RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 MRAPQ8TCY5 172 aa6.1□□□□□ -1.43
CLK4-202ENST00000519132 TP53RKQ96S44 253 aa6.1□□□□□ -1.43
CLK4-202ENST00000519132 CCDC167Q9P0B6 97 aa6.1□□□□□ -1.43
CLK4-202ENST00000519132 COMMD3Q9UBI1 195 aa6.1□□□□□ -1.43
CLK4-202ENST00000519132 PSG8Q9UQ74 426 aa6.1□□□□□ -1.43
CLK4-202ENST00000519132 EXOSC1Q9Y3B2 195 aaKnown RBP6.1□□□□□ -1.43
CLK4-202ENST00000519132 RFNGQ9Y644 331 aa6.1□□□□□ -1.43
CLK4-202ENST00000519132 COL27A1Q8IZC6 1860 aaPredicted RBP6.09□□□□□ -1.43
CLK4-202ENST00000519132 TGIF2-C20orf24A0A0A6YYL0 155 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 A0A1B0GW55 424 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 A8MVM7 634 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 DVL1O14640 695 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 CASKO14936 926 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 SLC35G6P0C7Q6 338 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 DUX4L2P0CJ85 424 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 DUX4L3P0CJ86 424 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 DUX4L4P0CJ87 422 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 DUX4L5P0CJ88 424 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 DUX4L6P0CJ89 424 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 DUX4L7P0CJ90 424 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 DUSP3P51452 185 aaPredicted RBP6.09□□□□□ -1.43
CLK4-202ENST00000519132 ERVFC1-1P60608 527 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 SRYQ05066 204 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 TPBGQ13641 420 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 C3AR1Q16581 482 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 COMMD6Q7Z4G1 85 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 SYS1Q8N2H4 156 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 OR52N5Q8NH56 324 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 MS4A6EQ96DS6 147 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 AURKBQ96GD4 344 aaPredicted RBP6.09□□□□□ -1.43
CLK4-202ENST00000519132 ADGRG7Q96K78 797 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 CLMPQ9H6B4 373 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 DUX4Q9UBX2 424 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 SDK1Q7Z5N4 2213 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 DNAH14Q0VDD8 3507 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 MEIKINA0A087WXM9 373 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 LOC101059948A0A1B0GTJ6 334 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 A0A1W2PP18 115 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 TMEM218A2RU14 115 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 OR6C6A6NF89 314 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 IFITM10A6NMD0 228 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 CORTO00230 105 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 FAAHO00519 579 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 PLPP1O14494 284 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 NBR2O15453 112 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 BCHEP06276 602 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 CT45A8P0DMV1 189 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 CT45A9P0DMV2 189 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 SELEP16581 610 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 CD1CP29017 333 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 POLR2JP52435 117 aaKnown RBP6.09□□□□□ -1.43
CLK4-202ENST00000519132 PPP1CAP62136 330 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 ZNF763Q0D2J5 394 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 MAPK14Q16539 360 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 TMEM176BQ3YBM2 270 aaPredicted RBP6.09□□□□□ -1.43
CLK4-202ENST00000519132 CT45A2Q5DJT8 189 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 OR10D4PQ8NGN7 298 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 OR9I1Q8NGQ6 314 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 RNASEH2CQ8TDP1 164 aaKnown RBP6.09□□□□□ -1.43
CLK4-202ENST00000519132 ZNF75AQ96N20 296 aa6.09□□□□□ -1.43
CLK4-202ENST00000519132 METTL17Q9H7H0 456 aaPredicted RBP6.09□□□□□ -1.43
CLK4-202ENST00000519132 LAMA1P25391 3075 aa6.09□□□□□ -1.44
CLK4-202ENST00000519132 IGHV2-70DA0A0C4DH43 119 aa6.08□□□□□ -1.44
CLK4-202ENST00000519132 PNMA8CA0A1B0GUJ8 204 aa6.08□□□□□ -1.44
CLK4-202ENST00000519132 PPP1R2P9O14990 202 aa6.08□□□□□ -1.44
CLK4-202ENST00000519132 SLC19A2O60779 497 aa6.08□□□□□ -1.44
CLK4-202ENST00000519132 EEDO75530 441 aaKnown RBP6.08□□□□□ -1.44
CLK4-202ENST00000519132 MMP23AO75900 390 aa6.08□□□□□ -1.44
CLK4-202ENST00000519132 CFDP00746 253 aaPredicted RBP6.08□□□□□ -1.44
CLK4-202ENST00000519132 IGHV4-30-4P0DP06 118 aa6.08□□□□□ -1.44
CLK4-202ENST00000519132 C4BPBP20851 252 aa6.08□□□□□ -1.44
CLK4-202ENST00000519132 KITLGP21583 273 aa6.08□□□□□ -1.44
CLK4-202ENST00000519132 C2orf80Q0P641 193 aa6.08□□□□□ -1.44
CLK4-202ENST00000519132 LPAL2Q16609 132 aa6.08□□□□□ -1.44
CLK4-202ENST00000519132 FAHD1Q6P587 224 aa6.08□□□□□ -1.44
CLK4-202ENST00000519132 ZNF613Q6PF04 617 aa6.08□□□□□ -1.44
CLK4-202ENST00000519132 AHSA2Q719I0 299 aa6.08□□□□□ -1.44
CLK4-202ENST00000519132 OLIG3Q7RTU3 272 aa6.08□□□□□ -1.44
CLK4-202ENST00000519132 JAGN1Q8N5M9 183 aa6.08□□□□□ -1.44
CLK4-202ENST00000519132 OR13C8Q8NGS7 320 aa6.08□□□□□ -1.44
CLK4-202ENST00000519132 OR1P1Q8NH06 330 aa6.08□□□□□ -1.44
CLK4-202ENST00000519132 ROPN1LQ96C74 230 aa6.08□□□□□ -1.44
CLK4-202ENST00000519132 RCN3Q96D15 328 aa6.08□□□□□ -1.44
CLK4-202ENST00000519132 DPY30Q9C005 99 aa6.08□□□□□ -1.44
CLK4-202ENST00000519132 AICDAQ9GZX7 198 aa6.08□□□□□ -1.44
CLK4-202ENST00000519132 FGF21Q9NSA1 209 aa6.08□□□□□ -1.44
CLK4-202ENST00000519132 WDR45Q9Y484 360 aa6.08□□□□□ -1.44
CLK4-202ENST00000519132 RP1P56715 2156 aa6.08□□□□□ -1.44
CLK4-202ENST00000519132 A0A0A6YYD5 115 aa6.08□□□□□ -1.44
CLK4-202ENST00000519132 IGSF23A1L1A6 192 aa6.08□□□□□ -1.44
CLK4-202ENST00000519132 PRR32B1ATL7 298 aa6.08□□□□□ -1.44
CLK4-202ENST00000519132 PHOX2AO14813 284 aa6.08□□□□□ -1.44
CLK4-202ENST00000519132 THY1P04216 161 aa6.08□□□□□ -1.44
CLK4-202ENST00000519132 RFX2P48378 723 aa6.08□□□□□ -1.44
CLK4-202ENST00000519132 OR1D5P58170 312 aa6.08□□□□□ -1.44
CLK4-202ENST00000519132 SYPL1Q16563 259 aa6.08□□□□□ -1.44
CLK4-202ENST00000519132 SRSF7Q16629 238 aaKnown RBP eCLIP6.08□□□□□ -1.44
CLK4-202ENST00000519132 ARHGAP11BQ3KRB8 267 aa6.08□□□□□ -1.44
CLK4-202ENST00000519132 SAMD4BQ5PRF9 694 aaKnown RBP6.08□□□□□ -1.44
CLK4-202ENST00000519132 FAAP20Q6NZ36 180 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms