RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 EXTL1Q92935 676 aa4.72□□□□□ -1.65
CKAP5-212ENST00000533413 NTNG2Q96CW9 530 aa4.72□□□□□ -1.65
CKAP5-212ENST00000533413 C4orf45Q96LM5 186 aa4.72□□□□□ -1.65
CKAP5-212ENST00000533413 GPX7Q96SL4 187 aaPredicted RBP4.72□□□□□ -1.65
CKAP5-212ENST00000533413 WDR13Q9H1Z4 485 aa4.72□□□□□ -1.65
CKAP5-212ENST00000533413 GAR1Q9NY12 217 aaKnown RBP4.72□□□□□ -1.65
CKAP5-212ENST00000533413 FAM96BQ9Y3D0 163 aa4.72□□□□□ -1.65
CKAP5-212ENST00000533413 TMED3Q9Y3Q3 217 aa4.72□□□□□ -1.65
CKAP5-212ENST00000533413 LY6G6EA0A0G2JKS1 128 aa4.72□□□□□ -1.65
CKAP5-212ENST00000533413 TRBV11-1A0A0K0K1C0 115 aa4.72□□□□□ -1.65
CKAP5-212ENST00000533413 A0A1B0GTI1 187 aa4.72□□□□□ -1.65
CKAP5-212ENST00000533413 SEC14L6B5MCN3 397 aa4.72□□□□□ -1.65
CKAP5-212ENST00000533413 CDC14BO60729 498 aa4.72□□□□□ -1.65
CKAP5-212ENST00000533413 IL18BPO95998 194 aa4.72□□□□□ -1.65
CKAP5-212ENST00000533413 IGKV1D-16P01601 117 aa4.72□□□□□ -1.65
CKAP5-212ENST00000533413 NTF4P34130 210 aa4.72□□□□□ -1.65
CKAP5-212ENST00000533413 AKR1C3P42330 323 aa4.72□□□□□ -1.65
CKAP5-212ENST00000533413 RPS27P42677 84 aaKnown RBP4.72□□□□□ -1.65
CKAP5-212ENST00000533413 NPBWR2P48146 333 aa4.72□□□□□ -1.65
CKAP5-212ENST00000533413 RPL19P84098 196 aaKnown RBP4.72□□□□□ -1.65
CKAP5-212ENST00000533413 SRSF3P84103 164 aaKnown RBP4.72□□□□□ -1.65
CKAP5-212ENST00000533413 PSG6Q00889 435 aa4.72□□□□□ -1.65
CKAP5-212ENST00000533413 RAB35Q15286 201 aa4.72□□□□□ -1.65
CKAP5-212ENST00000533413 HAGHQ16775 308 aa4.72□□□□□ -1.65
CKAP5-212ENST00000533413 DEFB133Q30KQ1 61 aa4.72□□□□□ -1.65
CKAP5-212ENST00000533413 WDR38Q5JTN6 314 aa4.72□□□□□ -1.65
CKAP5-212ENST00000533413 NKAPLQ5M9Q1 402 aa4.72□□□□□ -1.65
CKAP5-212ENST00000533413 GLYATL3Q5SZD4 288 aa4.72□□□□□ -1.65
CKAP5-212ENST00000533413 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.72□□□□□ -1.65
CKAP5-212ENST00000533413 SLC18B1Q6NT16 456 aa4.72□□□□□ -1.65
CKAP5-212ENST00000533413 CA13Q8N1Q1 262 aa4.72□□□□□ -1.65
CKAP5-212ENST00000533413 GATSQ8NAP1 163 aa4.72□□□□□ -1.65
CKAP5-212ENST00000533413 ZNF563Q8TA94 476 aa4.72□□□□□ -1.65
CKAP5-212ENST00000533413 DCUN1D4Q92564 292 aa4.72□□□□□ -1.65
CKAP5-212ENST00000533413 APH1AQ96BI3 265 aa4.72□□□□□ -1.65
CKAP5-212ENST00000533413 CUTCQ9NTM9 273 aa4.72□□□□□ -1.65
CKAP5-212ENST00000533413 CACFD1Q9UGQ2 172 aa4.72□□□□□ -1.65
CKAP5-212ENST00000533413 U3KQA8 63 aa4.72□□□□□ -1.65
CKAP5-212ENST00000533413 SCN3AQ9NY46 2000 aa4.72□□□□□ -1.65
CKAP5-212ENST00000533413 MDC1Q14676 2089 aaKnown RBP4.72□□□□□ -1.65
CKAP5-212ENST00000533413 ZFHX2Q9C0A1 2572 aaPredicted RBP4.72□□□□□ -1.65
CKAP5-212ENST00000533413 DMDP11532 3685 aa4.72□□□□□ -1.65
CKAP5-212ENST00000533413 WDFY4Q6ZS81 3184 aa4.72□□□□□ -1.65
CKAP5-212ENST00000533413 ZNF705EA8MWA4 302 aaPredicted RBP4.71□□□□□ -1.65
CKAP5-212ENST00000533413 TP53I11O14683 189 aa4.71□□□□□ -1.65
CKAP5-212ENST00000533413 IFI6P09912 130 aa4.71□□□□□ -1.65
CKAP5-212ENST00000533413 CXCR1P25024 350 aa4.71□□□□□ -1.65
CKAP5-212ENST00000533413 ARR3P36575 388 aa4.71□□□□□ -1.65
CKAP5-212ENST00000533413 RAB38P57729 211 aa4.71□□□□□ -1.65
CKAP5-212ENST00000533413 RAP1BP61224 184 aa4.71□□□□□ -1.65
CKAP5-212ENST00000533413 CYCSP99999 105 aaKnown RBP4.71□□□□□ -1.65
CKAP5-212ENST00000533413 FAM53BQ14153 422 aa4.71□□□□□ -1.65
CKAP5-212ENST00000533413 ZNF74Q16587 644 aa4.71□□□□□ -1.65
CKAP5-212ENST00000533413 KCTD18Q6PI47 426 aaPredicted RBP4.71□□□□□ -1.65
CKAP5-212ENST00000533413 ADGRE4PQ86SQ3 457 aa4.71□□□□□ -1.65
CKAP5-212ENST00000533413 OOSP2Q86WS3 158 aa4.71□□□□□ -1.65
CKAP5-212ENST00000533413 BAP18Q8IXM2 172 aa4.71□□□□□ -1.65
CKAP5-212ENST00000533413 OR4K17Q8NGC6 315 aa4.71□□□□□ -1.65
CKAP5-212ENST00000533413 ASB17Q8WXJ9 295 aa4.71□□□□□ -1.65
CKAP5-212ENST00000533413 TMEM234Q8WY98 164 aa4.71□□□□□ -1.65
CKAP5-212ENST00000533413 RNF166Q96A37 237 aaPredicted RBP4.71□□□□□ -1.65
CKAP5-212ENST00000533413 ANKRD9Q96BM1 317 aaPredicted RBP4.71□□□□□ -1.65
CKAP5-212ENST00000533413 CTHRC1Q96CG8 243 aa4.71□□□□□ -1.65
CKAP5-212ENST00000533413 CLCC1Q96S66 551 aa4.71□□□□□ -1.65
CKAP5-212ENST00000533413 ATG101Q9BSB4 218 aa4.71□□□□□ -1.65
CKAP5-212ENST00000533413 SNHG12Q9BXW3 62 aa4.71□□□□□ -1.65
CKAP5-212ENST00000533413 SYT4Q9H2B2 425 aa4.71□□□□□ -1.65
CKAP5-212ENST00000533413 TCEAL2Q9H3H9 227 aaPredicted RBP4.71□□□□□ -1.65
CKAP5-212ENST00000533413 ZNF107Q9UII5 783 aaPredicted RBP4.71□□□□□ -1.65
CKAP5-212ENST00000533413 PIEZO1Q92508 2521 aa4.71□□□□□ -1.65
CKAP5-212ENST00000533413 FAM186AA6NE01 2351 aa4.71□□□□□ -1.66
CKAP5-212ENST00000533413 TGIF2-C20orf24A0A0A6YYL0 155 aa4.71□□□□□ -1.66
CKAP5-212ENST00000533413 SPAARA0A1B0GVQ0 90 aa4.71□□□□□ -1.66
CKAP5-212ENST00000533413 PPIAL4DF5H284 164 aa4.71□□□□□ -1.66
CKAP5-212ENST00000533413 SULT2B1O00204 365 aa4.71□□□□□ -1.66
CKAP5-212ENST00000533413 DCTN6O00399 190 aa4.71□□□□□ -1.66
CKAP5-212ENST00000533413 MFNGO00587 321 aa4.71□□□□□ -1.66
CKAP5-212ENST00000533413 NTN3O00634 580 aaPredicted RBP4.71□□□□□ -1.66
CKAP5-212ENST00000533413 ALOX12BO75342 701 aa4.71□□□□□ -1.66
CKAP5-212ENST00000533413 TOX4O94842 621 aa4.71□□□□□ -1.66
CKAP5-212ENST00000533413 PVRP15151 417 aa4.71□□□□□ -1.66
CKAP5-212ENST00000533413 AKR1C4P17516 323 aa4.71□□□□□ -1.66
CKAP5-212ENST00000533413 GLP1RP43220 463 aa4.71□□□□□ -1.66
CKAP5-212ENST00000533413 RPS4XP62701 263 aaKnown RBP4.71□□□□□ -1.66
CKAP5-212ENST00000533413 SSBP2P81877 361 aaPredicted RBP4.71□□□□□ -1.66
CKAP5-212ENST00000533413 ZNF542PQ5EBM4 170 aa4.71□□□□□ -1.66
CKAP5-212ENST00000533413 SPIN3Q5JUX0 258 aa4.71□□□□□ -1.66
CKAP5-212ENST00000533413 TMEM225Q6GV28 225 aa4.71□□□□□ -1.66
CKAP5-212ENST00000533413 EIF5AL1Q6IS14 154 aaKnown RBP4.71□□□□□ -1.66
CKAP5-212ENST00000533413 SLC25A42Q86VD7 318 aa4.71□□□□□ -1.66
CKAP5-212ENST00000533413 HIST3H2BBQ8N257 126 aa4.71□□□□□ -1.66
CKAP5-212ENST00000533413 SMIM20Q8N5G0 67 aa4.71□□□□□ -1.66
CKAP5-212ENST00000533413 TMEM217Q8N7C4 229 aa4.71□□□□□ -1.66
CKAP5-212ENST00000533413 C11orf44Q8N8P7 122 aa4.71□□□□□ -1.66
CKAP5-212ENST00000533413 OR10S1Q8NGN2 331 aa4.71□□□□□ -1.66
CKAP5-212ENST00000533413 OR13C8Q8NGS7 320 aa4.71□□□□□ -1.66
CKAP5-212ENST00000533413 OR4C3Q8NH37 302 aa4.71□□□□□ -1.66
CKAP5-212ENST00000533413 OR52E5Q8NH55 327 aa4.71□□□□□ -1.66
CKAP5-212ENST00000533413 PTH2Q96A98 100 aa4.71□□□□□ -1.66
CKAP5-212ENST00000533413 GALNT14Q96FL9 552 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms