RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 ZNF519Q8TB69 540 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 Q8WTZ3 238 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 HPSE2Q8WWQ2 592 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 HAS2Q92819 552 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 TSLPQ969D9 159 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 CABLES2Q9BTV7 478 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 APOOQ9BUR5 198 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 ST6GALNAC5Q9BVH7 336 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 SMIM3Q9BZL3 60 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 OR8D2Q9GZM6 311 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 LPAR5Q9H1C0 372 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 PRO1933Q9H354 126 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 PLEKHF2Q9H8W4 249 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 GPR84Q9NQS5 396 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 FSCN3Q9NQT6 498 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 MBNL1Q9NR56 388 aaKnown RBP5.7□□□□□ -1.5
USP28-202ENST00000535607 NECAP2Q9NVZ3 263 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 AK3Q9UIJ7 227 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 PADI1Q9ULC6 663 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 MMP24Q9Y5R2 645 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 SLCO1B1Q9Y6L6 691 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 LRP4O75096 1905 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 EML5Q05BV3 1969 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 TNRC6BQ9UPQ9 1833 aaKnown RBP5.69□□□□□ -1.5
USP28-202ENST00000535607 A0A0A6YYC8 382 aaPredicted RBP5.69□□□□□ -1.5
USP28-202ENST00000535607 TRAV1-1A0A0B4J248 108 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 A0A0J9YY10 115 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 SPTY2D1-AS1A0A0U1RR47 76 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 DUXBA0A1W2PPF3 345 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 ZNF705GA8MUZ8 300 aaPredicted RBP5.69□□□□□ -1.5
USP28-202ENST00000535607 NPIPA5E9PKD4 350 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 H0YGG7 62 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 H3BSH0 61 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 H7C1C5 153 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 I3L1I5 382 aaPredicted RBP5.69□□□□□ -1.5
USP28-202ENST00000535607 K7N7A8 449 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 P2RY10O00398 339 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 HSD17B6O14756 317 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 SLC31A1O15431 190 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 SRSF10O75494 262 aaKnown RBP5.69□□□□□ -1.5
USP28-202ENST00000535607 PNPP00491 289 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 IFNA5P01569 189 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 BGLAPP02818 100 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 TRGC2P03986 189 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 PGA3P0DJD8 388 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 ZNF728P0DKX0 622 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 GLRA1P23415 457 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 CD38P28907 300 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 S100GP29377 79 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 PEBP1P30086 187 aaKnown RBP5.69□□□□□ -1.5
USP28-202ENST00000535607 ALDH3B1P43353 468 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 PCP4P48539 62 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 ERVFC1-1P60608 527 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 ARF3P61204 181 aaPredicted RBP5.69□□□□□ -1.5
USP28-202ENST00000535607 LCN6P62502 163 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 UNC119Q13432 240 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 FZD2Q14332 565 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 ACKR1Q16570 336 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 TMEM95Q3KNT9 176 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 GXYLT1Q4G148 440 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 KCNIP4Q6PIL6 250 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 TMPPEQ6ZT21 453 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 SLC25A26Q70HW3 274 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 GALNTL5Q7Z4T8 443 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 GGNQ86UU5 652 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 COMMD2Q86X83 199 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 LYPD6Q86Y78 171 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 H1FOOQ8IZA3 346 aaPredicted RBP5.69□□□□□ -1.5
USP28-202ENST00000535607 MAML2Q8IZL2 1156 aaPredicted RBP5.69□□□□□ -1.5
USP28-202ENST00000535607 TMEM104Q8NE00 496 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 SLC26A10Q8NG04 563 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 OR51T1Q8NGJ9 327 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 OR5L2Q8NGL0 311 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 OR1P1Q8NH06 330 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 RNF133Q8WVZ7 376 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 RLN3Q8WXF3 142 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 TMEM234Q8WY98 164 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 CMBLQ96DG6 245 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 ADGRG7Q96K78 797 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 HIST1H2BLQ99880 126 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 SCRT1Q9BWW7 348 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 NAA60Q9H7X0 242 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 SRD5A3Q9H8P0 318 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 CRLF2Q9HC73 371 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 G6PC2Q9NQR9 355 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 PRTFDC1Q9NRG1 225 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 CENPMQ9NSP4 180 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 PILRAQ9UKJ1 303 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 NPIPA1Q9UND3 350 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 GOLT1BQ9Y3E0 138 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 PTRH2Q9Y3E5 179 aaKnown RBP5.69□□□□□ -1.5
USP28-202ENST00000535607 ATG2BQ96BY7 2078 aa5.69□□□□□ -1.5
USP28-202ENST00000535607 TGIF2-C20orf24A0A0A6YYL0 155 aa5.68□□□□□ -1.5
USP28-202ENST00000535607 A0A1W2PQD3 144 aa5.68□□□□□ -1.5
USP28-202ENST00000535607 IFITM10A6NMD0 228 aa5.68□□□□□ -1.5
USP28-202ENST00000535607 C11orf98E9PRG8 122 aa5.68□□□□□ -1.5
USP28-202ENST00000535607 GEMIN2O14893 280 aaKnown RBP5.68□□□□□ -1.5
USP28-202ENST00000535607 HCRTR2O43614 444 aa5.68□□□□□ -1.5
USP28-202ENST00000535607 UTS2O95399 124 aa5.68□□□□□ -1.5
USP28-202ENST00000535607 IGKV1D-16P01601 117 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms