RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 RNLSQ5VYX0 342 aa11.53□□□□□ -0.56
UBE3B-206ENST00000536398 BRICD5Q6PL45 260 aa11.53□□□□□ -0.56
UBE3B-206ENST00000536398 CCBE1Q6UXH8 406 aaPredicted RBP11.53□□□□□ -0.56
UBE3B-206ENST00000536398 PLPPR1Q8TBJ4 325 aa11.53□□□□□ -0.56
UBE3B-206ENST00000536398 MUL1Q969V5 352 aa11.53□□□□□ -0.56
UBE3B-206ENST00000536398 MALSU1Q96EH3 234 aa11.53□□□□□ -0.56
UBE3B-206ENST00000536398 CPNE2Q96FN4 548 aaPredicted RBP11.53□□□□□ -0.56
UBE3B-206ENST00000536398 CYYR1Q96J86 154 aa11.53□□□□□ -0.56
UBE3B-206ENST00000536398 ST3GAL6Q9Y274 331 aa11.53□□□□□ -0.56
UBE3B-206ENST00000536398 LSM2Q9Y333 95 aaKnown RBP11.53□□□□□ -0.56
UBE3B-206ENST00000536398 SIGLEC9Q9Y336 463 aa11.53□□□□□ -0.56
UBE3B-206ENST00000536398 HILPDAQ9Y5L2 63 aa11.53□□□□□ -0.56
UBE3B-206ENST00000536398 A0A1B0GUS0 222 aa11.52□□□□□ -0.57
UBE3B-206ENST00000536398 FUOMA2VDF0 154 aa11.52□□□□□ -0.57
UBE3B-206ENST00000536398 GEMIN2O14893 280 aaKnown RBP11.52□□□□□ -0.57
UBE3B-206ENST00000536398 CHST1O43916 411 aa11.52□□□□□ -0.57
UBE3B-206ENST00000536398 TSPAN9O75954 239 aa11.52□□□□□ -0.57
UBE3B-206ENST00000536398 CD1AP06126 327 aa11.52□□□□□ -0.57
UBE3B-206ENST00000536398 FSTP19883 344 aa11.52□□□□□ -0.57
UBE3B-206ENST00000536398 MYF6P23409 242 aa11.52□□□□□ -0.57
UBE3B-206ENST00000536398 SLC35A2P78381 396 aa11.52□□□□□ -0.57
UBE3B-206ENST00000536398 IRF3Q14653 427 aa11.52□□□□□ -0.57
UBE3B-206ENST00000536398 SLC22A6Q4U2R8 563 aa11.52□□□□□ -0.57
UBE3B-206ENST00000536398 FAM27D1Q5T7N8 215 aa11.52□□□□□ -0.57
UBE3B-206ENST00000536398 HEPN1Q6WQI6 88 aa11.52□□□□□ -0.57
UBE3B-206ENST00000536398 ABHD12Q8N2K0 398 aa11.52□□□□□ -0.57
UBE3B-206ENST00000536398 OSR2Q8N2R0 312 aa11.52□□□□□ -0.57
UBE3B-206ENST00000536398 JAGN1Q8N5M9 183 aa11.52□□□□□ -0.57
UBE3B-206ENST00000536398 SUMF2Q8NBJ7 301 aa11.52□□□□□ -0.57
UBE3B-206ENST00000536398 OR13A1Q8NGR1 328 aa11.52□□□□□ -0.57
UBE3B-206ENST00000536398 MYDGFQ969H8 173 aa11.52□□□□□ -0.57
UBE3B-206ENST00000536398 MND1Q9BWT6 205 aa11.52□□□□□ -0.57
UBE3B-206ENST00000536398 CDCA4Q9BXL8 241 aa11.52□□□□□ -0.57
UBE3B-206ENST00000536398 CLEC7AQ9BXN2 247 aa11.52□□□□□ -0.57
UBE3B-206ENST00000536398 C16orf95Q9H693 158 aa11.52□□□□□ -0.57
UBE3B-206ENST00000536398 TAS2R3Q9NYW6 316 aa11.52□□□□□ -0.57
UBE3B-206ENST00000536398 IL36GQ9NZH8 169 aa11.52□□□□□ -0.57
UBE3B-206ENST00000536398 CKLFQ9UBR5 152 aa11.52□□□□□ -0.57
UBE3B-206ENST00000536398 KIF25Q9UIL4 384 aa11.52□□□□□ -0.57
UBE3B-206ENST00000536398 TBL2Q9Y4P3 447 aaKnown RBP11.52□□□□□ -0.57
UBE3B-206ENST00000536398 NBEAL1Q6ZS30 2694 aa11.52□□□□□ -0.57
UBE3B-206ENST00000536398 MEIKINA0A087WXM9 373 aa11.51□□□□□ -0.57
UBE3B-206ENST00000536398 VGLL3A8MV65 326 aa11.51□□□□□ -0.57
UBE3B-206ENST00000536398 CGB3P0DN86 165 aa11.51□□□□□ -0.57
UBE3B-206ENST00000536398 CGB7P0DN87 165 aa11.51□□□□□ -0.57
UBE3B-206ENST00000536398 RBM11P57052 281 aaKnown RBP11.51□□□□□ -0.57
UBE3B-206ENST00000536398 AANATQ16613 207 aa11.51□□□□□ -0.57
UBE3B-206ENST00000536398 RSBN1Q5VWQ0 802 aaPredicted RBP11.51□□□□□ -0.57
UBE3B-206ENST00000536398 GLIPR1L1Q6UWM5 242 aa11.51□□□□□ -0.57
UBE3B-206ENST00000536398 IZUMO2Q6UXV1 221 aa11.51□□□□□ -0.57
UBE3B-206ENST00000536398 TMEM219Q86XT9 240 aa11.51□□□□□ -0.57
UBE3B-206ENST00000536398 LYPD6Q86Y78 171 aa11.51□□□□□ -0.57
UBE3B-206ENST00000536398 OR4D6Q8NGJ1 314 aa11.51□□□□□ -0.57
UBE3B-206ENST00000536398 OR4P4Q8NGL7 312 aa11.51□□□□□ -0.57
UBE3B-206ENST00000536398 FOXRED1Q96CU9 486 aaPredicted RBP11.51□□□□□ -0.57
UBE3B-206ENST00000536398 TMED9Q9BVK6 235 aa11.51□□□□□ -0.57
UBE3B-206ENST00000536398 DPCDQ9BVM2 203 aaPredicted RBP11.51□□□□□ -0.57
UBE3B-206ENST00000536398 ANKRD60Q9BZ19 345 aa11.51□□□□□ -0.57
UBE3B-206ENST00000536398 GAL3ST2Q9H3Q3 398 aa11.51□□□□□ -0.57
UBE3B-206ENST00000536398 DUSP21Q9H596 190 aa11.51□□□□□ -0.57
UBE3B-206ENST00000536398 ZNF286AQ9HBT8 521 aa11.51□□□□□ -0.57
UBE3B-206ENST00000536398 SCN3BQ9NY72 215 aa11.51□□□□□ -0.57
UBE3B-206ENST00000536398 FOXJ3Q9UPW0 622 aa11.51□□□□□ -0.57
UBE3B-206ENST00000536398 MRPS28Q9Y2Q9 187 aaKnown RBP11.51□□□□□ -0.57
UBE3B-206ENST00000536398 A6NDX4 124 aa11.5□□□□□ -0.57
UBE3B-206ENST00000536398 OR7C1O76099 320 aaPredicted RBP11.5□□□□□ -0.57
UBE3B-206ENST00000536398 CSTBP04080 98 aaKnown RBP11.5□□□□□ -0.57
UBE3B-206ENST00000536398 NFYBP25208 207 aa11.5□□□□□ -0.57
UBE3B-206ENST00000536398 VHLP40337 213 aa11.5□□□□□ -0.57
UBE3B-206ENST00000536398 GLP1RP43220 463 aa11.5□□□□□ -0.57
UBE3B-206ENST00000536398 SPHARQ15513 63 aa11.5□□□□□ -0.57
UBE3B-206ENST00000536398 MED22Q15528 200 aa11.5□□□□□ -0.57
UBE3B-206ENST00000536398 LTC4SQ16873 150 aa11.5□□□□□ -0.57
UBE3B-206ENST00000536398 ACSM3Q53FZ2 586 aa11.5□□□□□ -0.57
UBE3B-206ENST00000536398 NHLRC3Q5JS37 347 aa11.5□□□□□ -0.57
UBE3B-206ENST00000536398 PRR31Q5SQ13 230 aa11.5□□□□□ -0.57
UBE3B-206ENST00000536398 HIST2H2BDQ6DRA6 164 aa11.5□□□□□ -0.57
UBE3B-206ENST00000536398 UNQ9370/PRO34162Q6UXP9 181 aa11.5□□□□□ -0.57
UBE3B-206ENST00000536398 NDNFQ8TB73 568 aa11.5□□□□□ -0.57
UBE3B-206ENST00000536398 LEAP2Q969E1 77 aa11.5□□□□□ -0.57
UBE3B-206ENST00000536398 S100A13Q99584 98 aa11.5□□□□□ -0.57
UBE3B-206ENST00000536398 CITED1Q99966 193 aa11.5□□□□□ -0.57
UBE3B-206ENST00000536398 BANF2Q9H503 90 aa11.5□□□□□ -0.57
UBE3B-206ENST00000536398 ZNF696Q9H7X3 374 aa11.5□□□□□ -0.57
UBE3B-206ENST00000536398 KBTBD11-OT1A0A1B0GTJ5 212 aa11.49□□□□□ -0.57
UBE3B-206ENST00000536398 ZNF729A6NN14 1252 aaPredicted RBP11.49□□□□□ -0.57
UBE3B-206ENST00000536398 H0YHG0 523 aa11.49□□□□□ -0.57
UBE3B-206ENST00000536398 IGLV1-47P01700 117 aa11.49□□□□□ -0.57
UBE3B-206ENST00000536398 IGHV3-7P01780 117 aa11.49□□□□□ -0.57
UBE3B-206ENST00000536398 MAP2K4P45985 399 aa11.49□□□□□ -0.57
UBE3B-206ENST00000536398 BDH1Q02338 343 aa11.49□□□□□ -0.57
UBE3B-206ENST00000536398 ATAD3CQ5T2N8 411 aa11.49□□□□□ -0.57
UBE3B-206ENST00000536398 MINOS1Q5TGZ0 78 aa11.49□□□□□ -0.57
UBE3B-206ENST00000536398 OR52W1Q6IF63 320 aa11.49□□□□□ -0.57
UBE3B-206ENST00000536398 RFESDQ8TAC1 157 aa11.49□□□□□ -0.57
UBE3B-206ENST00000536398 MRGPRDQ8TDS7 321 aa11.49□□□□□ -0.57
UBE3B-206ENST00000536398 TMEM203Q969S6 136 aa11.49□□□□□ -0.57
UBE3B-206ENST00000536398 BARHL1Q9BZE3 327 aa11.49□□□□□ -0.57
UBE3B-206ENST00000536398 IFT22Q9H7X7 185 aa11.49□□□□□ -0.57
UBE3B-206ENST00000536398 CALYQ9NYX4 217 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms