RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-223ENST00000533979 C2orf73Q8N5S3 287 aaPredicted RBP3.41□□□□□ -1.86
ATM-223ENST00000533979 TMEM251Q8N6I4 163 aa3.41□□□□□ -1.86
ATM-223ENST00000533979 OR10AD1Q8NGE0 317 aa3.41□□□□□ -1.86
ATM-223ENST00000533979 DYNC2LI1Q8TCX1 351 aa3.41□□□□□ -1.86
ATM-223ENST00000533979 ZFP90Q8TF47 636 aa3.41□□□□□ -1.86
ATM-223ENST00000533979 GEMIN6Q8WXD5 167 aaKnown RBP3.41□□□□□ -1.86
ATM-223ENST00000533979 CMTM5Q96DZ9 223 aa3.41□□□□□ -1.86
ATM-223ENST00000533979 YIPF6Q96EC8 236 aa3.41□□□□□ -1.86
ATM-223ENST00000533979 BTN2A3PQ96KV6 586 aa3.41□□□□□ -1.86
ATM-223ENST00000533979 RILPQ96NA2 401 aa3.41□□□□□ -1.86
ATM-223ENST00000533979 PSMB7Q99436 277 aa3.41□□□□□ -1.86
ATM-223ENST00000533979 ZNF2Q9BSG1 426 aaPredicted RBP3.41□□□□□ -1.86
ATM-223ENST00000533979 TIPINQ9BVW5 301 aa3.41□□□□□ -1.86
ATM-223ENST00000533979 GABARAPL3Q9BY60 117 aa3.41□□□□□ -1.86
ATM-223ENST00000533979 POLR2J2Q9GZM3 115 aaKnown RBP3.41□□□□□ -1.86
ATM-223ENST00000533979 POLR2J3Q9H1A7 115 aaKnown RBP3.41□□□□□ -1.86
ATM-223ENST00000533979 ARV1Q9H2C2 271 aa3.41□□□□□ -1.86
ATM-223ENST00000533979 ZNF442Q9H7R0 627 aa3.41□□□□□ -1.86
ATM-223ENST00000533979 GNB4Q9HAV0 340 aa3.41□□□□□ -1.86
ATM-223ENST00000533979 ABCB9Q9NP78 766 aa3.41□□□□□ -1.86
ATM-223ENST00000533979 OPN4Q9UHM6 478 aa3.41□□□□□ -1.86
ATM-223ENST00000533979 TFR2Q9UP52 801 aa3.41□□□□□ -1.86
ATM-223ENST00000533979 ARL2BPQ9Y2Y0 163 aa3.41□□□□□ -1.86
ATM-223ENST00000533979 POLR3HQ9Y535 204 aaPredicted RBP3.41□□□□□ -1.86
ATM-223ENST00000533979 MRPS18BQ9Y676 258 aaKnown RBP3.41□□□□□ -1.86
ATM-223ENST00000533979 SLC22A7Q9Y694 548 aa3.41□□□□□ -1.86
ATM-223ENST00000533979 USH1CQ9Y6N9 552 aa3.41□□□□□ -1.86
ATM-223ENST00000533979 GON4LQ3T8J9 2241 aa3.41□□□□□ -1.86
ATM-223ENST00000533979 TECTAO75443 2155 aa3.41□□□□□ -1.86
ATM-223ENST00000533979 ZNFX1Q9P2E3 1918 aaKnown RBP3.4□□□□□ -1.86
ATM-223ENST00000533979 CACNA1HO95180 2353 aa3.4□□□□□ -1.86
ATM-223ENST00000533979 FAM240AA0A1B0GVK7 77 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 LINC00587B1AMM8 73 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 H7C417 338 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 TCAPO15273 167 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 SLC31A1O15431 190 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 CNMDO75829 334 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 IFNA5P01569 189 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 IGHV3-23P01764 117 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 CRHP06850 196 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 ZDHHC11BP0C7U3 371 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 LIMS3P0CW19 117 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 LIMS4P0CW20 117 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 IGHV3-43DP0DP04 118 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 F8A1P23610 371 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 MYCNOSP40205 109 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 TAS2R31P59538 309 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 GNG2P59768 71 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 CCL7P80098 99 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 CKAP4Q07065 602 aaKnown RBP3.4□□□□□ -1.87
ATM-223ENST00000533979 TCEAL5Q5H9L2 206 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 CROCCQ5TZA2 2017 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 HBMQ6B0K9 141 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 RALGAPA1Q6GYQ0 2036 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 ZFP1Q6P2D0 407 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 TEX43Q6ZNM6 134 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 FAM92BQ6ZTR7 304 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 HSD17B13Q7Z5P4 300 aaPredicted RBP3.4□□□□□ -1.87
ATM-223ENST00000533979 DEFB128Q7Z7B8 93 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 UBALD2Q8IYN6 164 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 TMEM61Q8N0U2 210 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 RIBC1Q8N443 379 aaPredicted RBP3.4□□□□□ -1.87
ATM-223ENST00000533979 CCDC54Q8NEL0 328 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 OR8G5Q8NG78 346 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 OR5L1Q8NGL2 311 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 OR2G3Q8NGZ4 309 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 OR2AE1Q8NHA4 323 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 ZFAND1Q8TCF1 268 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 LRRC29Q8WV35 223 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 RNF185Q96GF1 192 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 ZIM3Q96PE6 472 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 QKIQ96PU8 341 aaKnown RBP eCLIP3.4□□□□□ -1.87
ATM-223ENST00000533979 SMIM14Q96QK8 99 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 VAT1Q99536 393 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 NIPSNAP1Q9BPW8 284 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 ULBP1Q9BZM6 244 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 NXF2Q9GZY0 626 aaKnown RBP3.4□□□□□ -1.87
ATM-223ENST00000533979 PCBD2Q9H0N5 130 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 DSN1Q9H410 356 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 SLC25A22Q9H936 323 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 RDH14Q9HBH5 336 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 HRASLSQ9HDD0 168 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 SH2D2AQ9NP31 389 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 CCL28Q9NRJ3 127 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 RGS18Q9NS28 235 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 DDIT4Q9NX09 232 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 IL17CQ9P0M4 197 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 ZNF581Q9P0T4 197 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 MTFP1Q9UDX5 166 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 TP53TG3Q9ULZ0 132 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 ZNF337Q9Y3M9 751 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 MYO18BQ8IUG5 2567 aa3.4□□□□□ -1.87
ATM-223ENST00000533979 NID2Q14112 1375 aa3.39□□□□□ -1.87
ATM-223ENST00000533979 PLIN4Q96Q06 1357 aa3.39□□□□□ -1.87
ATM-223ENST00000533979 HELZ2Q9BYK8 2649 aaKnown RBP3.39□□□□□ -1.87
ATM-223ENST00000533979 IGHV3OR16-9A0A0B4J2B5 98 aa3.39□□□□□ -1.87
ATM-223ENST00000533979 A0A1B0GV72 72 aa3.39□□□□□ -1.87
ATM-223ENST00000533979 RFPL4AA6NLU0 287 aa3.39□□□□□ -1.87
ATM-223ENST00000533979 A8MU10 97 aa3.39□□□□□ -1.87
ATM-223ENST00000533979 C9J4A7 227 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms