX3AQ9NNX9 186 aa1.1□□□□□ -2.23
CCDC7-208ENST00000537047 ACOT13Q9NPJ3 140 aa1.1□□□□□ -2.23
CCDC7-208ENST00000537047 RBM12B-AS1Q9P1G2 102 aa1.1□□□□□ -2.23
CCDC7-208ENST00000537047 RP1L1Q8IWN7 2480 aaPredicted RBP1.1□□□□□ -2.23
CCDC7-208ENST00000537047 MED13Q9UHV7 2174 aa1.1□□□□□ -2.23
CCDC7-208ENST00000537047 POLR3AO14802 1390 aaPredicted RBP1.09□□□□□ -2.23
CCDC7-208ENST00000537047 GSTTP1A0A1W2PQM5 241 aa1.09□□□□□ -2.23
CCDC7-208ENST00000537047 TVP23AA6NH52 213 aa1.09□□□□□ -2.23
CCDC7-208ENST00000537047 OTCP00480 354 aa1.09□□□□□ -2.23
CCDC7-208ENST00000537047 ANGP03950 147 aaKnown RBP1.09□□□□□ -2.23
CCDC7-208ENST00000537047 CRYGCP07315 174 aa1.09□□□□□ -2.23
CCDC7-208ENST00000537047 STAG3L2P0CL84 134 aa1.09□□□□□ -2.23
CCDC7-208ENST00000537047 CPMP14384 443 aa1.09□□□□□ -2.23
CCDC7-208ENST00000537047 DSTNP60981 165 aa1.09□□□□□ -2.23
CCDC7-208ENST00000537047 CEACAM21Q3KPI0 293 aa1.09□□□□□ -2.23
CCDC7-208ENST00000537047 ZCWPW2Q504Y3 356 aa1.09□□□□□ -2.23
CCDC7-208ENST00000537047 RESP18Q5W5W9 173 aa1.09□□□□□ -2.23
CCDC7-208ENST00000537047 C10orf107Q8IVU9 208 aa1.09□□□□□ -2.23
CCDC7-208ENST00000537047 ZNF321PQ8N8H1 164 aa1.09□□□□□ -2.23
CCDC7-208ENST00000537047 OR4A15Q8NGL6 344 aa1.09□□□□□ -2.23
CCDC7-208ENST00000537047 OR6K2Q8NGY2 324 aa1.09□□□□□ -2.23
CCDC7-208ENST00000537047 CCL17Q92583 94 aa1.09□□□□□ -2.23
CCDC7-208ENST00000537047 FMC1Q96HJ9 113 aa1.09□□□□□ -2.23
CCDC7-208ENST00000537047 CPB2Q96IY4 423 aa1.09□□□□□ -2.23
CCDC7-208ENST00000537047 ADTRPQ96IZ2 230 aa1.09□□□□□ -2.23
CCDC7-208ENST00000537047 MAP1LC3CQ9BXW4 147 aa1.09□□□□□ -2.23
CCDC7-208ENST00000537047 NXF2Q9GZY0 626 aaKnown RBP1.09□□□□□ -2.23
CCDC7-208ENST00000537047 SLC25A31Q9H0C2 315 aa1.09□□□□□ -2.23
CCDC7-208ENST00000537047 CXCL16Q9H2A7 254 aa1.09□□□□□ -2.23
CCDC7-208ENST00000537047 DIABLOQ9NR28 239 aa1.09□□□□□ -2.23
CCDC7-208ENST00000537047 SDHAF2Q9NX18 166 aa1.09□□□□□ -2.23
CCDC7-208ENST00000537047 RPUSD1Q9UJJ7 312 aaKnown RBP1.09□□□□□ -2.23
CCDC7-208ENST00000537047 AK9Q5TCS8 1911 aa1.09□□□□□ -2.24
CCDC7-208ENST00000537047 CR1P17927 2039 aa1.08□□□□□ -2.24
CCDC7-208ENST00000537047 PTPRKQ15262 1439 aa1.08□□□□□ -2.24
CCDC7-208ENST00000537047 PGPA6NDG6 321 aa1.08□□□□□ -2.24
CCDC7-208ENST00000537047 RBFOX3A6NFN3 312 aa1.08□□□□□ -2.24
CCDC7-208ENST00000537047 ARGFXA6NJG6 315 aa1.08□□□□□ -2.24
CCDC7-208ENST00000537047 RFXANKO14593 260 aa1.08□□□□□ -2.24
CCDC7-208ENST00000537047 LECT2O14960 151 aa1.08□□□□□ -2.24
CCDC7-208ENST00000537047 SLC25A20O43772 301 aa1.08□□□□□ -2.24
CCDC7-208ENST00000537047 CD8AP01732 235 aa1.08□□□□□ -2.24
CCDC7-208ENST00000537047 BGNP21810 368 aa1.08□□□□□ -2.24
CCDC7-208ENST00000537047 CPN2P22792 545 aa1.08□□□□□ -2.24
CCDC7-208ENST00000537047 TTPAP49638 278 aa1.08□□□□□ -2.24
CCDC7-208ENST00000537047 C2orf80Q0P641 193 aa1.08□□□□□ -2.24
CCDC7-208ENST00000537047 HNRNPA1L2Q32P51 320 aaKnown RBP1.08□□□□□ -2.24
CCDC7-208ENST00000537047 Q6ZRU5 148 aa1.08□□□□□ -2.24
CCDC7-208ENST00000537047 TPGS1Q6ZTW0 290 aa1.08□□□□□ -2.24
CCDC7-208ENST00000537047 FAM58AQ8N1B3 248 aa1.08□□□□□ -2.24
CCDC7-208ENST00000537047 ATPAF2Q8N5M1 289 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms