RNA–Protein interactions for RNA: ENST00000528086.5

CD44-227, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-227ENST00000528086 HABP2Q14520 560 aaPredicted RBP8.57□□□□□ -1.04
CD44-227ENST00000528086 IL13RA2Q14627 380 aa8.57□□□□□ -1.04
CD44-227ENST00000528086 SSX2Q16385 188 aa8.57□□□□□ -1.04
CD44-227ENST00000528086 YIF1BQ5BJH7 314 aa8.57□□□□□ -1.04
CD44-227ENST00000528086 NHLRC3Q5JS37 347 aa8.57□□□□□ -1.04
CD44-227ENST00000528086 DDI2Q5TDH0 399 aa8.57□□□□□ -1.04
CD44-227ENST00000528086 RNLSQ5VYX0 342 aa8.57□□□□□ -1.04
CD44-227ENST00000528086 TMEM219Q86XT9 240 aa8.57□□□□□ -1.04
CD44-227ENST00000528086 OR4D6Q8NGJ1 314 aa8.57□□□□□ -1.04
CD44-227ENST00000528086 WIPF2Q8TF74 440 aaPredicted RBP8.57□□□□□ -1.04
CD44-227ENST00000528086 ZNF184Q99676 751 aaPredicted RBP8.57□□□□□ -1.04
CD44-227ENST00000528086 DUSP21Q9H596 190 aa8.57□□□□□ -1.04
CD44-227ENST00000528086 ZNF702PQ9H963 129 aa8.57□□□□□ -1.04
CD44-227ENST00000528086 KIF25Q9UIL4 384 aa8.57□□□□□ -1.04
CD44-227ENST00000528086 TBL2Q9Y4P3 447 aaKnown RBP8.57□□□□□ -1.04
CD44-227ENST00000528086 A0A087X0M5 115 aa8.56□□□□□ -1.04
CD44-227ENST00000528086 A0A1B0GUS0 222 aa8.56□□□□□ -1.04
CD44-227ENST00000528086 A0A1B0GX30 115 aa8.56□□□□□ -1.04
CD44-227ENST00000528086 A0A1W2PPH5 198 aa8.56□□□□□ -1.04
CD44-227ENST00000528086 NPIPB11E5RHQ5 1161 aa8.56□□□□□ -1.04
CD44-227ENST00000528086 GEMIN2O14893 280 aaKnown RBP8.56□□□□□ -1.04
CD44-227ENST00000528086 SC5DO75845 299 aa8.56□□□□□ -1.04
CD44-227ENST00000528086 HTR3BO95264 441 aa8.56□□□□□ -1.04
CD44-227ENST00000528086 CD37P11049 281 aa8.56□□□□□ -1.04
CD44-227ENST00000528086 CELP19835 753 aa8.56□□□□□ -1.04
CD44-227ENST00000528086 CD24P25063 80 aa8.56□□□□□ -1.04
CD44-227ENST00000528086 ZNF93P35789 620 aaPredicted RBP8.56□□□□□ -1.04
CD44-227ENST00000528086 KIR2DS4P43632 304 aa8.56□□□□□ -1.04
CD44-227ENST00000528086 WNT4P56705 351 aa8.56□□□□□ -1.04
CD44-227ENST00000528086 RBM11P57052 281 aaKnown RBP8.56□□□□□ -1.04
CD44-227ENST00000528086 KRBOX4Q5JUW0 171 aa8.56□□□□□ -1.04
CD44-227ENST00000528086 SIGIRRQ6IA17 410 aa8.56□□□□□ -1.04
CD44-227ENST00000528086 DHRS7BQ6IAN0 325 aaPredicted RBP8.56□□□□□ -1.04
CD44-227ENST00000528086 BRICD5Q6PL45 260 aa8.56□□□□□ -1.04
CD44-227ENST00000528086 C5orf24Q7Z6I8 188 aa8.56□□□□□ -1.04
CD44-227ENST00000528086 RTN4RL2Q86UN3 420 aa8.56□□□□□ -1.04
CD44-227ENST00000528086 SUMF2Q8NBJ7 301 aa8.56□□□□□ -1.04
CD44-227ENST00000528086 CHST4Q8NCG5 386 aa8.56□□□□□ -1.04
CD44-227ENST00000528086 TMEM104Q8NE00 496 aa8.56□□□□□ -1.04
CD44-227ENST00000528086 OR13D1Q8NGV5 346 aa8.56□□□□□ -1.04
CD44-227ENST00000528086 FOXRED1Q96CU9 486 aaPredicted RBP8.56□□□□□ -1.04
CD44-227ENST00000528086 MALSU1Q96EH3 234 aa8.56□□□□□ -1.04
CD44-227ENST00000528086 KIRREL1Q96J84 757 aa8.56□□□□□ -1.04
CD44-227ENST00000528086 MYCBPQ99417 103 aaPredicted RBP8.56□□□□□ -1.04
CD44-227ENST00000528086 CDCA4Q9BXL8 241 aa8.56□□□□□ -1.04
CD44-227ENST00000528086 IFT22Q9H7X7 185 aa8.56□□□□□ -1.04
CD44-227ENST00000528086 SERTAD4Q9NUC0 356 aa8.56□□□□□ -1.04
CD44-227ENST00000528086 TAS2R3Q9NYW6 316 aa8.56□□□□□ -1.04
CD44-227ENST00000528086 FBLN5Q9UBX5 448 aa8.56□□□□□ -1.04
CD44-227ENST00000528086 FOXJ3Q9UPW0 622 aa8.56□□□□□ -1.04
CD44-227ENST00000528086 TCF19Q9Y242 345 aa8.56□□□□□ -1.04
CD44-227ENST00000528086 HILPDAQ9Y5L2 63 aa8.56□□□□□ -1.04
CD44-227ENST00000528086 TET2Q6N021 2002 aaPredicted RBP8.55□□□□□ -1.04
CD44-227ENST00000528086 hCG_1809904A0A1W2PP81 198 aa8.55□□□□□ -1.04
CD44-227ENST00000528086 A0A1W2PPE2 198 aa8.55□□□□□ -1.04
CD44-227ENST00000528086 A0A1W2PR64 198 aa8.55□□□□□ -1.04
CD44-227ENST00000528086 A0A1W2PRV1 198 aa8.55□□□□□ -1.04
CD44-227ENST00000528086 PTGES3LE9PB15 166 aa8.55□□□□□ -1.04
CD44-227ENST00000528086 AMY1AP04745 511 aa8.55□□□□□ -1.04
CD44-227ENST00000528086 AMY2AP04746 511 aa8.55□□□□□ -1.04
CD44-227ENST00000528086 CD2P06729 351 aa8.55□□□□□ -1.04
CD44-227ENST00000528086 OCMP0CE72 109 aaPredicted RBP8.55□□□□□ -1.04
CD44-227ENST00000528086 MYF6P23409 242 aa8.55□□□□□ -1.04
CD44-227ENST00000528086 VHLP40337 213 aa8.55□□□□□ -1.04
CD44-227ENST00000528086 DYNLT3P51808 116 aa8.55□□□□□ -1.04
CD44-227ENST00000528086 BLCAPP62952 87 aa8.55□□□□□ -1.04
CD44-227ENST00000528086 BDH1Q02338 343 aa8.55□□□□□ -1.04
CD44-227ENST00000528086 GABPB1Q06547 395 aaPredicted RBP8.55□□□□□ -1.04
CD44-227ENST00000528086 DYNC1I2Q13409 638 aaKnown RBP8.55□□□□□ -1.04
CD44-227ENST00000528086 RIPK1Q13546 671 aa8.55□□□□□ -1.04
CD44-227ENST00000528086 DIAPH2-AS1Q14236 149 aa8.55□□□□□ -1.04
CD44-227ENST00000528086 FAM189A2Q15884 450 aa8.55□□□□□ -1.04
CD44-227ENST00000528086 PAN3Q58A45 887 aaKnown RBP8.55□□□□□ -1.04
CD44-227ENST00000528086 MINOS1Q5TGZ0 78 aa8.55□□□□□ -1.04
CD44-227ENST00000528086 TMEM91Q6ZNR0 172 aa8.55□□□□□ -1.04
CD44-227ENST00000528086 LRRTM1Q86UE6 522 aa8.55□□□□□ -1.04
CD44-227ENST00000528086 Q8N2B8 174 aa8.55□□□□□ -1.04
CD44-227ENST00000528086 ABHD12Q8N2K0 398 aa8.55□□□□□ -1.04
CD44-227ENST00000528086 STX19Q8N4C7 294 aa8.55□□□□□ -1.04
CD44-227ENST00000528086 LEAP2Q969E1 77 aa8.55□□□□□ -1.04
CD44-227ENST00000528086 MUL1Q969V5 352 aa8.55□□□□□ -1.04
CD44-227ENST00000528086 RBMXL1Q96E39 390 aaKnown RBP8.55□□□□□ -1.04
CD44-227ENST00000528086 GPER1Q99527 375 aa8.55□□□□□ -1.04
CD44-227ENST00000528086 GFI1Q99684 422 aa8.55□□□□□ -1.04
CD44-227ENST00000528086 CLEC7AQ9BXN2 247 aa8.55□□□□□ -1.04
CD44-227ENST00000528086 FAM192AQ9GZU8 254 aa8.55□□□□□ -1.04
CD44-227ENST00000528086 NCOR1P1Q9H4R4 102 aa8.55□□□□□ -1.04
CD44-227ENST00000528086 RCC2Q9P258 522 aaKnown RBP8.55□□□□□ -1.04
CD44-227ENST00000528086 ING4Q9UNL4 249 aa8.55□□□□□ -1.04
CD44-227ENST00000528086 ST3GAL6Q9Y274 331 aa8.55□□□□□ -1.04
CD44-227ENST00000528086 MINOS1-NBL1R4GNA1 71 aa8.55□□□□□ -1.04
CD44-227ENST00000528086 DNAH3Q8TD57 4116 aa8.55□□□□□ -1.04
CD44-227ENST00000528086 TRGV10A0A0A0MS01 117 aa8.54□□□□□ -1.04
CD44-227ENST00000528086 KBTBD11-OT1A0A1B0GTJ5 212 aa8.54□□□□□ -1.04
CD44-227ENST00000528086 ERICH4A6NGS2 130 aa8.54□□□□□ -1.04
CD44-227ENST00000528086 C15orf65H3BRN8 121 aa8.54□□□□□ -1.04
CD44-227ENST00000528086 KCNAB3O43448 404 aa8.54□□□□□ -1.04
CD44-227ENST00000528086 TSPAN15O95858 294 aa8.54□□□□□ -1.04
CD44-227ENST00000528086 IGHV3-7P01780 117 aa8.54□□□□□ -1.04
CD44-227ENST00000528086 SERPINA2P20848 420 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms