RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 FAM189A2Q15884 450 aa11.36□□□□□ -0.59
CAPN1-202ENST00000524773 SLC25A24Q6NUK1 477 aa11.36□□□□□ -0.59
CAPN1-202ENST00000524773 RASL10BQ96S79 203 aa11.36□□□□□ -0.59
CAPN1-202ENST00000524773 DECR2Q9NUI1 292 aa11.36□□□□□ -0.59
CAPN1-202ENST00000524773 PLA2G3Q9NZ20 509 aa11.36□□□□□ -0.59
CAPN1-202ENST00000524773 CRIM1Q9NZV1 1036 aa11.36□□□□□ -0.59
CAPN1-202ENST00000524773 NOSIPQ9Y314 301 aaKnown RBP11.36□□□□□ -0.59
CAPN1-202ENST00000524773 DSPP15924 2871 aaKnown RBP11.36□□□□□ -0.59
CAPN1-202ENST00000524773 A0A0G2JRQ6 117 aa11.35□□□□□ -0.59
CAPN1-202ENST00000524773 A0A1W2PR77 199 aa11.35□□□□□ -0.59
CAPN1-202ENST00000524773 PRSS8Q16651 343 aa11.35□□□□□ -0.59
CAPN1-202ENST00000524773 AKR1C8PQ5T2L2 129 aa11.35□□□□□ -0.59
CAPN1-202ENST00000524773 CYB5R2Q6BCY4 276 aa11.35□□□□□ -0.59
CAPN1-202ENST00000524773 C1QL4Q86Z23 238 aa11.35□□□□□ -0.59
CAPN1-202ENST00000524773 PLXDC1Q8IUK5 500 aa11.35□□□□□ -0.59
CAPN1-202ENST00000524773 PLPP5Q8NEB5 264 aa11.35□□□□□ -0.59
CAPN1-202ENST00000524773 CPNE4Q96A23 557 aaPredicted RBP11.35□□□□□ -0.59
CAPN1-202ENST00000524773 TVP23CQ96ET8 276 aa11.35□□□□□ -0.59
CAPN1-202ENST00000524773 FAM210BQ96KR6 192 aa11.35□□□□□ -0.59
CAPN1-202ENST00000524773 A0A087X0M5 115 aa11.35□□□□□ -0.59
CAPN1-202ENST00000524773 A0A1B0GX30 115 aa11.35□□□□□ -0.59
CAPN1-202ENST00000524773 SEC14L6B5MCN3 397 aa11.35□□□□□ -0.59
CAPN1-202ENST00000524773 DHHO43323 396 aa11.35□□□□□ -0.59
CAPN1-202ENST00000524773 GALR2O43603 387 aaPredicted RBP11.35□□□□□ -0.59
CAPN1-202ENST00000524773 DUX1O43812 170 aa11.35□□□□□ -0.59
CAPN1-202ENST00000524773 RBP2P50120 134 aa11.35□□□□□ -0.59
CAPN1-202ENST00000524773 SHBQ15464 509 aa11.35□□□□□ -0.59
CAPN1-202ENST00000524773 BEND4Q6ZU67 534 aa11.35□□□□□ -0.59
CAPN1-202ENST00000524773 SLC25A26Q70HW3 274 aa11.35□□□□□ -0.59
CAPN1-202ENST00000524773 OSR2Q8N2R0 312 aa11.35□□□□□ -0.59
CAPN1-202ENST00000524773 SLC25A45Q8N413 288 aa11.35□□□□□ -0.59
CAPN1-202ENST00000524773 CLDND2Q8NHS1 167 aa11.35□□□□□ -0.59
CAPN1-202ENST00000524773 CA5BP1Q8WTZ4 195 aa11.35□□□□□ -0.59
CAPN1-202ENST00000524773 MOB3AQ96BX8 217 aa11.35□□□□□ -0.59
CAPN1-202ENST00000524773 FSCN3Q9NQT6 498 aa11.35□□□□□ -0.59
CAPN1-202ENST00000524773 CCL28Q9NRJ3 127 aa11.35□□□□□ -0.59
CAPN1-202ENST00000524773 TLX3O43711 291 aaPredicted RBP11.34□□□□□ -0.59
CAPN1-202ENST00000524773 NRASP01111 189 aa11.34□□□□□ -0.59
CAPN1-202ENST00000524773 HIST1H1BP16401 226 aaKnown RBP11.34□□□□□ -0.59
CAPN1-202ENST00000524773 APLNRP35414 380 aa11.34□□□□□ -0.59
CAPN1-202ENST00000524773 RPS16P62249 146 aaKnown RBP11.34□□□□□ -0.59
CAPN1-202ENST00000524773 ZNF92Q03936 586 aa11.34□□□□□ -0.59
CAPN1-202ENST00000524773 PLCXD3Q63HM9 321 aa11.34□□□□□ -0.59
CAPN1-202ENST00000524773 OR51H1Q8NH63 302 aa11.34□□□□□ -0.59
CAPN1-202ENST00000524773 SPOCK3Q9BQ16 436 aa11.34□□□□□ -0.59
CAPN1-202ENST00000524773 ZNF286AQ9HBT8 521 aa11.34□□□□□ -0.59
CAPN1-202ENST00000524773 A0A0U1RQV5 110 aa11.34□□□□□ -0.59
CAPN1-202ENST00000524773 OR5H1A6NKK0 313 aa11.34□□□□□ -0.59
CAPN1-202ENST00000524773 TRDCB7Z8K6 153 aa11.34□□□□□ -0.59
CAPN1-202ENST00000524773 IAPPP10997 89 aa11.34□□□□□ -0.59
CAPN1-202ENST00000524773 CD200P41217 278 aa11.34□□□□□ -0.59
CAPN1-202ENST00000524773 MRPS34P82930 218 aaKnown RBP11.34□□□□□ -0.59
CAPN1-202ENST00000524773 DAZAP2Q15038 168 aaPredicted RBP11.34□□□□□ -0.59
CAPN1-202ENST00000524773 OR1K1Q8NGR3 316 aa11.34□□□□□ -0.59
CAPN1-202ENST00000524773 MISP3Q96FF7 219 aa11.34□□□□□ -0.59
CAPN1-202ENST00000524773 PACRGQ96M98 296 aaPredicted RBP11.34□□□□□ -0.59
CAPN1-202ENST00000524773 SYT3Q9BQG1 590 aa11.34□□□□□ -0.59
CAPN1-202ENST00000524773 ZNF16P17020 682 aaPredicted RBP11.34□□□□□ -0.59
CAPN1-202ENST00000524773 GLIPR1P48060 266 aa11.34□□□□□ -0.59
CAPN1-202ENST00000524773 HLA-BQ31612 363 aa11.34□□□□□ -0.59
CAPN1-202ENST00000524773 SELENOHQ8IZQ5 122 aaKnown RBP11.34□□□□□ -0.59
CAPN1-202ENST00000524773 NEK7Q8TDX7 302 aa11.34□□□□□ -0.59
CAPN1-202ENST00000524773 DEFB126Q9BYW3 111 aa11.34□□□□□ -0.59
CAPN1-202ENST00000524773 PISDQ9UG56 409 aa11.34□□□□□ -0.59
CAPN1-202ENST00000524773 CA14Q9ULX7 337 aa11.34□□□□□ -0.59
CAPN1-202ENST00000524773 FREM1Q5H8C1 2179 aa11.34□□□□□ -0.59
CAPN1-202ENST00000524773 EXPH5Q8NEV8 1989 aa11.34□□□□□ -0.59
CAPN1-202ENST00000524773 CCL3P10147 92 aa11.33□□□□□ -0.6
CAPN1-202ENST00000524773 ZNF32P17041 273 aa11.33□□□□□ -0.6
CAPN1-202ENST00000524773 DDTP30046 118 aa11.33□□□□□ -0.6
CAPN1-202ENST00000524773 ZNF266Q14584 549 aa11.33□□□□□ -0.6
CAPN1-202ENST00000524773 C17orf82Q86X59 251 aaPredicted RBP11.33□□□□□ -0.6
CAPN1-202ENST00000524773 ZNF100Q8IYN0 542 aa11.33□□□□□ -0.6
CAPN1-202ENST00000524773 LFNGQ8NES3 379 aa11.33□□□□□ -0.6
CAPN1-202ENST00000524773 OR5T1Q8NG75 326 aa11.33□□□□□ -0.6
CAPN1-202ENST00000524773 ATG101Q9BSB4 218 aa11.33□□□□□ -0.6
CAPN1-202ENST00000524773 SRXN1Q9BYN0 137 aa11.33□□□□□ -0.6
CAPN1-202ENST00000524773 TMEM222Q9H0R3 208 aa11.33□□□□□ -0.6
CAPN1-202ENST00000524773 PLEKHF2Q9H8W4 249 aa11.33□□□□□ -0.6
CAPN1-202ENST00000524773 UNKLQ9H9P5 680 aaKnown RBP11.33□□□□□ -0.6
CAPN1-202ENST00000524773 KIAA1456Q9P272 454 aa11.33□□□□□ -0.6
CAPN1-202ENST00000524773 IGHV3-64DA0A0J9YX35 117 aa11.33□□□□□ -0.6
CAPN1-202ENST00000524773 ZNF705GA8MUZ8 300 aaPredicted RBP11.33□□□□□ -0.6
CAPN1-202ENST00000524773 SCRG1O75711 98 aa11.33□□□□□ -0.6
CAPN1-202ENST00000524773 BMP5P22003 454 aa11.33□□□□□ -0.6
CAPN1-202ENST00000524773 ECI1P42126 302 aa11.33□□□□□ -0.6
CAPN1-202ENST00000524773 ELLP55199 621 aaPredicted RBP11.33□□□□□ -0.6
CAPN1-202ENST00000524773 SUMO3P55854 103 aaPredicted RBP11.33□□□□□ -0.6
CAPN1-202ENST00000524773 HNRNPKP61978 463 aaKnown RBP eCLIP11.33□□□□□ -0.68e-6■■■■□ 20.7
CAPN1-202ENST00000524773 USF2Q15853 346 aaPredicted RBP11.33□□□□□ -0.6
CAPN1-202ENST00000524773 ZNF385CQ66K41 422 aaPredicted RBP11.33□□□□□ -0.6
CAPN1-202ENST00000524773 SYT13Q7L8C5 426 aa11.33□□□□□ -0.6
CAPN1-202ENST00000524773 DPPA2Q7Z7J5 298 aa11.33□□□□□ -0.6
CAPN1-202ENST00000524773 CARFQ8N187 725 aa11.33□□□□□ -0.6
CAPN1-202ENST00000524773 GPR137CQ8N3F9 429 aa11.33□□□□□ -0.6
CAPN1-202ENST00000524773 PRR18Q8N4B5 295 aa11.33□□□□□ -0.6
CAPN1-202ENST00000524773 IL22RA1Q8N6P7 574 aa11.33□□□□□ -0.6
CAPN1-202ENST00000524773 ZIC4Q8N9L1 334 aa11.33□□□□□ -0.6
CAPN1-202ENST00000524773 SPTSSAQ969W0 71 aa11.33□□□□□ -0.6
CAPN1-202ENST00000524773 C11orf1Q9H5F2 150 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms