RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 SLC16A12Q6ZSM3 486 aa9.93□□□□□ -0.82
CHD4-203ENST00000535717 OR2W3Q7Z3T1 314 aa9.93□□□□□ -0.82
CHD4-203ENST00000535717 BPIFB2Q8N4F0 458 aa9.93□□□□□ -0.82
CHD4-203ENST00000535717 KIR3DL3Q8N743 410 aa9.93□□□□□ -0.82
CHD4-203ENST00000535717 TPRX1Q8N7U7 411 aa9.93□□□□□ -0.82
CHD4-203ENST00000535717 SUMF2Q8NBJ7 301 aa9.93□□□□□ -0.82
CHD4-203ENST00000535717 COQ2Q96H96 371 aa9.93□□□□□ -0.82
CHD4-203ENST00000535717 DMRTB1Q96MA1 342 aa9.93□□□□□ -0.82
CHD4-203ENST00000535717 WDFY2Q96P53 400 aa9.93□□□□□ -0.82
CHD4-203ENST00000535717 DPCDQ9BVM2 203 aaPredicted RBP9.93□□□□□ -0.82
CHD4-203ENST00000535717 SIRPDQ9H106 197 aa9.93□□□□□ -0.82
CHD4-203ENST00000535717 LPAR3Q9UBY5 353 aa9.93□□□□□ -0.82
CHD4-203ENST00000535717 A0A0B4J203 849 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 MEX3AA1L020 520 aaKnown RBP9.92□□□□□ -0.82
CHD4-203ENST00000535717 FAM90A10PA6NDY2 464 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 FAM90A18PA6NE21 464 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 FAM90A16PA6NEW6 464 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 CCDC160A6NGH7 325 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 FAM90A20PA6NIJ5 464 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 FAM90A8PA6NJQ4 464 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 FAM90A7PA6NKC0 464 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 FAM90A22PA8MWA6 464 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 FAM90A12PA8MX19 464 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 FAM90A5PA8MXJ8 464 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 FAM90A23PA8MXZ1 464 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 BOLA2-SMG1P6H3BVE0 249 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 LDLRAD4O15165 306 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 TOX4O94842 621 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 FSHBP01225 129 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 FAM90A15PP0C7V4 464 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 FAM90A13PP0C7W8 464 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 FAM90A14PP0C7W9 464 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 FAM90A24PP0C7X0 464 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 ERP29P30040 261 aaKnown RBP9.92□□□□□ -0.82
CHD4-203ENST00000535717 GLIPR1P48060 266 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 MEF2CQ06413 473 aaPredicted RBP9.92□□□□□ -0.82
CHD4-203ENST00000535717 PLA2G7Q13093 441 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 ZNF273Q14593 569 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 ATXN7L3Q14CW9 347 aaPredicted RBP9.92□□□□□ -0.82
CHD4-203ENST00000535717 CHRFAM7AQ494W8 412 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 ATAD3CQ5T2N8 411 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 METTL11BQ5VVY1 283 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 SIGIRRQ6IA17 410 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 BRICD5Q6PL45 260 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 TCF23Q7RTU1 214 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 Q8N7P7 452 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 UPRTQ96BW1 309 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 TBX15Q96SF7 602 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 NICN1Q9BSH3 213 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 PCGF1Q9BSM1 259 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 TMEM59Q9BXS4 323 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 NAA50Q9GZZ1 169 aaKnown RBP9.92□□□□□ -0.82
CHD4-203ENST00000535717 ING3Q9NXR8 418 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 RCC2Q9P258 522 aaKnown RBP9.92□□□□□ -0.82
CHD4-203ENST00000535717 FBLN5Q9UBX5 448 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 KPTNQ9Y664 436 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 DSCAML1Q8TD84 2053 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 JMJD1CQ15652 2540 aa9.92□□□□□ -0.82
CHD4-203ENST00000535717 hCG_2014768A0A024R1R8 64 aa9.91□□□□□ -0.82
CHD4-203ENST00000535717 A0A0A6YYD4 124 aa9.91□□□□□ -0.82
CHD4-203ENST00000535717 TMEM272A0A1B0GTI8 110 aa9.91□□□□□ -0.82
CHD4-203ENST00000535717 CCL3L1P16619 93 aa9.91□□□□□ -0.82
CHD4-203ENST00000535717 SRP14P37108 136 aaKnown RBP9.91□□□□□ -0.82
CHD4-203ENST00000535717 DLX6P56179 175 aa9.91□□□□□ -0.82
CHD4-203ENST00000535717 VBP1P61758 197 aa9.91□□□□□ -0.82
CHD4-203ENST00000535717 NCS1P62166 190 aa9.91□□□□□ -0.82
CHD4-203ENST00000535717 KLF17Q5JT82 389 aaPredicted RBP9.91□□□□□ -0.82
CHD4-203ENST00000535717 KRBOX4Q5JUW0 171 aa9.91□□□□□ -0.82
CHD4-203ENST00000535717 GPR107Q5VW38 600 aa9.91□□□□□ -0.82
CHD4-203ENST00000535717 THOC7Q6I9Y2 204 aaKnown RBP9.91□□□□□ -0.82
CHD4-203ENST00000535717 RAB12Q6IQ22 244 aa9.91□□□□□ -0.82
CHD4-203ENST00000535717 SFXN4Q6P4A7 337 aa9.91□□□□□ -0.82
CHD4-203ENST00000535717 C1orf122Q6ZSJ8 110 aa9.91□□□□□ -0.82
CHD4-203ENST00000535717 ANKRD13BQ86YJ7 626 aa9.91□□□□□ -0.82
CHD4-203ENST00000535717 CMTM4Q8IZR5 234 aa9.91□□□□□ -0.82
CHD4-203ENST00000535717 NANPQ8TBE9 248 aa9.91□□□□□ -0.82
CHD4-203ENST00000535717 PLPPR1Q8TBJ4 325 aa9.91□□□□□ -0.82
CHD4-203ENST00000535717 POM121Q96HA1 1249 aa9.91□□□□□ -0.82
CHD4-203ENST00000535717 CYYR1Q96J86 154 aa9.91□□□□□ -0.82
CHD4-203ENST00000535717 NEURL2Q9BR09 285 aa9.91□□□□□ -0.82
CHD4-203ENST00000535717 TM2D1Q9BX74 207 aa9.91□□□□□ -0.82
CHD4-203ENST00000535717 LPAR5Q9H1C0 372 aa9.91□□□□□ -0.82
CHD4-203ENST00000535717 LIN7BQ9HAP6 207 aa9.91□□□□□ -0.82
CHD4-203ENST00000535717 SPACA1Q9HBV2 294 aa9.91□□□□□ -0.82
CHD4-203ENST00000535717 DAPK2Q9UIK4 370 aa9.91□□□□□ -0.82
CHD4-203ENST00000535717 PEX16Q9Y5Y5 336 aa9.91□□□□□ -0.82
CHD4-203ENST00000535717 hADV38S2A0JD32 116 aa9.9□□□□□ -0.82
CHD4-203ENST00000535717 ODAMA1E959 279 aa9.9□□□□□ -0.82
CHD4-203ENST00000535717 M0R1W7 72 aa9.9□□□□□ -0.82
CHD4-203ENST00000535717 PDCD6O75340 191 aa9.9□□□□□ -0.82
CHD4-203ENST00000535717 GABARAPO95166 117 aa9.9□□□□□ -0.82
CHD4-203ENST00000535717 IGHV4-38-2P0DP08 117 aa9.9□□□□□ -0.82
CHD4-203ENST00000535717 SRD5A1P18405 259 aa9.9□□□□□ -0.82
CHD4-203ENST00000535717 FUT3P21217 361 aa9.9□□□□□ -0.82
CHD4-203ENST00000535717 RPS19P39019 145 aaKnown RBP9.9□□□□□ -0.82
CHD4-203ENST00000535717 KCNJ3P48549 501 aa9.9□□□□□ -0.82
CHD4-203ENST00000535717 EFNB2P52799 333 aa9.9□□□□□ -0.82
CHD4-203ENST00000535717 DLX1P56177 255 aa9.9□□□□□ -0.82
CHD4-203ENST00000535717 PAX5Q02548 391 aa9.9□□□□□ -0.82
CHD4-203ENST00000535717 PRB3Q04118 309 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms