RNA–Protein interactions for RNA: ENST00000522855.5

SKP1-210, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SKP1, Length 802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-210ENST00000522855 SPCS3P61009 180 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 LYZP61626 148 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 BTN3A2P78410 334 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 EGFEM1PQ0D2K5 195 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 SF3A2Q15428 464 aaKnown RBP3.1□□□□□ -1.91
SKP1-210ENST00000522855 ZNF79Q15937 498 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 RNF212Q495C1 297 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 CDNFQ49AH0 187 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 DEFB134Q4QY38 66 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 PAGE3Q5JUK9 113 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 C9orf129Q5T035 196 aaKnown RBP3.1□□□□□ -1.91
SKP1-210ENST00000522855 CPTPQ5TA50 214 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 TMEM236Q5W0B7 351 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 OR4F3Q6IEY1 312 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 FRMPD2BQ6IN97 320 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 C3orf33Q6P1S2 294 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 HSDL2Q6YN16 418 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 RTL4Q6ZR62 310 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 ABHD13Q7L211 337 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 ACOT4Q8N9L9 421 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 OR2T4Q8NH00 348 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 OR5K1Q8NHB7 308 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 NT5CQ8TCD5 201 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 PAQR8Q8TEZ7 354 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 C16orf78Q8WTQ4 265 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 EXOSC8Q96B26 276 aaKnown RBP3.1□□□□□ -1.91
SKP1-210ENST00000522855 PPCDCQ96CD2 204 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 MS4A6EQ96DS6 147 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 SEC22AQ96IW7 307 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 TRNT1Q96Q11 434 aaKnown RBP3.1□□□□□ -1.91
SKP1-210ENST00000522855 OR2A5Q96R48 311 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 MED18Q9BUE0 208 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 BCL2L14Q9BZR8 327 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 ZNF436Q9C0F3 470 aaPredicted RBP3.1□□□□□ -1.91
SKP1-210ENST00000522855 REEP4Q9H6H4 257 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 ZDHHC11Q9H8X9 412 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 RNF122Q9H9V4 155 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 FAM60AQ9NP50 221 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 LHX9Q9NQ69 397 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 SDHAF2Q9NX18 166 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 CMTM6Q9NX76 183 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 DUX4Q9UBX2 424 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 NUFIP1Q9UHK0 495 aaKnown RBP3.1□□□□□ -1.91
SKP1-210ENST00000522855 BTNL2Q9UIR0 455 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 CBY1Q9Y3M2 126 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 SAMHD1Q9Y3Z3 626 aaKnown RBP3.1□□□□□ -1.91
SKP1-210ENST00000522855 HSPB11Q9Y547 144 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 TIMM10BQ9Y5J6 103 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 NUBP2Q9Y5Y2 271 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 DSPP15924 2871 aaKnown RBP3.1□□□□□ -1.91
SKP1-210ENST00000522855 LOC400499M0QZD8 3231 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 ROS1P08922 2347 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 SHANK1Q9Y566 2161 aa3.1□□□□□ -1.91
SKP1-210ENST00000522855 BOD1L1Q8NFC6 3051 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 CACNA1BQ00975 2339 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 TRAV26-1A0A087WT03 109 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 A0A096LPI6 279 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 C9orf170A2RU37 121 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 VSTM2BA6NLU5 285 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 GABRR3A8MPY1 467 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 D6RAR5 112 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 RFXANKO14593 260 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 BCKDKO14874 412 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 ZNF264O43296 627 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 RDH16O75452 317 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 CRTAPO75718 401 aaPredicted RBP3.09□□□□□ -1.91
SKP1-210ENST00000522855 RBBP9O75884 186 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 CPSF4O95639 269 aaKnown RBP3.09□□□□□ -1.91
SKP1-210ENST00000522855 CLIC3O95833 236 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 C6orf47O95873 294 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 SERPINA5P05154 406 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 CSF3P09919 207 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 PIPP12273 146 aaPredicted RBP3.09□□□□□ -1.91
SKP1-210ENST00000522855 GABRR1P24046 479 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 CD1CP29017 333 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 GTF2E2P29084 291 aaKnown RBP3.09□□□□□ -1.91
SKP1-210ENST00000522855 PMELP40967 661 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 CDKN2CP42773 168 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 TGM4P49221 684 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 DUSP3P51452 185 aaPredicted RBP3.09□□□□□ -1.91
SKP1-210ENST00000522855 SUCLG1P53597 346 aaKnown RBP3.09□□□□□ -1.91
SKP1-210ENST00000522855 MTPNP58546 118 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 SKP1P63208 163 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 PSPHP78330 225 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 CCL7P80098 99 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 DCDP81605 110 aaKnown RBP3.09□□□□□ -1.91
SKP1-210ENST00000522855 TNFRSF17Q02223 184 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 C2orf80Q0P641 193 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 BTN1A1Q13410 526 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 ILKQ13418 452 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 MAD2L1BPQ15013 274 aaPredicted RBP3.09□□□□□ -1.91
SKP1-210ENST00000522855 NCF4Q15080 339 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 PDZK1Q5T2W1 519 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 SAXO2Q658L1 398 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 GLYATQ6IB77 296 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 FAM71E1Q6IPT2 247 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 PLET1Q6UQ28 207 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 UQCC3Q6UW78 93 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 TMPRSS11AQ6ZMR5 421 aa3.09□□□□□ -1.91
SKP1-210ENST00000522855 PRSS41Q7RTY9 318 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms