RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 TMEM50AO95807 157 aa7.21□□□□□ -1.25
CTNND1-231ENST00000532463 DEGS2Q6QHC5 323 aa7.21□□□□□ -1.25
CTNND1-231ENST00000532463 TEPPQ6URK8 271 aa7.21□□□□□ -1.25
CTNND1-231ENST00000532463 OVCH2Q7RTZ1 564 aa7.21□□□□□ -1.25
CTNND1-231ENST00000532463 LINC00518Q8N0U6 118 aa7.21□□□□□ -1.25
CTNND1-231ENST00000532463 OR4D5Q8NGN0 318 aa7.21□□□□□ -1.25
CTNND1-231ENST00000532463 MS4A3Q96HJ5 214 aa7.21□□□□□ -1.25
CTNND1-231ENST00000532463 MARVELD1Q9BSK0 173 aa7.21□□□□□ -1.25
CTNND1-231ENST00000532463 MRPL18Q9H0U6 180 aaKnown RBP7.21□□□□□ -1.25
CTNND1-231ENST00000532463 SPRY3O43610 288 aa7.21□□□□□ -1.26
CTNND1-231ENST00000532463 PLAUP00749 431 aa7.21□□□□□ -1.26
CTNND1-231ENST00000532463 SFTPCP11686 197 aa7.21□□□□□ -1.26
CTNND1-231ENST00000532463 VDAC1P21796 283 aa7.21□□□□□ -1.26
CTNND1-231ENST00000532463 GALP22466 123 aa7.21□□□□□ -1.26
CTNND1-231ENST00000532463 TM4SF1P30408 202 aa7.21□□□□□ -1.26
CTNND1-231ENST00000532463 Q6ZSR9 355 aa7.21□□□□□ -1.26
CTNND1-231ENST00000532463 SDF2Q99470 211 aa7.21□□□□□ -1.26
CTNND1-231ENST00000532463 ANKRD10Q9NXR5 420 aa7.21□□□□□ -1.26
CTNND1-231ENST00000532463 DHCR7Q9UBM7 475 aaKnown RBP7.21□□□□□ -1.26
CTNND1-231ENST00000532463 PRNDQ9UKY0 176 aa7.21□□□□□ -1.26
CTNND1-231ENST00000532463 GFYI3L273 518 aa7.21□□□□□ -1.26
CTNND1-231ENST00000532463 CHST1O43916 411 aa7.21□□□□□ -1.26
CTNND1-231ENST00000532463 PDCD6O75340 191 aa7.21□□□□□ -1.26
CTNND1-231ENST00000532463 CDKN2AP42771 156 aaKnown RBP7.21□□□□□ -1.26
CTNND1-231ENST00000532463 CXCL12P48061 93 aa7.21□□□□□ -1.26
CTNND1-231ENST00000532463 RTN4RL1Q86UN2 441 aaPredicted RBP7.21□□□□□ -1.26
CTNND1-231ENST00000532463 KISS1RQ969F8 398 aaPredicted RBP7.21□□□□□ -1.26
CTNND1-231ENST00000532463 PDXPQ96GD0 296 aa7.21□□□□□ -1.26
CTNND1-231ENST00000532463 PAXXQ9BUH6 204 aa7.21□□□□□ -1.26
CTNND1-231ENST00000532463 CYSLTR1Q9Y271 337 aa7.21□□□□□ -1.26
CTNND1-231ENST00000532463 BCL2P10415 239 aa7.21□□□□□ -1.26
CTNND1-231ENST00000532463 CD22P20273 847 aa7.21□□□□□ -1.26
CTNND1-231ENST00000532463 SERF2P84101 59 aa7.21□□□□□ -1.26
CTNND1-231ENST00000532463 OR10J6PQ8NGY7 276 aa7.21□□□□□ -1.26
CTNND1-231ENST00000532463 ASB5Q8WWX0 329 aa7.21□□□□□ -1.26
CTNND1-231ENST00000532463 DDB2Q92466 427 aa7.21□□□□□ -1.26
CTNND1-231ENST00000532463 MRGPRX4Q96LA9 322 aa7.21□□□□□ -1.26
CTNND1-231ENST00000532463 IP6K3Q96PC2 410 aa7.21□□□□□ -1.26
CTNND1-231ENST00000532463 HSPB7Q9UBY9 170 aa7.21□□□□□ -1.26
CTNND1-231ENST00000532463 HIGD1AQ9Y241 93 aa7.21□□□□□ -1.26
CTNND1-231ENST00000532463 IGKV3-7A0A075B6H7 116 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 TRAV8-6A0A0B4J262 113 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 A0A0G2JLL6 359 aaPredicted RBP7.2□□□□□ -1.26
CTNND1-231ENST00000532463 A0A1W2PNR3 127 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 NPIPB8E9PQR5 432 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 NPIPB9F8W1W9 429 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 NPIPB7O75200 414 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 B4GALT1P15291 398 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 TNFSF10P50591 281 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 HBBP68871 147 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 NTHL1P78549 312 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 CCL14Q16627 93 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 FAM209AQ5JX71 171 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 PRRT2Q7Z6L0 340 aaPredicted RBP7.2□□□□□ -1.26
CTNND1-231ENST00000532463 SPNS2Q8IVW8 549 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 TTC9BQ8N6N2 239 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 RFESDQ8TAC1 157 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 NUDT8Q8WV74 236 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 ISG20L2Q9H9L3 353 aaKnown RBP7.2□□□□□ -1.26
CTNND1-231ENST00000532463 B9D1Q9UPM9 204 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 PPIL1Q9Y3C6 166 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 TRBV23-1A0A0A0MS06 115 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 MMP16P51512 607 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 LIM2P55344 173 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 MRPS11P82912 194 aaKnown RBP7.2□□□□□ -1.26
CTNND1-231ENST00000532463 SH2D5Q6ZV89 423 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 MRPL52Q86TS9 123 aaKnown RBP7.2□□□□□ -1.26
CTNND1-231ENST00000532463 ZNF707Q96C28 371 aaPredicted RBP7.2□□□□□ -1.26
CTNND1-231ENST00000532463 NRIP2Q9BQI9 281 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 DEFB127Q9H1M4 99 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 SMOC1Q9H4F8 434 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 WSB2Q9NYS7 404 aaPredicted RBP7.2□□□□□ -1.26
CTNND1-231ENST00000532463 TRBV9A0A0B4J1U6 114 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 CXCL13O43927 109 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 CDC14BO60729 498 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 PRSS36Q5K4E3 855 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 BCORP1Q8N888 145 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 OR6X1Q8NH79 312 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 OR1F12Q8NHA8 337 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 MS4A7Q9GZW8 240 aaPredicted RBP7.2□□□□□ -1.26
CTNND1-231ENST00000532463 AURKAIP1Q9NWT8 199 aaPredicted RBP7.2□□□□□ -1.26
CTNND1-231ENST00000532463 MED29Q9NX70 200 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 SHPRHQ149N8 1683 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 URB1O60287 2271 aaKnown RBP7.2□□□□□ -1.26
CTNND1-231ENST00000532463 TMEM272A0A1B0GTI8 110 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 MDKP21741 143 aaPredicted RBP7.2□□□□□ -1.26
CTNND1-231ENST00000532463 COX7A1P24310 79 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 FGF9P31371 208 aaPredicted RBP7.2□□□□□ -1.26
CTNND1-231ENST00000532463 EWSR1Q01844 656 aaKnown RBP eCLIP7.2□□□□□ -1.26
CTNND1-231ENST00000532463 KISS1Q15726 138 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 MDP1Q86V88 176 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 ZNF414Q96IQ9 312 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 SARGQ9BW04 601 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 CA10Q9NS85 328 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 HDGFL3Q9Y3E1 203 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 MTCH2Q9Y6C9 303 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 SNED1Q8TER0 1413 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 NFAT5O94916 1531 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 FAM157AC9JC47 383 aa7.2□□□□□ -1.26
CTNND1-231ENST00000532463 PRKNO60260 465 aaPredicted RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms