RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 OR5AK2Q8NH90 309 aa17.84■□□□□ 0.45
TRAPPC4-208ENST00000527680 TSEN15Q8WW01 171 aaKnown RBP17.84■□□□□ 0.45
TRAPPC4-208ENST00000527680 GPER1Q99527 375 aa17.84■□□□□ 0.45
TRAPPC4-208ENST00000527680 BARHL1Q9BZE3 327 aa17.84■□□□□ 0.45
TRAPPC4-208ENST00000527680 ISG20L2Q9H9L3 353 aaKnown RBP17.84■□□□□ 0.45
TRAPPC4-208ENST00000527680 DHDHQ9UQ10 334 aa17.84■□□□□ 0.45
TRAPPC4-208ENST00000527680 KBTBD11-OT1A0A1B0GTJ5 212 aa17.83■□□□□ 0.44
TRAPPC4-208ENST00000527680 OOSP1A8MZH6 123 aa17.83■□□□□ 0.44
TRAPPC4-208ENST00000527680 IGHV3-7P01780 117 aa17.83■□□□□ 0.44
TRAPPC4-208ENST00000527680 ALDH3A2P51648 485 aa17.83■□□□□ 0.44
TRAPPC4-208ENST00000527680 ZNF691Q5VV52 312 aa17.83■□□□□ 0.44
TRAPPC4-208ENST00000527680 LPCAT4Q643R3 524 aa17.83■□□□□ 0.44
TRAPPC4-208ENST00000527680 C10orf99Q6UWK7 81 aa17.83■□□□□ 0.44
TRAPPC4-208ENST00000527680 TOMM40LQ969M1 308 aa17.83■□□□□ 0.44
TRAPPC4-208ENST00000527680 AMBNQ9NP70 447 aa17.83■□□□□ 0.44
TRAPPC4-208ENST00000527680 ZNF281Q9Y2X9 895 aa17.83■□□□□ 0.44
TRAPPC4-208ENST00000527680 A0A087X0M5 115 aa17.82■□□□□ 0.44
TRAPPC4-208ENST00000527680 A0A1B0GX30 115 aa17.82■□□□□ 0.44
TRAPPC4-208ENST00000527680 TMEM212A6NML5 194 aa17.82■□□□□ 0.44
TRAPPC4-208ENST00000527680 LY6LH3BQJ8 138 aa17.82■□□□□ 0.44
TRAPPC4-208ENST00000527680 ZFPL1O95159 310 aa17.82■□□□□ 0.44
TRAPPC4-208ENST00000527680 FADS2O95864 444 aaKnown RBP17.82■□□□□ 0.44
TRAPPC4-208ENST00000527680 AMY1AP04745 511 aa17.82■□□□□ 0.44
TRAPPC4-208ENST00000527680 AMY2AP04746 511 aa17.82■□□□□ 0.44
TRAPPC4-208ENST00000527680 ZP1P60852 638 aa17.82■□□□□ 0.44
TRAPPC4-208ENST00000527680 LTC4SQ16873 150 aa17.82■□□□□ 0.44
TRAPPC4-208ENST00000527680 DEFB121Q5J5C9 76 aa17.82■□□□□ 0.44
TRAPPC4-208ENST00000527680 UTF1Q5T230 341 aa17.82■□□□□ 0.44
TRAPPC4-208ENST00000527680 SYS1Q8N2H4 156 aa17.82■□□□□ 0.44
TRAPPC4-208ENST00000527680 PARP16Q8N5Y8 322 aa17.82■□□□□ 0.44
TRAPPC4-208ENST00000527680 KIRREL1Q96J84 757 aa17.82■□□□□ 0.44
TRAPPC4-208ENST00000527680 Q96MT0 163 aa17.82■□□□□ 0.44
TRAPPC4-208ENST00000527680 PDCD1LG2Q9BQ51 273 aa17.82■□□□□ 0.44
TRAPPC4-208ENST00000527680 KIF25Q9UIL4 384 aa17.82■□□□□ 0.44
TRAPPC4-208ENST00000527680 AMMECR1Q9Y4X0 333 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC4-208ENST00000527680 GBX2P52951 348 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC4-208ENST00000527680 HES1Q14469 280 aa17.81■□□□□ 0.44
TRAPPC4-208ENST00000527680 RSU1Q15404 277 aa17.81■□□□□ 0.44
TRAPPC4-208ENST00000527680 ZSCAN26Q16670 478 aa17.81■□□□□ 0.44
TRAPPC4-208ENST00000527680 CBR4Q8N4T8 237 aa17.81■□□□□ 0.44
TRAPPC4-208ENST00000527680 OR51T1Q8NGJ9 327 aa17.81■□□□□ 0.44
TRAPPC4-208ENST00000527680 RFESDQ8TAC1 157 aa17.81■□□□□ 0.44
TRAPPC4-208ENST00000527680 CNIH3Q8TBE1 160 aa17.81■□□□□ 0.44
TRAPPC4-208ENST00000527680 LEAP2Q969E1 77 aa17.81■□□□□ 0.44
TRAPPC4-208ENST00000527680 CPNE2Q96FN4 548 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC4-208ENST00000527680 FAM192AQ9GZU8 254 aa17.81■□□□□ 0.44
TRAPPC4-208ENST00000527680 PCDHB16Q9NRJ7 776 aa17.81■□□□□ 0.44
TRAPPC4-208ENST00000527680 CALYQ9NYX4 217 aa17.81■□□□□ 0.44
TRAPPC4-208ENST00000527680 IDI2-AS1Q9NZ38 188 aa17.81■□□□□ 0.44
TRAPPC4-208ENST00000527680 PSMB11A5LHX3 300 aa17.8■□□□□ 0.44
TRAPPC4-208ENST00000527680 J3QR06 171 aa17.8■□□□□ 0.44
TRAPPC4-208ENST00000527680 CCDC159P0C7I6 412 aa17.8■□□□□ 0.44
TRAPPC4-208ENST00000527680 RAB3AP20336 220 aa17.8■□□□□ 0.44
TRAPPC4-208ENST00000527680 MRPL28Q13084 256 aaKnown RBP17.8■□□□□ 0.44
TRAPPC4-208ENST00000527680 OR13A1Q8NGR1 328 aa17.8■□□□□ 0.44
TRAPPC4-208ENST00000527680 TNFAIP8L1Q8WVP5 186 aa17.8■□□□□ 0.44
TRAPPC4-208ENST00000527680 RCC1LQ96I51 464 aaKnown RBP17.8■□□□□ 0.44
TRAPPC4-208ENST00000527680 ERVK13-1Q9NX77 482 aa17.8■□□□□ 0.44
TRAPPC4-208ENST00000527680 MOB4Q9Y3A3 225 aa17.8■□□□□ 0.44
TRAPPC4-208ENST00000527680 HSPE1-MOB4S4R3N1 261 aa17.8■□□□□ 0.44
TRAPPC4-208ENST00000527680 E9PI62 339 aa17.79■□□□□ 0.44
TRAPPC4-208ENST00000527680 MPZL2O60487 215 aa17.79■□□□□ 0.44
TRAPPC4-208ENST00000527680 SNRNP70P08621 437 aaKnown RBP17.79■□□□□ 0.44
TRAPPC4-208ENST00000527680 CGB3P0DN86 165 aa17.79■□□□□ 0.44
TRAPPC4-208ENST00000527680 CGB7P0DN87 165 aa17.79■□□□□ 0.44
TRAPPC4-208ENST00000527680 HNF4GQ14541 408 aa17.79■□□□□ 0.44
TRAPPC4-208ENST00000527680 ELP2Q6IA86 826 aa17.79■□□□□ 0.44
TRAPPC4-208ENST00000527680 THNSL2Q86YJ6 484 aa17.79■□□□□ 0.44
TRAPPC4-208ENST00000527680 OSR2Q8N2R0 312 aa17.79■□□□□ 0.44
TRAPPC4-208ENST00000527680 PXT1Q8NFP0 134 aa17.79■□□□□ 0.44
TRAPPC4-208ENST00000527680 OR56B4Q8NH76 319 aa17.79■□□□□ 0.44
TRAPPC4-208ENST00000527680 INPP5EQ9NRR6 644 aa17.79■□□□□ 0.44
TRAPPC4-208ENST00000527680 PSG11Q9UQ72 335 aa17.79■□□□□ 0.44
TRAPPC4-208ENST00000527680 TRAV24A0A0B4J272 114 aa17.78■□□□□ 0.44
TRAPPC4-208ENST00000527680 HTR3BO95264 441 aa17.78■□□□□ 0.44
TRAPPC4-208ENST00000527680 DUS4LO95620 317 aaKnown RBP17.78■□□□□ 0.44
TRAPPC4-208ENST00000527680 TMEM11P17152 192 aa17.78■□□□□ 0.44
TRAPPC4-208ENST00000527680 SOX2P48431 317 aa17.78■□□□□ 0.44
TRAPPC4-208ENST00000527680 GNG10P50151 68 aa17.78■□□□□ 0.44
TRAPPC4-208ENST00000527680 MADCAM1Q13477 382 aa17.78■□□□□ 0.44
TRAPPC4-208ENST00000527680 ZFP1Q6P2D0 407 aa17.78■□□□□ 0.44
TRAPPC4-208ENST00000527680 ZNF329Q86UD4 541 aa17.78■□□□□ 0.44
TRAPPC4-208ENST00000527680 DRAM1Q8N682 238 aa17.78■□□□□ 0.44
TRAPPC4-208ENST00000527680 OR10K1Q8NGX5 313 aa17.78■□□□□ 0.44
TRAPPC4-208ENST00000527680 HAVCR2Q8TDQ0 301 aa17.78■□□□□ 0.44
TRAPPC4-208ENST00000527680 MRGPRDQ8TDS7 321 aa17.78■□□□□ 0.44
TRAPPC4-208ENST00000527680 ZNF649Q9BS31 505 aa17.78■□□□□ 0.44
TRAPPC4-208ENST00000527680 GABRB1P18505 474 aa17.77■□□□□ 0.44
TRAPPC4-208ENST00000527680 RAB40BQ12829 278 aa17.77■□□□□ 0.44
TRAPPC4-208ENST00000527680 OR10X1Q8NGY0 326 aa17.77■□□□□ 0.44
TRAPPC4-208ENST00000527680 RHOXF1Q8NHV9 184 aa17.77■□□□□ 0.44
TRAPPC4-208ENST00000527680 NCOR1P1Q9H4R4 102 aa17.77■□□□□ 0.44
TRAPPC4-208ENST00000527680 FAM118AQ9NWS6 357 aa17.77■□□□□ 0.44
TRAPPC4-208ENST00000527680 ING4Q9UNL4 249 aa17.77■□□□□ 0.44
TRAPPC4-208ENST00000527680 RPL36Q9Y3U8 105 aaKnown RBP17.77■□□□□ 0.44
TRAPPC4-208ENST00000527680 TRAV39A0A0B4J263 110 aa17.76■□□□□ 0.43
TRAPPC4-208ENST00000527680 FAM90A18PA6NE21 464 aa17.76■□□□□ 0.43
TRAPPC4-208ENST00000527680 FAM90A16PA6NEW6 464 aa17.76■□□□□ 0.43
TRAPPC4-208ENST00000527680 FAM90A20PA6NIJ5 464 aa17.76■□□□□ 0.43
TRAPPC4-208ENST00000527680 FAM90A9PA6NNJ1 464 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms