RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 RBM39Q14498 530 aaKnown RBP5.24□□□□□ -1.57
CD44-221ENST00000526000 CDK5R1Q15078 307 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 SPHARQ15513 63 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 GRK1Q15835 563 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 TP53I3Q53FA7 332 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 UTF1Q5T230 341 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 UBE2UQ5VVX9 321 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 C8orf86Q6ZUL3 223 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 SLC25A26Q70HW3 274 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 SSX6Q7RTT6 188 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 TCF23Q7RTU1 214 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 MRPL41Q8IXM3 137 aaKnown RBP5.24□□□□□ -1.57
CD44-221ENST00000526000 RDH10Q8IZV5 341 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 ABHD12Q8N2K0 398 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 MS4A15Q8N5U1 240 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 ZNF485Q8NCK3 441 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 TSPAN14Q8NG11 270 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 OR4X2Q8NGF9 303 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 PHYHIPQ92561 330 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 SMIM19Q96E16 107 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 RBMXL1Q96E39 390 aaKnown RBP5.24□□□□□ -1.57
CD44-221ENST00000526000 RCC1LQ96I51 464 aaKnown RBP5.24□□□□□ -1.57
CD44-221ENST00000526000 SNX22Q96L94 193 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 NOL4LQ96MY1 436 aaPredicted RBP5.24□□□□□ -1.57
CD44-221ENST00000526000 SLC25A33Q9BSK2 321 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 CCDC90BQ9GZT6 254 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 NEK6Q9HC98 313 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 PAK1IP1Q9NWT1 392 aaPredicted RBP5.24□□□□□ -1.57
CD44-221ENST00000526000 DPM3Q9P2X0 92 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 HHLA2Q9UM44 414 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 POLDIP2Q9Y2S7 368 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 LSM2Q9Y333 95 aaKnown RBP5.24□□□□□ -1.57
CD44-221ENST00000526000 SESN1Q9Y6P5 492 aa5.24□□□□□ -1.57
CD44-221ENST00000526000 TRBV2A0A0J9YWF9 115 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 hADV38S2A0JD32 116 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 MAGEA13PA6NCF6 341 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 OR4C45A6NMZ5 311 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 FAM90A22PA8MWA6 464 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 TOR1AO14656 332 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 SYT7O43581 403 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 PSPNO60542 156 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 HAND1O96004 215 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 SERPINA3P01011 423 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 AMY1AP04745 511 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 AMY2AP04746 511 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 ALDOBP05062 364 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 CD2P06729 351 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 GALP22466 123 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 NFYBP25208 207 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 MAPK3P27361 379 aaPredicted RBP5.23□□□□□ -1.57
CD44-221ENST00000526000 BRS3P32247 399 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 GLIPR1P48060 266 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 NPBWR2P48146 333 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 POU3F4P49335 361 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 ERVK11-1P61568 191 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 TPBGQ13641 420 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 UBE2V2Q15819 145 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 LTC4SQ16873 150 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 YIF1BQ5BJH7 314 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 MINOS1Q5TGZ0 78 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 DMKNQ6E0U4 476 aaPredicted RBP5.23□□□□□ -1.57
CD44-221ENST00000526000 LCNL1Q6ZST4 164 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 SPARTQ8N0X7 666 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 LINC00482Q8N8I6 264 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 OR4P4Q8NGL7 312 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 OR5AK2Q8NH90 309 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 PP6455Q8WZ26 134 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 DPF1Q92782 380 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 UFD1Q92890 307 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 EMG1Q92979 244 aaKnown RBP5.23□□□□□ -1.57
CD44-221ENST00000526000 RFT1Q96AA3 541 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 CEP19Q96LK0 163 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 PRR25Q96S07 402 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 B9D2Q9BPU9 175 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 CLEC7AQ9BXN2 247 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 TMEM133Q9H2Q1 129 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 HES4Q9HCC6 221 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 ACOT13Q9NPJ3 140 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 RBFOX1Q9NWB1 397 aaKnown RBP5.23□□□□□ -1.57
CD44-221ENST00000526000 CLEC2DQ9UHP7 191 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 SLC7A11Q9UPY5 501 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 GSTK1Q9Y2Q3 226 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 MINOS1-NBL1R4GNA1 71 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 V9GYS6 101 aa5.23□□□□□ -1.57
CD44-221ENST00000526000 LOC107986453A0A1B0GWG9 222 aa5.22□□□□□ -1.57
CD44-221ENST00000526000 PSMB11A5LHX3 300 aa5.22□□□□□ -1.57
CD44-221ENST00000526000 LINC01548A6NM66 108 aa5.22□□□□□ -1.57
CD44-221ENST00000526000 GATBO75879 557 aaKnown RBP5.22□□□□□ -1.57
CD44-221ENST00000526000 CPEP16870 476 aa5.22□□□□□ -1.57
CD44-221ENST00000526000 PRKACAP17612 351 aa5.22□□□□□ -1.57
CD44-221ENST00000526000 BCL3P20749 454 aa5.22□□□□□ -1.57
CD44-221ENST00000526000 CDK2P24941 298 aa5.22□□□□□ -1.57
CD44-221ENST00000526000 DYNLT3P51808 116 aa5.22□□□□□ -1.57
CD44-221ENST00000526000 AESQ08117 197 aa5.22□□□□□ -1.57
CD44-221ENST00000526000 HES1Q14469 280 aa5.22□□□□□ -1.57
CD44-221ENST00000526000 MED22Q15528 200 aa5.22□□□□□ -1.57
CD44-221ENST00000526000 TIMM50Q3ZCQ8 353 aa5.22□□□□□ -1.57
CD44-221ENST00000526000 SYT6Q5T7P8 510 aaPredicted RBP5.22□□□□□ -1.57
CD44-221ENST00000526000 OR2G6Q5TZ20 316 aa5.22□□□□□ -1.57
CD44-221ENST00000526000 TMEM42Q69YG0 159 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms