RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 THTPAQ9BU02 230 aa1.66□□□□□ -2.14
CD44-234ENST00000531873 SLC19A3Q9BZV2 496 aa1.66□□□□□ -2.14
CD44-234ENST00000531873 TSGA10Q9BZW7 698 aa1.66□□□□□ -2.14
CD44-234ENST00000531873 WDR54Q9H977 334 aa1.66□□□□□ -2.14
CD44-234ENST00000531873 ASCL3Q9NQ33 180 aa1.66□□□□□ -2.14
CD44-234ENST00000531873 CYTL1Q9NRR1 136 aa1.66□□□□□ -2.14
CD44-234ENST00000531873 TAC3Q9UHF0 121 aa1.66□□□□□ -2.14
CD44-234ENST00000531873 NOSIPQ9Y314 301 aaKnown RBP1.66□□□□□ -2.14
CD44-234ENST00000531873 NCAPD3P42695 1498 aa1.66□□□□□ -2.14
CD44-234ENST00000531873 SHROOM3Q8TF72 1996 aa1.65□□□□□ -2.14
CD44-234ENST00000531873 A0A1W2PRG6 482 aa1.65□□□□□ -2.15
CD44-234ENST00000531873 ZNF98A6NK75 572 aa1.65□□□□□ -2.15
CD44-234ENST00000531873 FAM183AA6NL82 134 aa1.65□□□□□ -2.15
CD44-234ENST00000531873 CD300LBA8K4G0 201 aa1.65□□□□□ -2.15
CD44-234ENST00000531873 KLRC4-KLRK1H3BQV0 150 aa1.65□□□□□ -2.15
CD44-234ENST00000531873 ITGB1BP1O14713 200 aa1.65□□□□□ -2.15
CD44-234ENST00000531873 TOX3O15405 576 aaPredicted RBP1.65□□□□□ -2.15
CD44-234ENST00000531873 AQP9O43315 295 aa1.65□□□□□ -2.15
CD44-234ENST00000531873 CNMDO75829 334 aa1.65□□□□□ -2.15
CD44-234ENST00000531873 SOD3P08294 240 aa1.65□□□□□ -2.15
CD44-234ENST00000531873 SPNP16150 400 aa1.65□□□□□ -2.15
CD44-234ENST00000531873 CELP19835 753 aa1.65□□□□□ -2.15
CD44-234ENST00000531873 PRTN3P24158 256 aa1.65□□□□□ -2.15
CD44-234ENST00000531873 PSMD7P51665 324 aa1.65□□□□□ -2.15
CD44-234ENST00000531873 RAB8AP61006 207 aa1.65□□□□□ -2.15
CD44-234ENST00000531873 TMEM215Q68D42 235 aa1.65□□□□□ -2.15
CD44-234ENST00000531873 CLEC20AQ6ZU45 233 aa1.65□□□□□ -2.15
CD44-234ENST00000531873 FAM19A3Q7Z5A8 133 aa1.65□□□□□ -2.15
CD44-234ENST00000531873 TMEM144Q7Z5S9 345 aa1.65□□□□□ -2.15
CD44-234ENST00000531873 DPPA2Q7Z7J5 298 aa1.65□□□□□ -2.15
CD44-234ENST00000531873 C10orf107Q8IVU9 208 aa1.65□□□□□ -2.15
CD44-234ENST00000531873 BLIDQ8IZY5 108 aa1.65□□□□□ -2.15
CD44-234ENST00000531873 SLC25A45Q8N413 288 aa1.65□□□□□ -2.15
CD44-234ENST00000531873 RNF182Q8N6D2 247 aa1.65□□□□□ -2.15
CD44-234ENST00000531873 LFNGQ8NES3 379 aa1.65□□□□□ -2.15
CD44-234ENST00000531873 OR8S1Q8NH09 359 aa1.65□□□□□ -2.15
CD44-234ENST00000531873 DEDD2Q8WXF8 326 aa1.65□□□□□ -2.15
CD44-234ENST00000531873 APOL4Q9BPW4 351 aa1.65□□□□□ -2.15
CD44-234ENST00000531873 RSPO3Q9BXY4 272 aaPredicted RBP1.65□□□□□ -2.15
CD44-234ENST00000531873 IMP3Q9NV31 184 aaKnown RBP1.65□□□□□ -2.15
CD44-234ENST00000531873 IL37Q9NZH6 218 aa1.65□□□□□ -2.15
CD44-234ENST00000531873 MARCOQ9UEW3 520 aaPredicted RBP1.65□□□□□ -2.15
CD44-234ENST00000531873 TBL2Q9Y4P3 447 aaKnown RBP1.65□□□□□ -2.15
CD44-234ENST00000531873 CACNA1GO43497 2377 aa1.65□□□□□ -2.15
CD44-234ENST00000531873 NOS1P29475 1434 aa1.65□□□□□ -2.15
CD44-234ENST00000531873 RAD50Q92878 1312 aa1.65□□□□□ -2.15
CD44-234ENST00000531873 LAMC3Q9Y6N6 1575 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 IGHV2-26A0A0B4J1V2 119 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 IGHV3-43A0A0B4J1X8 118 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 TRAV8-2A0A0B4J237 113 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 SPRR5A0A1B0GTR4 108 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 C9J4A7 227 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 TMEM250H0YL14 139 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 I3L4J1 428 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 MFNGO00587 321 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 GPR171O14626 319 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 CYTH3O43739 400 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 SYNGR1O43759 233 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 ENTPD6O75354 484 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 RBBP9O75884 186 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 FSTL3O95633 263 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 RAB36O95755 333 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 NRASP01111 189 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 HRASP01112 189 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 KRASP01116 189 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 CGB3P0DN86 165 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 CGB7P0DN87 165 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 ELK4P28324 431 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 TGFBR2P37173 567 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 GDI2P50395 445 aaKnown RBP1.64□□□□□ -2.15
CD44-234ENST00000531873 RPL14P50914 215 aaKnown RBP1.64□□□□□ -2.15
CD44-234ENST00000531873 EMP2P54851 167 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 RHOAP61586 193 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 RBX1P62877 108 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 FAM3AP98173 230 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 EXOC3L4Q17RC7 722 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 NXNL2Q5VZ03 156 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 XKRXQ6PP77 449 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 SPINT4Q6UDR6 99 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 DEFB132Q7Z7B7 95 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 OR5L1Q8NGL2 311 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 OR5AK3PQ8NH89 298 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 TWIST2Q8WVJ9 160 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 DNAJB3Q8WWF6 145 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 C7orf50Q9BRJ6 194 aaKnown RBP1.64□□□□□ -2.15
CD44-234ENST00000531873 ANAPC13Q9BS18 74 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 DHCR7Q9UBM7 475 aaKnown RBP1.64□□□□□ -2.15
CD44-234ENST00000531873 ATP6V1DQ9Y5K8 247 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 SLC22A7Q9Y694 548 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 ZNF780BQ9Y6R6 833 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 UHRF1BP1Q6BDS2 1440 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 SDK2Q58EX2 2172 aa1.64□□□□□ -2.15
CD44-234ENST00000531873 DSCAML1Q8TD84 2053 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 TEX14Q8IWB6 1497 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 IFT140Q96RY7 1462 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 ZNF638Q14966 1978 aaKnown RBP1.63□□□□□ -2.15
CD44-234ENST00000531873 IGLV2-18A0A075B6J9 118 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 KCNK2O95069 426 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 ORM1P02763 201 aa1.63□□□□□ -2.15
CD44-234ENST00000531873 IGLV7-43P04211 117 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms