RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	IRF8	Q02556	426 aa		3.09	□□□□□ -1.91
ECHDC1-223	ENST00000534442	ARL6IP1	Q15041	203 aa		3.09	□□□□□ -1.91
ECHDC1-223	ENST00000534442	NPSR1	Q6W5P4	371 aa		3.09	□□□□□ -1.91
ECHDC1-223	ENST00000534442	FAM220A	Q7Z4H9	259 aa		3.09	□□□□□ -1.91
ECHDC1-223	ENST00000534442	LINC00523	Q86TU6	105 aa		3.09	□□□□□ -1.91
ECHDC1-223	ENST00000534442	TGIF2LX	Q8IUE1	241 aa		3.09	□□□□□ -1.91
ECHDC1-223	ENST00000534442	SGPP2	Q8IWX5	399 aa		3.09	□□□□□ -1.91
ECHDC1-223	ENST00000534442	CPNE9	Q8IYJ1	553 aa		3.09	□□□□□ -1.91
ECHDC1-223	ENST00000534442	ATP6V1C2	Q8NEY4	427 aa		3.09	□□□□□ -1.91
ECHDC1-223	ENST00000534442	CLHC1	Q8NHS4	586 aa		3.09	□□□□□ -1.91
ECHDC1-223	ENST00000534442	UFD1	Q92890	307 aa		3.09	□□□□□ -1.91
ECHDC1-223	ENST00000534442	LRRC39	Q96DD0	335 aa		3.09	□□□□□ -1.91
ECHDC1-223	ENST00000534442	SEC22A	Q96IW7	307 aa		3.09	□□□□□ -1.91
ECHDC1-223	ENST00000534442	CDCA4	Q9BXL8	241 aa		3.09	□□□□□ -1.91
ECHDC1-223	ENST00000534442	NMRAL1	Q9HBL8	299 aa		3.09	□□□□□ -1.91
ECHDC1-223	ENST00000534442	MAT2B	Q9NZL9	334 aa		3.09	□□□□□ -1.91
ECHDC1-223	ENST00000534442	BFAR	Q9NZS9	450 aa		3.09	□□□□□ -1.91
ECHDC1-223	ENST00000534442	DCDC2	Q9UHG0	476 aa		3.09	□□□□□ -1.91
ECHDC1-223	ENST00000534442	COPS3	Q9UNS2	423 aa		3.09	□□□□□ -1.91
ECHDC1-223	ENST00000534442	SLC22A14	Q9Y267	594 aa		3.09	□□□□□ -1.91
ECHDC1-223	ENST00000534442	IGLV3-9	A0A075B6K5	115 aa		3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	CEACAM18	A8MTB9	384 aa		3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	GOLGA8T	H3BQL2	631 aa		3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442		H3BSH0	61 aa		3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442		H7C0C1	242 aa		3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	TGOLN2	O43493	480 aa		3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	CIB2	O75838	187 aa		3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	CST1	P01037	141 aa		3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	HSPB1	P04792	205 aa	Known RBP	3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	ALDOB	P05062	364 aa		3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	ZNF35	P13682	527 aa		3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	NTS	P30990	170 aa		3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	ATP5O	P48047	213 aa		3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	KLF3	P57682	345 aa	Predicted RBP	3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	FOXF1	Q12946	379 aa		3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	SELENBP1	Q13228	472 aa		3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	SSX2	Q16385	188 aa		3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	MOG	Q16653	247 aa		3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	TRMT5	Q32P41	509 aa	Known RBP	3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	TRMT12	Q53H54	448 aa	Known RBP	3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	C9orf129	Q5T035	196 aa	Known RBP	3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	STEAP4	Q687X5	459 aa		3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	C10orf99	Q6UWK7	81 aa		3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	ZBED8	Q8IZ13	594 aa		3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	C6orf223	Q8N319	242 aa		3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	LINC00612	Q8N6U2	182 aa		3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	OR4X2	Q8NGF9	303 aa		3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	PIGX	Q8TBF5	258 aa		3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	SLC7A13	Q8TCU3	470 aa		3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	CD200R1	Q8TD46	325 aa		3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	HAUS1	Q96CS2	278 aa		3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	RASD2	Q96D21	266 aa		3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	ZHX1-C8orf76	Q96EF9	292 aa		3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	NAP1L5	Q96NT1	182 aa	Predicted RBP	3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	CNN2	Q99439	309 aa	Known RBP	3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	MS4A8	Q9BY19	250 aa		3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	NIPAL2	Q9H841	368 aa		3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	KIF25	Q9UIL4	384 aa		3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	FBXO5	Q9UKT4	447 aa		3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	APLN	Q9ULZ1	77 aa		3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	VSIG4	Q9Y279	399 aa		3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	RPL36	Q9Y3U8	105 aa	Known RBP	3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	UGT2A1	Q9Y4X1	527 aa		3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	ASB4	Q9Y574	426 aa		3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	PEX16	Q9Y5Y5	336 aa		3.08	□□□□□ -1.92
ECHDC1-223	ENST00000534442	TANC2	Q9HCD6	1990 aa		3.07	□□□□□ -1.92
ECHDC1-223	ENST00000534442	IGKV3D-20	A0A0C4DH25	116 aa		3.07	□□□□□ -1.92
ECHDC1-223	ENST00000534442	C12orf77	C9JDV5	145 aa		3.07	□□□□□ -1.92
ECHDC1-223	ENST00000534442	GOLGA8K	D6RF30	607 aa		3.07	□□□□□ -1.92
ECHDC1-223	ENST00000534442	MANBA	O00462	879 aa		3.07	□□□□□ -1.92
ECHDC1-223	ENST00000534442	UTS2	O95399	124 aa		3.07	□□□□□ -1.92
ECHDC1-223	ENST00000534442	IGHV1-46	P01743	117 aa		3.07	□□□□□ -1.92
ECHDC1-223	ENST00000534442	OR8G3P	P0DMU2	310 aa		3.07	□□□□□ -1.92
ECHDC1-223	ENST00000534442	ZNF250	P15622	560 aa		3.07	□□□□□ -1.92
ECHDC1-223	ENST00000534442	CSNK2A2	P19784	350 aa	Predicted RBP	3.07	□□□□□ -1.92
ECHDC1-223	ENST00000534442	CDKN2B	P42772	138 aa		3.07	□□□□□ -1.92
ECHDC1-223	ENST00000534442	RAB13	P51153	203 aa		3.07	□□□□□ -1.92
ECHDC1-223	ENST00000534442	RAP1GDS1	P52306	607 aa		3.07	□□□□□ -1.92
ECHDC1-223	ENST00000534442	PSMD4	P55036	377 aa	Known RBP	3.07	□□□□□ -1.92
ECHDC1-223	ENST00000534442	TCTA	P57738	103 aa		3.07	□□□□□ -1.92
ECHDC1-223	ENST00000534442	SARNP	P82979	210 aa	Known RBP	3.07	□□□□□ -1.92
ECHDC1-223	ENST00000534442	OR5I1	Q13606	314 aa		3.07	□□□□□ -1.92
ECHDC1-223	ENST00000534442	DGUOK	Q16854	277 aa		3.07	□□□□□ -1.92
ECHDC1-223	ENST00000534442	KHDRBS2	Q5VWX1	349 aa	Known RBP	3.07	□□□□□ -1.92
ECHDC1-223	ENST00000534442	TMPPE	Q6ZT21	453 aa		3.07	□□□□□ -1.92
ECHDC1-223	ENST00000534442	LYPD6	Q86Y78	171 aa		3.07	□□□□□ -1.92
ECHDC1-223	ENST00000534442	FTMT	Q8N4E7	242 aa		3.07	□□□□□ -1.92
ECHDC1-223	ENST00000534442	OR52I1	Q8NGK6	324 aa		3.07	□□□□□ -1.92
ECHDC1-223	ENST00000534442	SYNPR	Q8TBG9	265 aa		3.07	□□□□□ -1.92
ECHDC1-223	ENST00000534442	EEF1AKMT1	Q8WVE0	214 aa		3.07	□□□□□ -1.92
ECHDC1-223	ENST00000534442	WDR34	Q96EX3	536 aa		3.07	□□□□□ -1.92
ECHDC1-223	ENST00000534442	CMTM7	Q96FZ5	175 aa		3.07	□□□□□ -1.92
ECHDC1-223	ENST00000534442	TSPAN32	Q96QS1	320 aa		3.07	□□□□□ -1.92
ECHDC1-223	ENST00000534442	CENPK	Q9BS16	269 aa		3.07	□□□□□ -1.92
ECHDC1-223	ENST00000534442	SIRT7	Q9NRC8	400 aa		3.07	□□□□□ -1.92
ECHDC1-223	ENST00000534442	CHRAC1	Q9NRG0	131 aa		3.07	□□□□□ -1.92
ECHDC1-223	ENST00000534442	TMEM106B	Q9NUM4	274 aa		3.07	□□□□□ -1.92
ECHDC1-223	ENST00000534442	CLN8	Q9UBY8	286 aa		3.07	□□□□□ -1.92
ECHDC1-223	ENST00000534442	KCNIP3	Q9Y2W7	256 aa		3.07	□□□□□ -1.92

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