RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 C6orf201Q7Z4U5 140 aa12.27□□□□□ -0.45
PCF11-204ENST00000530660 PLPPR1Q8TBJ4 325 aa12.27□□□□□ -0.45
PCF11-204ENST00000530660 OR51E1Q8TCB6 317 aa12.27□□□□□ -0.45
PCF11-204ENST00000530660 LIPHQ8WWY8 451 aa12.27□□□□□ -0.45
PCF11-204ENST00000530660 MSI2Q96DH6 328 aaKnown RBP12.27□□□□□ -0.45
PCF11-204ENST00000530660 LOXL4Q96JB6 756 aa12.27□□□□□ -0.45
PCF11-204ENST00000530660 PLEKHF2Q9H8W4 249 aa12.27□□□□□ -0.45
PCF11-204ENST00000530660 EDDM13A0A1B0GTR0 161 aa12.27□□□□□ -0.45
PCF11-204ENST00000530660 PHF1O43189 567 aaPredicted RBP12.27□□□□□ -0.45
PCF11-204ENST00000530660 IL3RAP26951 378 aa12.27□□□□□ -0.45
PCF11-204ENST00000530660 RPS15AP62244 130 aaKnown RBP12.27□□□□□ -0.45
PCF11-204ENST00000530660 RPL19P84098 196 aaKnown RBP12.27□□□□□ -0.45
PCF11-204ENST00000530660 CYP2G1PQ6ZSU1 146 aa12.27□□□□□ -0.45
PCF11-204ENST00000530660 FAM57BQ71RH2 274 aa12.27□□□□□ -0.45
PCF11-204ENST00000530660 H1FOOQ8IZA3 346 aaPredicted RBP12.27□□□□□ -0.45
PCF11-204ENST00000530660 OR5AS1Q8N127 324 aa12.27□□□□□ -0.45
PCF11-204ENST00000530660 D2HGDHQ8N465 521 aa12.27□□□□□ -0.45
PCF11-204ENST00000530660 CAPNS2Q96L46 248 aa12.27□□□□□ -0.45
PCF11-204ENST00000530660 CLUHP3Q96NS8 147 aa12.27□□□□□ -0.45
PCF11-204ENST00000530660 RNF2Q99496 336 aa12.27□□□□□ -0.45
PCF11-204ENST00000530660 RBM24Q9BX46 236 aaKnown RBP12.27□□□□□ -0.45
PCF11-204ENST00000530660 TBL1XR1Q9BZK7 514 aa12.27□□□□□ -0.45
PCF11-204ENST00000530660 WWTR1Q9GZV5 400 aa12.27□□□□□ -0.45
PCF11-204ENST00000530660 IGHV2-70DA0A0C4DH43 119 aa12.26□□□□□ -0.45
PCF11-204ENST00000530660 ADH5P11766 374 aa12.26□□□□□ -0.45
PCF11-204ENST00000530660 ANOS1P23352 680 aa12.26□□□□□ -0.45
PCF11-204ENST00000530660 OPRM1P35372 400 aa12.26□□□□□ -0.45
PCF11-204ENST00000530660 WBP2NLQ6ICG8 309 aa12.26□□□□□ -0.45
PCF11-204ENST00000530660 ARHGEF39Q8N4T4 335 aa12.26□□□□□ -0.45
PCF11-204ENST00000530660 DYRK2Q92630 601 aa12.26□□□□□ -0.45
PCF11-204ENST00000530660 CTHRC1Q96CG8 243 aa12.26□□□□□ -0.45
PCF11-204ENST00000530660 PECRQ9BY49 303 aa12.26□□□□□ -0.45
PCF11-204ENST00000530660 KLHL13Q9P2N7 655 aa12.26□□□□□ -0.45
PCF11-204ENST00000530660 WIPI2Q9Y4P8 454 aa12.26□□□□□ -0.45
PCF11-204ENST00000530660 A0A0U1RQK1 487 aa12.26□□□□□ -0.45
PCF11-204ENST00000530660 ZNF728P0DKX0 622 aa12.26□□□□□ -0.45
PCF11-204ENST00000530660 SMIM10L1P0DMW3 83 aa12.26□□□□□ -0.45
PCF11-204ENST00000530660 CD46P15529 392 aa12.26□□□□□ -0.45
PCF11-204ENST00000530660 ZNF20P17024 532 aa12.26□□□□□ -0.45
PCF11-204ENST00000530660 OCIAD2Q56VL3 154 aa12.26□□□□□ -0.45
PCF11-204ENST00000530660 FAM78BQ5VT40 261 aa12.26□□□□□ -0.45
PCF11-204ENST00000530660 MCEMP1Q8IX19 187 aa12.26□□□□□ -0.45
PCF11-204ENST00000530660 SMIM10Q96HG1 83 aa12.26□□□□□ -0.45
PCF11-204ENST00000530660 ZNF845Q96IR2 970 aaPredicted RBP12.26□□□□□ -0.45
PCF11-204ENST00000530660 OR2A5Q96R48 311 aa12.26□□□□□ -0.45
PCF11-204ENST00000530660 IMMP2LQ96T52 175 aa12.26□□□□□ -0.45
PCF11-204ENST00000530660 C11orf1Q9H5F2 150 aa12.26□□□□□ -0.45
PCF11-204ENST00000530660 SLC2A9Q9NRM0 540 aa12.26□□□□□ -0.45
PCF11-204ENST00000530660 TP53TG3Q9ULZ0 132 aa12.26□□□□□ -0.45
PCF11-204ENST00000530660 IGHV2OR16-5A0A0B4J2B6 119 aa12.26□□□□□ -0.45
PCF11-204ENST00000530660 EML2O95834 649 aa12.26□□□□□ -0.45
PCF11-204ENST00000530660 POU2F2P09086 479 aa12.26□□□□□ -0.45
PCF11-204ENST00000530660 PNMTP11086 282 aa12.26□□□□□ -0.45
PCF11-204ENST00000530660 NKX2-1P43699 371 aaPredicted RBP12.26□□□□□ -0.45
PCF11-204ENST00000530660 HNRNPA3P51991 378 aaKnown RBP12.26□□□□□ -0.45
PCF11-204ENST00000530660 LINC00310P59036 64 aa12.26□□□□□ -0.45
PCF11-204ENST00000530660 UBE2G2P60604 165 aa12.26□□□□□ -0.45
PCF11-204ENST00000530660 SPATA45Q537H7 98 aa12.26□□□□□ -0.45
PCF11-204ENST00000530660 LILRA6Q6PI73 481 aa12.26□□□□□ -0.45
PCF11-204ENST00000530660 NT5CQ8TCD5 201 aa12.26□□□□□ -0.45
PCF11-204ENST00000530660 NKX2-4Q9H2Z4 354 aa12.26□□□□□ -0.45
PCF11-204ENST00000530660 ZNF823P16415 610 aa12.25□□□□□ -0.45
PCF11-204ENST00000530660 TAS2R30P59541 319 aa12.25□□□□□ -0.45
PCF11-204ENST00000530660 RPL15P61313 204 aaKnown RBP12.25□□□□□ -0.45
PCF11-204ENST00000530660 AGBL4Q5VU57 503 aa12.25□□□□□ -0.45
PCF11-204ENST00000530660 BTF3L4Q96K17 158 aa12.25□□□□□ -0.45
PCF11-204ENST00000530660 CST9LQ9H4G1 147 aa12.25□□□□□ -0.45
PCF11-204ENST00000530660 LYRM2Q9NU23 88 aaPredicted RBP12.25□□□□□ -0.45
PCF11-204ENST00000530660 SLC45A2Q9UMX9 530 aa12.25□□□□□ -0.45
PCF11-204ENST00000530660 ATG2AQ2TAZ0 1938 aa12.25□□□□□ -0.45
PCF11-204ENST00000530660 NOTCH4Q99466 2003 aa12.25□□□□□ -0.45
PCF11-204ENST00000530660 MYO7AQ13402 2215 aa12.25□□□□□ -0.45
PCF11-204ENST00000530660 TRAV1-1A0A0B4J248 108 aa12.25□□□□□ -0.45
PCF11-204ENST00000530660 ZNF850A8MQ14 1090 aa12.25□□□□□ -0.45
PCF11-204ENST00000530660 H3BP45 60 aa12.25□□□□□ -0.45
PCF11-204ENST00000530660 MSTNO14793 375 aa12.25□□□□□ -0.45
PCF11-204ENST00000530660 HYPMO75409 117 aa12.25□□□□□ -0.45
PCF11-204ENST00000530660 MTCP1P56278 107 aa12.25□□□□□ -0.45
PCF11-204ENST00000530660 RPL27P61353 136 aaKnown RBP12.25□□□□□ -0.45
PCF11-204ENST00000530660 TESK1Q15569 626 aa12.25□□□□□ -0.45
PCF11-204ENST00000530660 CADM4Q8NFZ8 388 aa12.25□□□□□ -0.45
PCF11-204ENST00000530660 PBOV1Q9GZY1 135 aa12.25□□□□□ -0.45
PCF11-204ENST00000530660 FAM206AQ9NX38 181 aa12.25□□□□□ -0.45
PCF11-204ENST00000530660 GPR89AB7ZAQ6 455 aa12.24□□□□□ -0.45
PCF11-204ENST00000530660 PDGFBP01127 241 aaPredicted RBP12.24□□□□□ -0.45
PCF11-204ENST00000530660 GPR89BP0CG08 455 aa12.24□□□□□ -0.45
PCF11-204ENST00000530660 UBE2NP61088 152 aaKnown RBP12.24□□□□□ -0.45
PCF11-204ENST00000530660 EXT1Q16394 746 aa12.24□□□□□ -0.45
PCF11-204ENST00000530660 CENPVQ7Z7K6 275 aaPredicted RBP12.24□□□□□ -0.45
PCF11-204ENST00000530660 S100A7AQ86SG5 101 aa12.24□□□□□ -0.45
PCF11-204ENST00000530660 ATP5SQ99766 215 aa12.24□□□□□ -0.45
PCF11-204ENST00000530660 PILRAQ9UKJ1 303 aa12.24□□□□□ -0.45
PCF11-204ENST00000530660 CYR61O00622 381 aa12.24□□□□□ -0.45
PCF11-204ENST00000530660 TNFRSF10CO14798 259 aa12.24□□□□□ -0.45
PCF11-204ENST00000530660 HMGB3O15347 200 aaKnown RBP12.24□□□□□ -0.45
PCF11-204ENST00000530660 SERF1AO75920 110 aa12.24□□□□□ -0.45
PCF11-204ENST00000530660 TYMSP04818 313 aa12.24□□□□□ -0.45
PCF11-204ENST00000530660 ADMP35318 185 aa12.24□□□□□ -0.45
PCF11-204ENST00000530660 SLC6A8P48029 635 aa12.24□□□□□ -0.45
PCF11-204ENST00000530660 TPPP2P59282 170 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms