RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 CACNA1AO00555 2505 aa13.05□□□□□ -0.32
CCDC90B-213ENST00000529611 KIR2DS1A0A191URI9 304 aa13.05□□□□□ -0.32
CCDC90B-213ENST00000529611 ZSCAN5BA6NJL1 495 aa13.05□□□□□ -0.32
CCDC90B-213ENST00000529611 TRDCB7Z8K6 153 aa13.05□□□□□ -0.32
CCDC90B-213ENST00000529611 ATP6V1G1O75348 118 aa13.05□□□□□ -0.32
CCDC90B-213ENST00000529611 CD8AP01732 235 aa13.05□□□□□ -0.32
CCDC90B-213ENST00000529611 ZNF728P0DKX0 622 aa13.05□□□□□ -0.32
CCDC90B-213ENST00000529611 NFYAP23511 347 aaPredicted RBP13.05□□□□□ -0.32
CCDC90B-213ENST00000529611 KIR2DS4P43632 304 aa13.05□□□□□ -0.32
CCDC90B-213ENST00000529611 RPS23P62266 143 aaKnown RBP13.05□□□□□ -0.32
CCDC90B-213ENST00000529611 KIR2DS1Q14954 304 aa13.05□□□□□ -0.32
CCDC90B-213ENST00000529611 HERPUD1Q15011 391 aa13.05□□□□□ -0.32
CCDC90B-213ENST00000529611 ANKRD55Q3KP44 614 aa13.05□□□□□ -0.32
CCDC90B-213ENST00000529611 PRR13Q9NZ81 148 aa13.05□□□□□ -0.32
CCDC90B-213ENST00000529611 MEMO1Q9Y316 297 aa13.05□□□□□ -0.32
CCDC90B-213ENST00000529611 A0A0B4J2A0 478 aa13.04□□□□□ -0.32
CCDC90B-213ENST00000529611 TRGV8A0A0C4DH27 118 aa13.04□□□□□ -0.32
CCDC90B-213ENST00000529611 SH2D1BO14796 132 aa13.04□□□□□ -0.32
CCDC90B-213ENST00000529611 THBDP07204 575 aa13.04□□□□□ -0.32
CCDC90B-213ENST00000529611 AADACP22760 399 aa13.04□□□□□ -0.32
CCDC90B-213ENST00000529611 CD200P41217 278 aa13.04□□□□□ -0.32
CCDC90B-213ENST00000529611 ZNF81P51508 661 aa13.04□□□□□ -0.32
CCDC90B-213ENST00000529611 MZT1Q08AG7 82 aa13.04□□□□□ -0.32
CCDC90B-213ENST00000529611 SHEQ5VZ18 495 aa13.04□□□□□ -0.32
CCDC90B-213ENST00000529611 PLPPR1Q8TBJ4 325 aa13.04□□□□□ -0.32
CCDC90B-213ENST00000529611 TREM2Q9NZC2 230 aa13.04□□□□□ -0.32
CCDC90B-213ENST00000529611 SHPKQ9UHJ6 478 aa13.04□□□□□ -0.32
CCDC90B-213ENST00000529611 CHD3Q12873 2000 aaKnown RBP13.04□□□□□ -0.32
CCDC90B-213ENST00000529611 ADGRG4Q8IZF6 3080 aa13.04□□□□□ -0.32
CCDC90B-213ENST00000529611 TRAV14DV4A0A0A6YYC5 116 aa13.03□□□□□ -0.32
CCDC90B-213ENST00000529611 IGKV1-6A0A0C4DH72 117 aa13.03□□□□□ -0.32
CCDC90B-213ENST00000529611 CRYM-AS1A6NIL9 109 aa13.03□□□□□ -0.32
CCDC90B-213ENST00000529611 PTBP3O95758 552 aaKnown RBP13.03□□□□□ -0.32
CCDC90B-213ENST00000529611 HAND1O96004 215 aa13.03□□□□□ -0.32
CCDC90B-213ENST00000529611 PPYP01298 95 aa13.03□□□□□ -0.32
CCDC90B-213ENST00000529611 RCC1P18754 421 aaPredicted RBP13.03□□□□□ -0.32
CCDC90B-213ENST00000529611 SSTR2P30874 369 aa13.03□□□□□ -0.32
CCDC90B-213ENST00000529611 MDH2P40926 338 aaKnown RBP13.03□□□□□ -0.32
CCDC90B-213ENST00000529611 CEBPDP49716 269 aaPredicted RBP13.03□□□□□ -0.32
CCDC90B-213ENST00000529611 UCP3P55916 312 aa13.03□□□□□ -0.32
CCDC90B-213ENST00000529611 SORDQ00796 357 aa13.03□□□□□ -0.32
CCDC90B-213ENST00000529611 FIP1L1Q6UN15 594 aaKnown RBP13.03□□□□□ -0.32
CCDC90B-213ENST00000529611 TMEM108Q6UXF1 575 aa13.03□□□□□ -0.32
CCDC90B-213ENST00000529611 UNQ6494/PRO21346Q6UXR6 183 aa13.03□□□□□ -0.32
CCDC90B-213ENST00000529611 ACP7Q6ZNF0 438 aa13.03□□□□□ -0.32
CCDC90B-213ENST00000529611 WFDC8Q8IUA0 241 aa13.03□□□□□ -0.32
CCDC90B-213ENST00000529611 ZCCHC14Q8WYQ9 949 aaKnown RBP13.03□□□□□ -0.32
CCDC90B-213ENST00000529611 ELMOD3Q96FG2 381 aa13.03□□□□□ -0.32
CCDC90B-213ENST00000529611 SEC22AQ96IW7 307 aa13.03□□□□□ -0.32
CCDC90B-213ENST00000529611 PDCD10Q9BUL8 212 aa13.03□□□□□ -0.32
CCDC90B-213ENST00000529611 OR14J1Q9UGF5 321 aa13.03□□□□□ -0.32
CCDC90B-213ENST00000529611 ICE1Q9Y2F5 2266 aa13.03□□□□□ -0.32
CCDC90B-213ENST00000529611 FAM25EA8MYX2 175 aa13.03□□□□□ -0.32
CCDC90B-213ENST00000529611 BET1O15155 118 aa13.03□□□□□ -0.32
CCDC90B-213ENST00000529611 TSC22D2O75157 780 aa13.03□□□□□ -0.32
CCDC90B-213ENST00000529611 CXCL2P19875 107 aa13.03□□□□□ -0.32
CCDC90B-213ENST00000529611 PIGPP57054 158 aa13.03□□□□□ -0.32
CCDC90B-213ENST00000529611 ZNF497Q6ZNH5 498 aa13.03□□□□□ -0.32
CCDC90B-213ENST00000529611 GAPTQ8N292 157 aa13.03□□□□□ -0.32
CCDC90B-213ENST00000529611 OR5T2Q8NGG2 359 aa13.03□□□□□ -0.32
CCDC90B-213ENST00000529611 COQ8AQ8NI60 647 aa13.03□□□□□ -0.32
CCDC90B-213ENST00000529611 MRPL37Q9BZE1 423 aaKnown RBP13.03□□□□□ -0.32
CCDC90B-213ENST00000529611 C1orf123Q9NWV4 160 aa13.03□□□□□ -0.32
CCDC90B-213ENST00000529611 FXYD6-FXYD2A0A087WZ82 144 aa13.02□□□□□ -0.32
CCDC90B-213ENST00000529611 hCG_1807616A0A1W2PRN6 198 aa13.02□□□□□ -0.32
CCDC90B-213ENST00000529611 RFPL4AA6NLU0 287 aa13.02□□□□□ -0.32
CCDC90B-213ENST00000529611 HMSDA8MTL9 139 aa13.02□□□□□ -0.32
CCDC90B-213ENST00000529611 RFPL4AL1F8VTS6 287 aa13.02□□□□□ -0.32
CCDC90B-213ENST00000529611 TK1P04183 234 aa13.02□□□□□ -0.32
CCDC90B-213ENST00000529611 PTAFRP25105 342 aa13.02□□□□□ -0.32
CCDC90B-213ENST00000529611 SERPINF1P36955 418 aa13.02□□□□□ -0.32
CCDC90B-213ENST00000529611 RBMXP38159 391 aaKnown RBP13.02□□□□□ -0.32
CCDC90B-213ENST00000529611 CA7P43166 264 aa13.02□□□□□ -0.32
CCDC90B-213ENST00000529611 HERV-K104P61576 105 aa13.02□□□□□ -0.32
CCDC90B-213ENST00000529611 SEC61A1P61619 476 aaKnown RBP13.02□□□□□ -0.32
CCDC90B-213ENST00000529611 SGPP2Q8IWX5 399 aa13.02□□□□□ -0.32
CCDC90B-213ENST00000529611 ST6GALNAC3Q8NDV1 305 aa13.02□□□□□ -0.32
CCDC90B-213ENST00000529611 NUP37Q8NFH4 326 aa13.02□□□□□ -0.32
CCDC90B-213ENST00000529611 PIK3IP1Q96FE7 263 aa13.02□□□□□ -0.32
CCDC90B-213ENST00000529611 HEXA-AS1Q9H8Q6 139 aa13.02□□□□□ -0.32
CCDC90B-213ENST00000529611 RAB18Q9NP72 206 aa13.02□□□□□ -0.32
CCDC90B-213ENST00000529611 DPRXA6NFQ7 191 aa13.01□□□□□ -0.33
CCDC90B-213ENST00000529611 PSPNO60542 156 aa13.01□□□□□ -0.33
CCDC90B-213ENST00000529611 ADAP1O75689 374 aa13.01□□□□□ -0.33
CCDC90B-213ENST00000529611 IFNA2P01563 188 aa13.01□□□□□ -0.33
CCDC90B-213ENST00000529611 CTXN2P0C2S0 81 aa13.01□□□□□ -0.33
CCDC90B-213ENST00000529611 LMO1P25800 156 aa13.01□□□□□ -0.33
CCDC90B-213ENST00000529611 CASP6P55212 293 aa13.01□□□□□ -0.33
CCDC90B-213ENST00000529611 HLA-DRB3P79483 266 aa13.01□□□□□ -0.33
CCDC90B-213ENST00000529611 ATXN7L3Q14CW9 347 aaPredicted RBP13.01□□□□□ -0.33
CCDC90B-213ENST00000529611 SPRNQ5BIV9 151 aa13.01□□□□□ -0.33
CCDC90B-213ENST00000529611 SLC38A6Q8IZM9 456 aa13.01□□□□□ -0.33
CCDC90B-213ENST00000529611 OR2V2Q96R30 315 aa13.01□□□□□ -0.33
CCDC90B-213ENST00000529611 SLC2A9Q9NRM0 540 aa13.01□□□□□ -0.33
CCDC90B-213ENST00000529611 RASL12Q9NYN1 266 aa13.01□□□□□ -0.33
CCDC90B-213ENST00000529611 TAAR3PQ9P1P4 343 aa13.01□□□□□ -0.33
CCDC90B-213ENST00000529611 NBASA2RRP1 2371 aa13.01□□□□□ -0.33
CCDC90B-213ENST00000529611 TEX13DA0A0J9YY54 714 aaPredicted RBP13.01□□□□□ -0.33
CCDC90B-213ENST00000529611 POM121CA8CG34 1229 aa13.01□□□□□ -0.33
CCDC90B-213ENST00000529611 ABCD4O14678 606 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms