RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 CLN6Q9NWW5 311 aa7.24□□□□□ -1.25
NEDD8-206ENST00000531430 IDI2-AS1Q9NZ38 188 aa7.24□□□□□ -1.25
NEDD8-206ENST00000531430 OR6C3Q9NZP0 311 aa7.24□□□□□ -1.25
NEDD8-206ENST00000531430 PSG11Q9UQ72 335 aa7.24□□□□□ -1.25
NEDD8-206ENST00000531430 SIRT4Q9Y6E7 314 aaPredicted RBP7.24□□□□□ -1.25
NEDD8-206ENST00000531430 TRAV39A0A0B4J263 110 aa7.23□□□□□ -1.25
NEDD8-206ENST00000531430 METTL15A6NJ78 407 aa7.23□□□□□ -1.25
NEDD8-206ENST00000531430 CCRL2O00421 344 aa7.23□□□□□ -1.25
NEDD8-206ENST00000531430 RRP9O43818 475 aaKnown RBP7.23□□□□□ -1.25
NEDD8-206ENST00000531430 SNX3O60493 162 aa7.23□□□□□ -1.25
NEDD8-206ENST00000531430 SAP30O75446 220 aa7.23□□□□□ -1.25
NEDD8-206ENST00000531430 FAM107AO95990 144 aa7.23□□□□□ -1.25
NEDD8-206ENST00000531430 GAPDHP04406 335 aaKnown RBP7.23□□□□□ -1.25
NEDD8-206ENST00000531430 ELANEP08246 267 aa7.23□□□□□ -1.25
NEDD8-206ENST00000531430 FRMD6-AS1P0C7T7 363 aa7.23□□□□□ -1.25
NEDD8-206ENST00000531430 TMEM225BP0DP42 221 aa7.23□□□□□ -1.25
NEDD8-206ENST00000531430 CCL1P22362 96 aa7.23□□□□□ -1.25
NEDD8-206ENST00000531430 FOXE3Q13461 319 aa7.23□□□□□ -1.25
NEDD8-206ENST00000531430 PTGES3Q15185 160 aaKnown RBP7.23□□□□□ -1.25
NEDD8-206ENST00000531430 SRSF7Q16629 238 aaKnown RBP eCLIP7.23□□□□□ -1.25
NEDD8-206ENST00000531430 FAM53AQ6NSI3 398 aaPredicted RBP7.23□□□□□ -1.25
NEDD8-206ENST00000531430 LHFPL2Q6ZUX7 228 aa7.23□□□□□ -1.25
NEDD8-206ENST00000531430 SSX6Q7RTT6 188 aa7.23□□□□□ -1.25
NEDD8-206ENST00000531430 OR10H4Q8NGA5 316 aa7.23□□□□□ -1.25
NEDD8-206ENST00000531430 OR2T10Q8NGZ9 312 aa7.23□□□□□ -1.25
NEDD8-206ENST00000531430 MRGPRDQ8TDS7 321 aa7.23□□□□□ -1.25
NEDD8-206ENST00000531430 CCDC124Q96CT7 223 aaKnown RBP7.23□□□□□ -1.25
NEDD8-206ENST00000531430 RBMXL1Q96E39 390 aaKnown RBP7.23□□□□□ -1.25
NEDD8-206ENST00000531430 ADAT3Q96EY9 351 aaPredicted RBP7.23□□□□□ -1.25
NEDD8-206ENST00000531430 COQ2Q96H96 371 aa7.23□□□□□ -1.25
NEDD8-206ENST00000531430 KIRREL1Q96J84 757 aa7.23□□□□□ -1.25
NEDD8-206ENST00000531430 EAF1Q96JC9 268 aaPredicted RBP7.23□□□□□ -1.25
NEDD8-206ENST00000531430 MNTQ99583 582 aa7.23□□□□□ -1.25
NEDD8-206ENST00000531430 BARHL1Q9BZE3 327 aa7.23□□□□□ -1.25
NEDD8-206ENST00000531430 CHST5Q9GZS9 411 aa7.23□□□□□ -1.25
NEDD8-206ENST00000531430 ADGRL4Q9HBW9 690 aa7.23□□□□□ -1.25
NEDD8-206ENST00000531430 SLC25A19Q9HC21 320 aa7.23□□□□□ -1.25
NEDD8-206ENST00000531430 KRT84Q9NSB2 600 aa7.23□□□□□ -1.25
NEDD8-206ENST00000531430 CALYQ9NYX4 217 aa7.23□□□□□ -1.25
NEDD8-206ENST00000531430 KIF25Q9UIL4 384 aa7.23□□□□□ -1.25
NEDD8-206ENST00000531430 HUWE1Q7Z6Z7 4374 aaKnown RBP7.23□□□□□ -1.25
NEDD8-206ENST00000531430 A0A087X0M5 115 aa7.22□□□□□ -1.25
NEDD8-206ENST00000531430 IGKV1-9A0A0C4DH69 117 aa7.22□□□□□ -1.25
NEDD8-206ENST00000531430 IGKV1-12A0A0C4DH73 117 aa7.22□□□□□ -1.25
NEDD8-206ENST00000531430 LOC107986453A0A1B0GWG9 222 aa7.22□□□□□ -1.25
NEDD8-206ENST00000531430 A0A1B0GX30 115 aa7.22□□□□□ -1.25
NEDD8-206ENST00000531430 A0A1W2PPI3 338 aa7.22□□□□□ -1.25
NEDD8-206ENST00000531430 H0YJX3 145 aa7.22□□□□□ -1.25
NEDD8-206ENST00000531430 SLC33A1O00400 549 aaPredicted RBP7.22□□□□□ -1.25
NEDD8-206ENST00000531430 MPZL2O60487 215 aa7.22□□□□□ -1.25
NEDD8-206ENST00000531430 IGKV1D-12P01611 117 aa7.22□□□□□ -1.25
NEDD8-206ENST00000531430 GABPB1Q06547 395 aaPredicted RBP7.22□□□□□ -1.25
NEDD8-206ENST00000531430 GK3PQ14409 553 aa7.22□□□□□ -1.25
NEDD8-206ENST00000531430 TP53I3Q53FA7 332 aa7.22□□□□□ -1.25
NEDD8-206ENST00000531430 PAN3Q58A45 887 aaKnown RBP7.22□□□□□ -1.25
NEDD8-206ENST00000531430 Q6P435 159 aa7.22□□□□□ -1.25
NEDD8-206ENST00000531430 Q6ZSR3 168 aa7.22□□□□□ -1.25
NEDD8-206ENST00000531430 OR8H3Q8N146 312 aa7.22□□□□□ -1.25
NEDD8-206ENST00000531430 PRSS35Q8N3Z0 413 aa7.22□□□□□ -1.25
NEDD8-206ENST00000531430 CCDC54Q8NEL0 328 aa7.22□□□□□ -1.25
NEDD8-206ENST00000531430 DNAAF1Q8NEP3 725 aa7.22□□□□□ -1.25
NEDD8-206ENST00000531430 OR13A1Q8NGR1 328 aa7.22□□□□□ -1.25
NEDD8-206ENST00000531430 UBALD1Q8TB05 177 aa7.22□□□□□ -1.25
NEDD8-206ENST00000531430 CANT1Q8WVQ1 401 aa7.22□□□□□ -1.25
NEDD8-206ENST00000531430 PP6455Q8WZ26 134 aa7.22□□□□□ -1.25
NEDD8-206ENST00000531430 NSL1Q96IY1 281 aa7.22□□□□□ -1.25
NEDD8-206ENST00000531430 OPALINQ96PE5 141 aa7.22□□□□□ -1.25
NEDD8-206ENST00000531430 ABCG5Q9H222 651 aa7.22□□□□□ -1.25
NEDD8-206ENST00000531430 GNG8Q9UK08 70 aa7.22□□□□□ -1.25
NEDD8-206ENST00000531430 WSB1Q9Y6I7 421 aa7.22□□□□□ -1.25
NEDD8-206ENST00000531430 IGHV1-3A0A0C4DH29 117 aa7.21□□□□□ -1.26
NEDD8-206ENST00000531430 A0A1W2PQL4 384 aaPredicted RBP7.21□□□□□ -1.26
NEDD8-206ENST00000531430 HSD17B6O14756 317 aa7.21□□□□□ -1.26
NEDD8-206ENST00000531430 HCKP08631 526 aa7.21□□□□□ -1.26
NEDD8-206ENST00000531430 SPNP16150 400 aa7.21□□□□□ -1.26
NEDD8-206ENST00000531430 HTR1FP30939 366 aa7.21□□□□□ -1.26
NEDD8-206ENST00000531430 INSL3P51460 131 aa7.21□□□□□ -1.26
NEDD8-206ENST00000531430 TMEM244Q5VVB8 128 aa7.21□□□□□ -1.26
NEDD8-206ENST00000531430 FAM220AQ7Z4H9 259 aa7.21□□□□□ -1.26
NEDD8-206ENST00000531430 ZNF429Q86V71 674 aa7.21□□□□□ -1.26
NEDD8-206ENST00000531430 SPATA24Q86W54 205 aa7.21□□□□□ -1.26
NEDD8-206ENST00000531430 TGIF2LXQ8IUE1 241 aa7.21□□□□□ -1.26
NEDD8-206ENST00000531430 ADGRG5Q8IZF4 528 aa7.21□□□□□ -1.26
NEDD8-206ENST00000531430 Q8N9W7 124 aa7.21□□□□□ -1.26
NEDD8-206ENST00000531430 OR13C9Q8NGT0 318 aa7.21□□□□□ -1.26
NEDD8-206ENST00000531430 TMEM163Q8TC26 289 aa7.21□□□□□ -1.26
NEDD8-206ENST00000531430 C4orf3Q8WVX3 66 aa7.21□□□□□ -1.26
NEDD8-206ENST00000531430 DCUN1D4Q92564 292 aa7.21□□□□□ -1.26
NEDD8-206ENST00000531430 UTP4Q969X6 686 aaKnown RBP7.21□□□□□ -1.26
NEDD8-206ENST00000531430 KCTD7Q96MP8 289 aa7.21□□□□□ -1.26
NEDD8-206ENST00000531430 CITED4Q96RK1 184 aa7.21□□□□□ -1.26
NEDD8-206ENST00000531430 OSBPL10Q9BXB5 764 aa7.21□□□□□ -1.26
NEDD8-206ENST00000531430 PRRG3Q9BZD7 231 aa7.21□□□□□ -1.26
NEDD8-206ENST00000531430 COMMD4Q9H0A8 199 aa7.21□□□□□ -1.26
NEDD8-206ENST00000531430 LIN7CQ9NUP9 197 aaKnown RBP7.21□□□□□ -1.26
NEDD8-206ENST00000531430 FAM118AQ9NWS6 357 aa7.21□□□□□ -1.26
NEDD8-206ENST00000531430 ARL2BPQ9Y2Y0 163 aa7.21□□□□□ -1.26
NEDD8-206ENST00000531430 TRIM64CA6NLI5 447 aa7.2□□□□□ -1.26
NEDD8-206ENST00000531430 ZNF736B4DX44 427 aaPredicted RBP7.2□□□□□ -1.26
NEDD8-206ENST00000531430 OVOL1O14753 267 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms