RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 ICE1Q9Y2F5 2266 aa12.23□□□□□ -0.45
CLN8-204ENST00000519254 TRAV24A0A0B4J272 114 aa12.23□□□□□ -0.45
CLN8-204ENST00000519254 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.23□□□□□ -0.45
CLN8-204ENST00000519254 C9orf170A2RU37 121 aa12.23□□□□□ -0.45
CLN8-204ENST00000519254 SPRY3O43610 288 aa12.23□□□□□ -0.45
CLN8-204ENST00000519254 NAPSAO96009 420 aa12.23□□□□□ -0.45
CLN8-204ENST00000519254 OR5H8P0DN80 308 aa12.23□□□□□ -0.45
CLN8-204ENST00000519254 AKR1C4P17516 323 aa12.23□□□□□ -0.45
CLN8-204ENST00000519254 SERPINF1P36955 418 aa12.23□□□□□ -0.45
CLN8-204ENST00000519254 Q6P435 159 aa12.23□□□□□ -0.45
CLN8-204ENST00000519254 Q8IYB0 196 aa12.23□□□□□ -0.45
CLN8-204ENST00000519254 SUMF2Q8NBJ7 301 aa12.23□□□□□ -0.45
CLN8-204ENST00000519254 TMEM230Q96A57 120 aa12.23□□□□□ -0.45
CLN8-204ENST00000519254 CXXC4Q9H2H0 198 aa12.23□□□□□ -0.45
CLN8-204ENST00000519254 IFT22Q9H7X7 185 aa12.23□□□□□ -0.45
CLN8-204ENST00000519254 ZNF286AQ9HBT8 521 aa12.23□□□□□ -0.45
CLN8-204ENST00000519254 A1L4Q6 167 aa12.22□□□□□ -0.45
CLN8-204ENST00000519254 FAM172BPA6NC97 362 aa12.22□□□□□ -0.45
CLN8-204ENST00000519254 MCRIP1C9JLW8 97 aa12.22□□□□□ -0.45
CLN8-204ENST00000519254 J3QKU1 62 aa12.22□□□□□ -0.45
CLN8-204ENST00000519254 GOSR2O14653 212 aa12.22□□□□□ -0.45
CLN8-204ENST00000519254 SLC22A5O76082 557 aa12.22□□□□□ -0.45
CLN8-204ENST00000519254 ACAA1P09110 424 aaPredicted RBP12.22□□□□□ -0.45
CLN8-204ENST00000519254 DNASE1P24855 282 aa12.22□□□□□ -0.45
CLN8-204ENST00000519254 TAS2R31P59538 309 aa12.22□□□□□ -0.45
CLN8-204ENST00000519254 RAP2BP61225 183 aa12.22□□□□□ -0.45
CLN8-204ENST00000519254 DHODHQ02127 395 aa12.22□□□□□ -0.45
CLN8-204ENST00000519254 BAMBIQ13145 260 aa12.22□□□□□ -0.45
CLN8-204ENST00000519254 ZNF672Q499Z4 452 aaPredicted RBP12.22□□□□□ -0.45
CLN8-204ENST00000519254 DCAF12L2Q5VW00 463 aa12.22□□□□□ -0.45
CLN8-204ENST00000519254 DHRS11Q6UWP2 260 aa12.22□□□□□ -0.45
CLN8-204ENST00000519254 C9orf62Q8N4C0 152 aa12.22□□□□□ -0.45
CLN8-204ENST00000519254 LILRB1Q8NHL6 650 aaPredicted RBP12.22□□□□□ -0.45
CLN8-204ENST00000519254 SCGB3A2Q96PL1 93 aa12.22□□□□□ -0.45
CLN8-204ENST00000519254 ZNF2Q9BSG1 426 aaPredicted RBP12.22□□□□□ -0.45
CLN8-204ENST00000519254 TLNRD1Q9H1K6 362 aa12.22□□□□□ -0.45
CLN8-204ENST00000519254 SPACA1Q9HBV2 294 aa12.22□□□□□ -0.45
CLN8-204ENST00000519254 DECR2Q9NUI1 292 aa12.22□□□□□ -0.45
CLN8-204ENST00000519254 NECAP2Q9NVZ3 263 aa12.22□□□□□ -0.45
CLN8-204ENST00000519254 MGAT4AQ9UM21 535 aa12.22□□□□□ -0.45
CLN8-204ENST00000519254 KLF2Q9Y5W3 355 aaPredicted RBP12.22□□□□□ -0.45
CLN8-204ENST00000519254 HSPB6O14558 160 aa12.21□□□□□ -0.45
CLN8-204ENST00000519254 GSTT2P0CG29 244 aa12.21□□□□□ -0.45
CLN8-204ENST00000519254 PI3P19957 117 aa12.21□□□□□ -0.45
CLN8-204ENST00000519254 GLRA1P23415 457 aa12.21□□□□□ -0.45
CLN8-204ENST00000519254 ZNF81P51508 661 aa12.21□□□□□ -0.45
CLN8-204ENST00000519254 IL13RA1P78552 427 aa12.21□□□□□ -0.45
CLN8-204ENST00000519254 SURF2Q15527 256 aaPredicted RBP12.21□□□□□ -0.45
CLN8-204ENST00000519254 MPPED2Q15777 294 aa12.21□□□□□ -0.45
CLN8-204ENST00000519254 TMEM128Q5BJH2 165 aa12.21□□□□□ -0.45
CLN8-204ENST00000519254 LY6G6FQ5SQ64 297 aa12.21□□□□□ -0.45
CLN8-204ENST00000519254 Q6ZS49 121 aa12.21□□□□□ -0.45
CLN8-204ENST00000519254 MITD1Q8WV92 249 aa12.21□□□□□ -0.45
CLN8-204ENST00000519254 ELMOD3Q96FG2 381 aa12.21□□□□□ -0.45
CLN8-204ENST00000519254 TMEM204Q9BSN7 226 aa12.21□□□□□ -0.45
CLN8-204ENST00000519254 WDR13Q9H1Z4 485 aa12.21□□□□□ -0.45
CLN8-204ENST00000519254 HS3ST1O14792 307 aa12.2□□□□□ -0.46
CLN8-204ENST00000519254 NOS1APO75052 506 aaPredicted RBP12.2□□□□□ -0.46
CLN8-204ENST00000519254 ZNF205O95201 554 aa12.2□□□□□ -0.46
CLN8-204ENST00000519254 GLAP06280 429 aa12.2□□□□□ -0.46
CLN8-204ENST00000519254 CD34P28906 385 aa12.2□□□□□ -0.46
CLN8-204ENST00000519254 APOBEC3AP31941 199 aaPredicted RBP12.2□□□□□ -0.46
CLN8-204ENST00000519254 SRSF7Q16629 238 aaKnown RBP eCLIP12.2□□□□□ -0.46
CLN8-204ENST00000519254 PRAMEF6Q5VXH4 476 aa12.2□□□□□ -0.46
CLN8-204ENST00000519254 ZNF826PQ6ZT77 177 aa12.2□□□□□ -0.46
CLN8-204ENST00000519254 SPERTQ8NA61 448 aa12.2□□□□□ -0.46
CLN8-204ENST00000519254 POC1AQ8NBT0 407 aa12.2□□□□□ -0.46
CLN8-204ENST00000519254 RDH5Q92781 318 aa12.2□□□□□ -0.46
CLN8-204ENST00000519254 TMEM246Q9BRR3 403 aa12.2□□□□□ -0.46
CLN8-204ENST00000519254 DPCDQ9BVM2 203 aaPredicted RBP12.2□□□□□ -0.46
CLN8-204ENST00000519254 TMPRSS13Q9BYE2 586 aa12.2□□□□□ -0.46
CLN8-204ENST00000519254 HES4Q9HCC6 221 aa12.2□□□□□ -0.46
CLN8-204ENST00000519254 CHMP1AQ9HD42 196 aaPredicted RBP12.2□□□□□ -0.46
CLN8-204ENST00000519254 Q9N2K0 584 aa12.2□□□□□ -0.46
CLN8-204ENST00000519254 OPN4Q9UHM6 478 aa12.2□□□□□ -0.46
CLN8-204ENST00000519254 A6NLC8 198 aa12.2□□□□□ -0.46
CLN8-204ENST00000519254 DEGS1O15121 323 aa12.2□□□□□ -0.46
CLN8-204ENST00000519254 NXPH2O95156 264 aa12.2□□□□□ -0.46
CLN8-204ENST00000519254 DUS4LO95620 317 aaKnown RBP12.2□□□□□ -0.46
CLN8-204ENST00000519254 VAMP1P23763 118 aa12.2□□□□□ -0.46
CLN8-204ENST00000519254 SUPT4H1P63272 117 aaKnown RBP12.2□□□□□ -0.46
CLN8-204ENST00000519254 ZNF146Q15072 292 aa12.2□□□□□ -0.46
CLN8-204ENST00000519254 C5orf24Q7Z6I8 188 aa12.2□□□□□ -0.46
CLN8-204ENST00000519254 GRPEL2Q8TAA5 225 aa12.2□□□□□ -0.46
CLN8-204ENST00000519254 NEK7Q8TDX7 302 aa12.2□□□□□ -0.46
CLN8-204ENST00000519254 DHRS9Q9BPW9 319 aa12.2□□□□□ -0.46
CLN8-204ENST00000519254 DYNLRB1Q9NP97 96 aa12.2□□□□□ -0.46
CLN8-204ENST00000519254 UFSP2Q9NUQ7 469 aa12.2□□□□□ -0.46
CLN8-204ENST00000519254 SLC23A1Q9UHI7 598 aa12.2□□□□□ -0.46
CLN8-204ENST00000519254 HSPB11Q9Y547 144 aa12.2□□□□□ -0.46
CLN8-204ENST00000519254 MYO18BQ8IUG5 2567 aa12.19□□□□□ -0.46
CLN8-204ENST00000519254 A6NNC1 897 aa12.19□□□□□ -0.46
CLN8-204ENST00000519254 M0R233 179 aa12.19□□□□□ -0.46
CLN8-204ENST00000519254 GMFBP60983 142 aa12.19□□□□□ -0.46
CLN8-204ENST00000519254 SNRPD2P62316 118 aaKnown RBP12.19□□□□□ -0.46
CLN8-204ENST00000519254 LIN54Q6MZP7 749 aa12.19□□□□□ -0.46
CLN8-204ENST00000519254 WDR82Q6UXN9 313 aa12.19□□□□□ -0.46
CLN8-204ENST00000519254 C20orf204Q6ZNR8 217 aa12.19□□□□□ -0.46
CLN8-204ENST00000519254 ZCCHC24Q8N2G6 241 aaKnown RBP12.19□□□□□ -0.46
CLN8-204ENST00000519254 MRPL30Q8TCC3 161 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms