RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 SHARPINQ9H0F6 387 aa11.89□□□□□ -0.51
COL16A1-217ENST00000532877 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.89□□□□□ -0.51
COL16A1-217ENST00000532877 MIOXQ9UGB7 285 aa11.89□□□□□ -0.51
COL16A1-217ENST00000532877 ELF5Q9UKW6 265 aaPredicted RBP11.89□□□□□ -0.51
COL16A1-217ENST00000532877 V9GYH0 126 aa11.89□□□□□ -0.51
COL16A1-217ENST00000532877 FBN1P35555 2871 aaKnown RBP11.89□□□□□ -0.51
COL16A1-217ENST00000532877 IGHV4-61A0A0C4DH41 118 aa11.88□□□□□ -0.51
COL16A1-217ENST00000532877 A0A0G2JMP0 313 aa11.88□□□□□ -0.51
COL16A1-217ENST00000532877 A0A0X1KG70 313 aa11.88□□□□□ -0.51
COL16A1-217ENST00000532877 UBE2QL1A1L167 161 aa11.88□□□□□ -0.51
COL16A1-217ENST00000532877 TMEM235A6NFC5 223 aa11.88□□□□□ -0.51
COL16A1-217ENST00000532877 SERPINE3A8MV23 424 aa11.88□□□□□ -0.51
COL16A1-217ENST00000532877 MCRIP1C9JLW8 97 aa11.88□□□□□ -0.51
COL16A1-217ENST00000532877 IGHV2-5P01817 119 aa11.88□□□□□ -0.51
COL16A1-217ENST00000532877 TK1P04183 234 aa11.88□□□□□ -0.51
COL16A1-217ENST00000532877 CSN2P05814 226 aa11.88□□□□□ -0.51
COL16A1-217ENST00000532877 GSTP1P09211 210 aaKnown RBP11.88□□□□□ -0.51
COL16A1-217ENST00000532877 PTHLHP12272 177 aa11.88□□□□□ -0.51
COL16A1-217ENST00000532877 SLC25A16P16260 332 aa11.88□□□□□ -0.51
COL16A1-217ENST00000532877 IL18Q14116 193 aa11.88□□□□□ -0.51
COL16A1-217ENST00000532877 RBM39Q14498 530 aaKnown RBP11.88□□□□□ -0.51
COL16A1-217ENST00000532877 ARL6IP1Q15041 203 aa11.88□□□□□ -0.51
COL16A1-217ENST00000532877 GRK1Q15835 563 aa11.88□□□□□ -0.51
COL16A1-217ENST00000532877 CDNFQ49AH0 187 aa11.88□□□□□ -0.51
COL16A1-217ENST00000532877 SHEQ5VZ18 495 aa11.88□□□□□ -0.51
COL16A1-217ENST00000532877 NLRC3Q7RTR2 1065 aa11.88□□□□□ -0.51
COL16A1-217ENST00000532877 FGFRL1Q8N441 504 aa11.88□□□□□ -0.51
COL16A1-217ENST00000532877 OR4M2Q8NGB6 313 aa11.88□□□□□ -0.51
COL16A1-217ENST00000532877 OR8B3Q8NGG8 313 aa11.88□□□□□ -0.51
COL16A1-217ENST00000532877 CLDND2Q8NHS1 167 aa11.88□□□□□ -0.51
COL16A1-217ENST00000532877 PPP1R35Q8TAP8 253 aa11.88□□□□□ -0.51
COL16A1-217ENST00000532877 PLPPR1Q8TBJ4 325 aa11.88□□□□□ -0.51
COL16A1-217ENST00000532877 GCDHQ92947 438 aaPredicted RBP11.88□□□□□ -0.51
COL16A1-217ENST00000532877 NEIL1Q96FI4 390 aaPredicted RBP11.88□□□□□ -0.51
COL16A1-217ENST00000532877 OR8B2Q96RD0 313 aa11.88□□□□□ -0.51
COL16A1-217ENST00000532877 MDFIQ99750 246 aa11.88□□□□□ -0.51
COL16A1-217ENST00000532877 SOSTQ9BQB4 213 aa11.88□□□□□ -0.51
COL16A1-217ENST00000532877 FAM234AQ9H0X4 552 aa11.88□□□□□ -0.51
COL16A1-217ENST00000532877 AUNIPQ9H7T9 357 aa11.88□□□□□ -0.51
COL16A1-217ENST00000532877 PATZ1Q9HBE1 687 aaKnown RBP11.88□□□□□ -0.51
COL16A1-217ENST00000532877 AKIP1Q9NQ31 210 aa11.88□□□□□ -0.51
COL16A1-217ENST00000532877 SLC25A10Q9UBX3 287 aaPredicted RBP11.88□□□□□ -0.51
COL16A1-217ENST00000532877 AK3Q9UIJ7 227 aa11.88□□□□□ -0.51
COL16A1-217ENST00000532877 PCDHB10Q9UN67 800 aa11.88□□□□□ -0.51
COL16A1-217ENST00000532877 MRPS7Q9Y2R9 242 aaKnown RBP11.88□□□□□ -0.51
COL16A1-217ENST00000532877 STAB1Q9NY15 2570 aa11.87□□□□□ -0.51
COL16A1-217ENST00000532877 MALRD1Q5VYJ5 2156 aa11.87□□□□□ -0.51
COL16A1-217ENST00000532877 FABP12A6NFH5 140 aa11.87□□□□□ -0.51
COL16A1-217ENST00000532877 DVL1O14640 695 aa11.87□□□□□ -0.51
COL16A1-217ENST00000532877 NDUFB3O43676 98 aa11.87□□□□□ -0.51
COL16A1-217ENST00000532877 TPPPO94811 219 aa11.87□□□□□ -0.51
COL16A1-217ENST00000532877 HLA-DQB1P01920 261 aa11.87□□□□□ -0.51
COL16A1-217ENST00000532877 WNT2P09544 360 aa11.87□□□□□ -0.51
COL16A1-217ENST00000532877 KCNJ3P48549 501 aa11.87□□□□□ -0.51
COL16A1-217ENST00000532877 EDDM3AQ14507 147 aa11.87□□□□□ -0.51
COL16A1-217ENST00000532877 LRRC10Q5BKY1 277 aa11.87□□□□□ -0.51
COL16A1-217ENST00000532877 HACD4Q5VWC8 232 aa11.87□□□□□ -0.51
COL16A1-217ENST00000532877 FAM131AQ6UXB0 335 aa11.87□□□□□ -0.51
COL16A1-217ENST00000532877 ZNF841Q6ZN19 808 aa11.87□□□□□ -0.51
COL16A1-217ENST00000532877 SNX29P2Q8IUI4 249 aa11.87□□□□□ -0.51
COL16A1-217ENST00000532877 MFSD4AQ8N468 514 aa11.87□□□□□ -0.51
COL16A1-217ENST00000532877 NUDCD2Q8WVJ2 157 aa11.87□□□□□ -0.51
COL16A1-217ENST00000532877 COQ2Q96H96 371 aa11.87□□□□□ -0.51
COL16A1-217ENST00000532877 ETAA1Q9NY74 926 aa11.87□□□□□ -0.51
COL16A1-217ENST00000532877 DOCK11Q5JSL3 2073 aa11.87□□□□□ -0.51
COL16A1-217ENST00000532877 MGST3O14880 152 aa11.86□□□□□ -0.51
COL16A1-217ENST00000532877 MELTFP08582 738 aa11.86□□□□□ -0.51
COL16A1-217ENST00000532877 NDUFB7P17568 137 aa11.86□□□□□ -0.51
COL16A1-217ENST00000532877 SEC61A1P61619 476 aaKnown RBP11.86□□□□□ -0.51
COL16A1-217ENST00000532877 LMO4P61968 165 aa11.86□□□□□ -0.51
COL16A1-217ENST00000532877 PAX5Q02548 391 aa11.86□□□□□ -0.51
COL16A1-217ENST00000532877 LSAMPQ13449 338 aa11.86□□□□□ -0.51
COL16A1-217ENST00000532877 ZNF79Q15937 498 aa11.86□□□□□ -0.51
COL16A1-217ENST00000532877 PNLIPRP3Q17RR3 467 aa11.86□□□□□ -0.51
COL16A1-217ENST00000532877 RSBN1Q5VWQ0 802 aaPredicted RBP11.86□□□□□ -0.51
COL16A1-217ENST00000532877 PYHIN1Q6K0P9 492 aa11.86□□□□□ -0.51
COL16A1-217ENST00000532877 OR5D13Q8NGL4 314 aa11.86□□□□□ -0.51
COL16A1-217ENST00000532877 Q96MF0 132 aa11.86□□□□□ -0.51
COL16A1-217ENST00000532877 ABHD1Q96SE0 405 aa11.86□□□□□ -0.51
COL16A1-217ENST00000532877 HDHD3Q9BSH5 251 aaPredicted RBP11.86□□□□□ -0.51
COL16A1-217ENST00000532877 C12orf4Q9NQ89 552 aa11.86□□□□□ -0.51
COL16A1-217ENST00000532877 ING3Q9NXR8 418 aa11.86□□□□□ -0.51
COL16A1-217ENST00000532877 RABL2AQ9UBK7 228 aaPredicted RBP11.86□□□□□ -0.51
COL16A1-217ENST00000532877 RABL2BQ9UNT1 228 aa11.86□□□□□ -0.51
COL16A1-217ENST00000532877 DSCAML1Q8TD84 2053 aa11.86□□□□□ -0.51
COL16A1-217ENST00000532877 ATRQ13535 2644 aa11.85□□□□□ -0.51
COL16A1-217ENST00000532877 TLN2Q9Y4G6 2542 aa11.85□□□□□ -0.51
COL16A1-217ENST00000532877 A0A096LNT2 108 aa11.85□□□□□ -0.51
COL16A1-217ENST00000532877 MEIOCA2RUB1 952 aa11.85□□□□□ -0.51
COL16A1-217ENST00000532877 SSX5O60225 188 aa11.85□□□□□ -0.51
COL16A1-217ENST00000532877 CA11O75493 328 aa11.85□□□□□ -0.51
COL16A1-217ENST00000532877 CD3GP09693 182 aa11.85□□□□□ -0.51
COL16A1-217ENST00000532877 PTBP1P26599 531 aaKnown RBP eCLIP11.85□□□□□ -0.51
COL16A1-217ENST00000532877 IL2RGP31785 369 aa11.85□□□□□ -0.51
COL16A1-217ENST00000532877 P2RX3P56373 397 aa11.85□□□□□ -0.51
COL16A1-217ENST00000532877 GNG2P59768 71 aa11.85□□□□□ -0.51
COL16A1-217ENST00000532877 AESQ08117 197 aa11.85□□□□□ -0.51
COL16A1-217ENST00000532877 ARFRP1Q13795 201 aa11.85□□□□□ -0.51
COL16A1-217ENST00000532877 KRBOX4Q5JUW0 171 aa11.85□□□□□ -0.51
COL16A1-217ENST00000532877 WDR25Q64LD2 544 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms