RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 ERGIC3Q9Y282 383 aa24.47■■□□□ 1.51
SSSCA1-207ENST00000533115 TRBV5-7A0A0A0MS05 114 aa24.46■■□□□ 1.51
SSSCA1-207ENST00000533115 CD1AP06126 327 aa24.46■■□□□ 1.51
SSSCA1-207ENST00000533115 CELP19835 753 aa24.46■■□□□ 1.51
SSSCA1-207ENST00000533115 FSTP19883 344 aa24.46■■□□□ 1.51
SSSCA1-207ENST00000533115 GABRA5P31644 462 aa24.46■■□□□ 1.51
SSSCA1-207ENST00000533115 BAIAP2L2Q6UXY1 529 aa24.46■■□□□ 1.51
SSSCA1-207ENST00000533115 ABHD12Q8N2K0 398 aa24.46■■□□□ 1.51
SSSCA1-207ENST00000533115 NDNFQ8TB73 568 aa24.46■■□□□ 1.51
SSSCA1-207ENST00000533115 TRAV8-7A0A075B6U6 113 aa24.45■■□□□ 1.5
SSSCA1-207ENST00000533115 CHST1O43916 411 aa24.45■■□□□ 1.5
SSSCA1-207ENST00000533115 CSTBP04080 98 aaKnown RBP24.45■■□□□ 1.5
SSSCA1-207ENST00000533115 AQP4P55087 323 aa24.45■■□□□ 1.5
SSSCA1-207ENST00000533115 GABPB1Q06547 395 aaPredicted RBP24.45■■□□□ 1.5
SSSCA1-207ENST00000533115 DOC2BQ14184 412 aa24.45■■□□□ 1.5
SSSCA1-207ENST00000533115 NHLRC3Q5JS37 347 aa24.45■■□□□ 1.5
SSSCA1-207ENST00000533115 C6orf141Q5SZD1 244 aa24.45■■□□□ 1.5
SSSCA1-207ENST00000533115 RTN4RL2Q86UN3 420 aa24.45■■□□□ 1.5
SSSCA1-207ENST00000533115 OSR2Q8N2R0 312 aa24.45■■□□□ 1.5
SSSCA1-207ENST00000533115 OR4P4Q8NGL7 312 aa24.45■■□□□ 1.5
SSSCA1-207ENST00000533115 OR4C13Q8NGP0 309 aa24.45■■□□□ 1.5
SSSCA1-207ENST00000533115 PAK1IP1Q9NWT1 392 aaPredicted RBP24.45■■□□□ 1.5
SSSCA1-207ENST00000533115 TCF19Q9Y242 345 aa24.45■■□□□ 1.5
SSSCA1-207ENST00000533115 ST3GAL6Q9Y274 331 aa24.45■■□□□ 1.5
SSSCA1-207ENST00000533115 HILPDAQ9Y5L2 63 aa24.45■■□□□ 1.5
SSSCA1-207ENST00000533115 A0A1W2PPK0 400 aa24.44■■□□□ 1.5
SSSCA1-207ENST00000533115 MAGEA13PA6NCF6 341 aa24.44■■□□□ 1.5
SSSCA1-207ENST00000533115 ZNF729A6NN14 1252 aaPredicted RBP24.44■■□□□ 1.5
SSSCA1-207ENST00000533115 CDK1P06493 297 aa24.44■■□□□ 1.5
SSSCA1-207ENST00000533115 GDNFP39905 211 aa24.44■■□□□ 1.5
SSSCA1-207ENST00000533115 KIR2DS4P43632 304 aa24.44■■□□□ 1.5
SSSCA1-207ENST00000533115 DYNLT3P51808 116 aa24.44■■□□□ 1.5
SSSCA1-207ENST00000533115 RNLSQ5VYX0 342 aa24.44■■□□□ 1.5
SSSCA1-207ENST00000533115 OR4D6Q8NGJ1 314 aa24.44■■□□□ 1.5
SSSCA1-207ENST00000533115 CDCA4Q9BXL8 241 aa24.44■■□□□ 1.5
SSSCA1-207ENST00000533115 BARHL1Q9BZE3 327 aa24.44■■□□□ 1.5
SSSCA1-207ENST00000533115 NCOR1P1Q9H4R4 102 aa24.44■■□□□ 1.5
SSSCA1-207ENST00000533115 RANBP3Q9H6Z4 567 aaPredicted RBP24.44■■□□□ 1.5
SSSCA1-207ENST00000533115 HTR1DP28221 377 aa24.43■■□□□ 1.5
SSSCA1-207ENST00000533115 KCNJ3P48549 501 aa24.43■■□□□ 1.5
SSSCA1-207ENST00000533115 RBM11P57052 281 aaKnown RBP24.43■■□□□ 1.5
SSSCA1-207ENST00000533115 C17orf58Q2M2W7 97 aa24.43■■□□□ 1.5
SSSCA1-207ENST00000533115 TREML4Q6UXN2 200 aa24.43■■□□□ 1.5
SSSCA1-207ENST00000533115 DERL3Q96Q80 235 aa24.43■■□□□ 1.5
SSSCA1-207ENST00000533115 IFT22Q9H7X7 185 aa24.43■■□□□ 1.5
SSSCA1-207ENST00000533115 PCDHB16Q9NRJ7 776 aa24.43■■□□□ 1.5
SSSCA1-207ENST00000533115 KIF25Q9UIL4 384 aa24.43■■□□□ 1.5
SSSCA1-207ENST00000533115 FOXJ3Q9UPW0 622 aa24.43■■□□□ 1.5
SSSCA1-207ENST00000533115 MEIKINA0A087WXM9 373 aa24.42■■□□□ 1.5
SSSCA1-207ENST00000533115 MEGF11A6BM72 1044 aa24.42■■□□□ 1.5
SSSCA1-207ENST00000533115 PTGES3LE9PB15 166 aa24.42■■□□□ 1.5
SSSCA1-207ENST00000533115 ZNF780AO75290 641 aaPredicted RBP24.42■■□□□ 1.5
SSSCA1-207ENST00000533115 SERPINA2P20848 420 aa24.42■■□□□ 1.5
SSSCA1-207ENST00000533115 CD34P28906 385 aa24.42■■□□□ 1.5
SSSCA1-207ENST00000533115 BDH1Q02338 343 aa24.42■■□□□ 1.5
SSSCA1-207ENST00000533115 PAX5Q02548 391 aa24.42■■□□□ 1.5
SSSCA1-207ENST00000533115 CCBE1Q6UXH8 406 aaPredicted RBP24.42■■□□□ 1.5
SSSCA1-207ENST00000533115 ZNF565Q8N9K5 539 aa24.42■■□□□ 1.5
SSSCA1-207ENST00000533115 ZNF596Q8TC21 504 aa24.42■■□□□ 1.5
SSSCA1-207ENST00000533115 NPFFR1Q9GZQ6 430 aa24.42■■□□□ 1.5
SSSCA1-207ENST00000533115 TCF7L1Q9HCS4 588 aa24.42■■□□□ 1.5
SSSCA1-207ENST00000533115 PITPNC1Q9UKF7 332 aa24.42■■□□□ 1.5
SSSCA1-207ENST00000533115 SIGLEC9Q9Y336 463 aa24.42■■□□□ 1.5
SSSCA1-207ENST00000533115 KBTBD11-OT1A0A1B0GTJ5 212 aa24.41■■□□□ 1.5
SSSCA1-207ENST00000533115 FAM172BPA6NC97 362 aa24.41■■□□□ 1.5
SSSCA1-207ENST00000533115 A6NDX4 124 aa24.41■■□□□ 1.5
SSSCA1-207ENST00000533115 TIMM23O14925 209 aa24.41■■□□□ 1.5
SSSCA1-207ENST00000533115 CGB3P0DN86 165 aa24.41■■□□□ 1.5
SSSCA1-207ENST00000533115 CGB7P0DN87 165 aa24.41■■□□□ 1.5
SSSCA1-207ENST00000533115 JUNBP17275 347 aaPredicted RBP24.41■■□□□ 1.5
SSSCA1-207ENST00000533115 GLP1RP43220 463 aa24.41■■□□□ 1.5
SSSCA1-207ENST00000533115 RSBN1Q5VWQ0 802 aaPredicted RBP24.41■■□□□ 1.5
SSSCA1-207ENST00000533115 LINC00596Q86U02 117 aa24.41■■□□□ 1.5
SSSCA1-207ENST00000533115 SUMF2Q8NBJ7 301 aa24.41■■□□□ 1.5
SSSCA1-207ENST00000533115 OR13A1Q8NGR1 328 aa24.41■■□□□ 1.5
SSSCA1-207ENST00000533115 PLPPR1Q8TBJ4 325 aa24.41■■□□□ 1.5
SSSCA1-207ENST00000533115 MYDGFQ969H8 173 aa24.41■■□□□ 1.5
SSSCA1-207ENST00000533115 DPCDQ9BVM2 203 aaPredicted RBP24.41■■□□□ 1.5
SSSCA1-207ENST00000533115 MND1Q9BWT6 205 aa24.41■■□□□ 1.5
SSSCA1-207ENST00000533115 ZNF286AQ9HBT8 521 aa24.41■■□□□ 1.5
SSSCA1-207ENST00000533115 SCN3BQ9NY72 215 aa24.41■■□□□ 1.5
SSSCA1-207ENST00000533115 ZNF581Q9P0T4 197 aa24.41■■□□□ 1.5
SSSCA1-207ENST00000533115 DPM3Q9P2X0 92 aa24.41■■□□□ 1.5
SSSCA1-207ENST00000533115 OR7C1O76099 320 aaPredicted RBP24.4■■□□□ 1.5
SSSCA1-207ENST00000533115 IGLV1-47P01700 117 aa24.4■■□□□ 1.5
SSSCA1-207ENST00000533115 SLC22A6Q4U2R8 563 aa24.4■■□□□ 1.5
SSSCA1-207ENST00000533115 JAGN1Q8N5M9 183 aa24.4■■□□□ 1.5
SSSCA1-207ENST00000533115 A0A087X0M5 115 aa24.39■■□□□ 1.49
SSSCA1-207ENST00000533115 A0A1B0GX30 115 aa24.39■■□□□ 1.49
SSSCA1-207ENST00000533115 M0QZ24 198 aa24.39■■□□□ 1.49
SSSCA1-207ENST00000533115 F2RL2O00254 374 aa24.39■■□□□ 1.49
SSSCA1-207ENST00000533115 GEMIN2O14893 280 aaKnown RBP24.39■■□□□ 1.49
SSSCA1-207ENST00000533115 PIN1P1O15428 100 aa24.39■■□□□ 1.49
SSSCA1-207ENST00000533115 MAS1P04201 325 aa24.39■■□□□ 1.49
SSSCA1-207ENST00000533115 GTF2F2P13984 249 aa24.39■■□□□ 1.49
SSSCA1-207ENST00000533115 EFNB2P52799 333 aa24.39■■□□□ 1.49
SSSCA1-207ENST00000533115 GPR176Q14439 515 aa24.39■■□□□ 1.49
SSSCA1-207ENST00000533115 TMEM219Q86XT9 240 aa24.39■■□□□ 1.49
SSSCA1-207ENST00000533115 CDH26Q8IXH8 852 aa24.39■■□□□ 1.49
SSSCA1-207ENST00000533115 DTX3Q8N9I9 347 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms