RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 PPP1CBP62140 327 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 ACTG1P63261 375 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 RBPJQ06330 500 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 PRDX4Q13162 271 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 CEACAM21Q3KPI0 293 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 ZNF260Q3ZCT1 412 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 TIMM23BQ5SRD1 257 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 PLCXD3Q63HM9 321 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 PLET1Q6UQ28 207 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 C3P1Q6ZMU1 363 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 NCCRP1Q6ZVX7 275 aaPredicted RBP4.84□□□□□ -1.63
CHKA-208ENST00000533910 C1QL2Q7Z5L3 287 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 C1orf174Q8IYL3 243 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 ZDHHC23Q8IYP9 409 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 FAM185AQ8N0U4 392 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 CADM3Q8N126 398 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 ZSCAN4Q8NAM6 433 aaPredicted RBP4.84□□□□□ -1.63
CHKA-208ENST00000533910 ACBD4Q8NC06 268 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 BEND2Q8NDZ0 799 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 OR56B1Q8NGI3 324 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 OR5D18Q8NGL1 313 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 OR10R2Q8NGX6 335 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 CREB3L1Q96BA8 519 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 PHF21AQ96BD5 680 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 UPRTQ96BW1 309 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 PPP1R14BQ96C90 147 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 SEH1LQ96EE3 360 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 BORCS8Q96FH0 119 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 PERPQ96FX8 193 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 C5orf30Q96GV9 206 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 NICN1Q9BSH3 213 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 PIMREGQ9BSJ6 248 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 MARVELD1Q9BSK0 173 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 URM1Q9BTM9 101 aaKnown RBP4.84□□□□□ -1.63
CHKA-208ENST00000533910 PAPOLGQ9BWT3 736 aaKnown RBP4.84□□□□□ -1.63
CHKA-208ENST00000533910 TUBG2Q9NRH3 451 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 BEX4Q9NWD9 120 aaPredicted RBP4.84□□□□□ -1.63
CHKA-208ENST00000533910 TAS2R8Q9NYW2 309 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 COPZ2Q9P299 210 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 ZNF629Q9UEG4 869 aaPredicted RBP4.84□□□□□ -1.63
CHKA-208ENST00000533910 TINAGQ9UJW2 476 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 ANAPC10Q9UM13 185 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 SLC7A11Q9UPY5 501 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 MPC1Q9Y5U8 109 aa4.84□□□□□ -1.63
CHKA-208ENST00000533910 ATRXP46100 2492 aa4.84□□□□□ -1.64
CHKA-208ENST00000533910 POLEQ07864 2286 aa4.84□□□□□ -1.64
CHKA-208ENST00000533910 PRR14LQ5THK1 2151 aa4.84□□□□□ -1.64
CHKA-208ENST00000533910 ESPL1Q14674 2120 aa4.84□□□□□ -1.64
CHKA-208ENST00000533910 IGHV2OR16-5A0A0B4J2B6 119 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 IGKV1-12A0A0C4DH73 117 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 FAM240BA0A1B0GVZ2 78 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 TMEM235A6NFC5 223 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 OR5B21A6NL26 309 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 ZNF850A8MQ14 1090 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 CENPXA8MT69 81 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 IQCF6A8MYZ5 107 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 IFNL4K9M1U5 179 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 MGST3O14880 152 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 AKR7A2O43488 359 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 ZNF780AO75290 641 aaPredicted RBP4.83□□□□□ -1.64
CHKA-208ENST00000533910 CA11O75493 328 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 IGKV1D-12P01611 117 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 MT-ND4P03905 459 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 CD74P04233 296 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 CRYGCP07315 174 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 NPSP0C0P6 89 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 GSTT2BP0CG30 244 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 TRAPPC2P0DI81 140 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 TRAPPC2BP0DI82 140 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 AREGP15514 252 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 HIST1H1DP16402 221 aaKnown RBP4.83□□□□□ -1.64
CHKA-208ENST00000533910 SELEP16581 610 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 AGAP20933 346 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 IL32P24001 234 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 DUSP1P28562 367 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 CD1BP29016 333 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 VEGFCP49767 419 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 ATP1B3P54709 279 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 UCP2P55851 309 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 BTG1P62324 171 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 PDZK1IP1Q13113 114 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 PNLIPRP3Q17RR3 467 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 SLC22A6Q4U2R8 563 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 DMRTC1Q5HYR2 192 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 TMEM255AQ5JRV8 349 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 NHLRC3Q5JS37 347 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 AGAP6Q5VW22 663 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 UNQ6126/PRO20091Q6UXV3 157 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 Q6ZTK2 550 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 MOB3CQ70IA8 216 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 FJX1Q86VR8 437 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 ZNF573Q86YE8 665 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 SAXO1Q8IYX7 474 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 NHLRC2Q8NBF2 726 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 RELL2Q8NC24 303 aaPredicted RBP4.83□□□□□ -1.64
CHKA-208ENST00000533910 ST6GALNAC3Q8NDV1 305 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 C2CD4CQ8TF44 421 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 OR5P3Q8WZ94 311 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 PIGCQ92535 297 aa4.83□□□□□ -1.64
CHKA-208ENST00000533910 S100PBPQ96BU1 408 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms