RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 OR6C3Q9NZP0 311 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 RNF24Q9Y225 148 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 KIAA1549Q9HCM3 1950 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 PRSS37A4D1T9 235 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 MAP1LC3B2A6NCE7 125 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 CST7O76096 145 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 MDH2P40926 338 aaKnown RBP7.27□□□□□ -1.25
CSMD1-213ENST00000523488 ARL6IP1Q15041 203 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 PHLDA2Q53GA4 152 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 ZNF787Q6DD87 383 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 KCNIP4Q6PIL6 250 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 LYZL2Q7Z4W2 148 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 ZNF709Q8N972 641 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 OR2T10Q8NGZ9 312 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 CORO2AQ92828 525 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 SAMD10Q9BYL1 202 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 MAP1LC3BQ9GZQ8 125 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 MTIF3Q9H2K0 278 aaKnown RBP7.27□□□□□ -1.25
CSMD1-213ENST00000523488 OR51I2Q9H344 312 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 LIME1Q9H400 295 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 TMEM9BQ9NQ34 198 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 POLR1DQ9Y2S0 133 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 PXMP4Q9Y6I8 212 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 MPDZO75970 2070 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 DDAH2O95865 285 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 TTRP02766 147 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 PRNPP04156 253 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 OR5G3P0C626 314 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 CEACAM8P31997 349 aaPredicted RBP7.27□□□□□ -1.25
CSMD1-213ENST00000523488 ARR3P36575 388 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 SGCBQ16585 318 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 OR8G2PQ6IF36 304 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 LIAT1Q6ZQX7 453 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 FOXL2NBQ6ZUU3 175 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 LINC00346Q8IVM7 164 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 OR1L6Q8NGR2 347 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 OR5C1Q8NGR4 320 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 VN1R17PQ8TDU5 208 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 GABRG3Q99928 467 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 APOOQ9BUR5 198 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 OR10A2Q9H208 303 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 PRSS50Q9UI38 385 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 SLC17A4Q9Y2C5 497 aa7.27□□□□□ -1.25
CSMD1-213ENST00000523488 RBM7Q9Y580 266 aaKnown RBP7.27□□□□□ -1.25
CSMD1-213ENST00000523488 IGHV2-70DA0A0C4DH43 119 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 SERINC4A6NH21 518 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 TMEM250H0YL14 139 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 CIDEAO60543 219 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 GPR75O95800 540 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 PDGFBP01127 241 aaPredicted RBP7.26□□□□□ -1.25
CSMD1-213ENST00000523488 IGHEP01854 428 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 IGHG1P01857 330 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 RUNX1Q01196 453 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 ZNF77Q15935 545 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 GAB4Q2WGN9 574 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 BSXQ3C1V8 233 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 KRTAP27-1Q3LI81 207 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 FAM160A2Q8N612 972 aaPredicted RBP7.26□□□□□ -1.25
CSMD1-213ENST00000523488 SCGB1C1Q8TD33 95 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 RTN4IP1Q8WWV3 396 aaPredicted RBP7.26□□□□□ -1.25
CSMD1-213ENST00000523488 ZCCHC14Q8WYQ9 949 aaKnown RBP7.26□□□□□ -1.25
CSMD1-213ENST00000523488 RPUSD4Q96CM3 377 aaKnown RBP7.26□□□□□ -1.25
CSMD1-213ENST00000523488 C10orf35Q96D05 121 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 STRADBQ9C0K7 418 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 B3GAT1Q9P2W7 334 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 THAP10Q9P2Z0 257 aaPredicted RBP7.26□□□□□ -1.25
CSMD1-213ENST00000523488 LINC01553A4QN01 128 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 FGF17O60258 216 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 ZNF728P0DKX0 622 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 CT45A8P0DMV1 189 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 CT45A9P0DMV2 189 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 ID3Q02535 119 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 VAMP3Q15836 100 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 TCTN1Q2MV58 587 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 C2orf27AQ580R0 203 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 CT45A2Q5DJT8 189 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 LY6G5CQ5SRR4 150 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 OR5L1Q8NGL2 311 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 ARRDC3Q96B67 414 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 WWTR1Q9GZV5 400 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 NAA60Q9H7X0 242 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 J3QR06 171 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 ONECUT2O95948 504 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 DBHP09172 617 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 NKX2-1P43699 371 aaPredicted RBP7.26□□□□□ -1.25
CSMD1-213ENST00000523488 HNRNPA3P51991 378 aaKnown RBP7.26□□□□□ -1.25
CSMD1-213ENST00000523488 FOXL1Q12952 345 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 IL24Q13007 206 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 DAZAP2Q15038 168 aaPredicted RBP7.26□□□□□ -1.25
CSMD1-213ENST00000523488 ZNF726P1Q15940 193 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 NMSQ5H8A3 153 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 PSRC1Q6PGN9 363 aaPredicted RBP7.26□□□□□ -1.25
CSMD1-213ENST00000523488 GCNT2Q8N0V5 402 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 TMEM52Q8NDY8 209 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 OR2AJ1Q8NGZ0 328 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 ANAPC16Q96DE5 110 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 NKX2-4Q9H2Z4 354 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 TXNIPQ9H3M7 391 aa7.26□□□□□ -1.25
CSMD1-213ENST00000523488 PNRC2Q9NPJ4 139 aaKnown RBP7.26□□□□□ -1.25
CSMD1-213ENST00000523488 NAT8Q9UHE5 227 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms