RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 HES1Q14469 280 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 SPCS2Q15005 226 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 CCSMST1Q4G0I0 132 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 C22orf42Q6IC83 251 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 REEP3Q6NUK4 255 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 C1orf94Q6P1W5 598 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 ZNF600Q6ZNG1 722 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 SLC25A48Q6ZT89 311 aaKnown RBP2.26□□□□□ -2.05
CPNE3-204ENST00000517862 ACOT7LQ6ZUV0 252 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 SSX9Q7RTT3 188 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 RDH10Q8IZV5 341 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 PUSL1Q8N0Z8 303 aaKnown RBP2.26□□□□□ -2.05
CPNE3-204ENST00000517862 FTMTQ8N4E7 242 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 ATPAF2Q8N5M1 289 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 LRRC75AQ8NAA5 344 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 CSNK1G2-AS1Q8NCQ2 148 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 PROKR2Q8NFJ6 384 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 BBS1Q8NFJ9 593 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 OR4A15Q8NGL6 344 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 OR9G4Q8NGQ1 327 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 OR9A1PQ8NGU1 263 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 OR52E5Q8NH55 327 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 DOK4Q8TEW6 326 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 PYROXD1Q8WU10 500 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 TFB1MQ8WVM0 346 aaKnown RBP2.26□□□□□ -2.05
CPNE3-204ENST00000517862 HGDQ93099 445 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 APH1AQ96BI3 265 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 SLC25A38Q96DW6 304 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 WDR34Q96EX3 536 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 PAGE5Q96GU1 130 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 SEC22AQ96IW7 307 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 OR5B12Q96R08 314 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 FAIM2Q9BWQ8 316 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 DSN1Q9H410 356 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 NOX3Q9HBY0 568 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 TAAR3PQ9P1P4 343 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 PEF1Q9UBV8 284 aaKnown RBP2.26□□□□□ -2.05
CPNE3-204ENST00000517862 CLN8Q9UBY8 286 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 MOB4Q9Y3A3 225 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 COMMD3-BMI1R4GMX3 469 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 IGHV3-15A0A0B4J1V0 119 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 NDUFAF8A1L188 74 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 C17orf51A8MQB3 221 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 FAM220BPB1ANY3 271 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 LOC110117498-PIK3R3F6TDL0 507 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 H7C423 109 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 ZNF701M0R085 212 aaPredicted RBP2.25□□□□□ -2.05
CPNE3-204ENST00000517862 RAD51CO43502 376 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 CTNSO60931 367 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 SRP72O76094 671 aaKnown RBP2.25□□□□□ -2.05
CPNE3-204ENST00000517862 DUSP14O95147 198 aaKnown RBP2.25□□□□□ -2.05
CPNE3-204ENST00000517862 TBX6O95947 436 aaPredicted RBP2.25□□□□□ -2.05
CPNE3-204ENST00000517862 LALBAP00709 142 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 CRYGCP07315 174 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 STAG3L2P0CL84 134 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 MYL2P10916 166 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 PGAM2P15259 253 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 MGMTP16455 207 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 SLC2A5P22732 501 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 IL12AP29459 219 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 SDC4P31431 198 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 VHLP40337 213 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 MDH2P40926 338 aaKnown RBP2.25□□□□□ -2.05
CPNE3-204ENST00000517862 NAA10P41227 235 aaPredicted RBP2.25□□□□□ -2.05
CPNE3-204ENST00000517862 CRATP43155 626 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 OR3A4PP47883 348 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 HADHBP55084 474 aaKnown RBP2.25□□□□□ -2.05
CPNE3-204ENST00000517862 ARF6P62330 175 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 ACTA2P62736 377 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 ACTG2P63267 376 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 ACTC1P68032 377 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 ACTA1P68133 377 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 PRB3Q04118 309 aaPredicted RBP2.25□□□□□ -2.05
CPNE3-204ENST00000517862 PDIA2Q13087 525 aaKnown RBP2.25□□□□□ -2.05
CPNE3-204ENST00000517862 ASAH1Q13510 395 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 GNMTQ14749 295 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 AANATQ16613 207 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 ZNF829Q3KNS6 432 aaPredicted RBP2.25□□□□□ -2.05
CPNE3-204ENST00000517862 C14orf177Q52M58 125 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 PAN3Q58A45 887 aaKnown RBP2.25□□□□□ -2.05
CPNE3-204ENST00000517862 ZC2HC1BQ5TFG8 222 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 Q6ZTC4 211 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 FRA10AC1Q70Z53 315 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 ARCQ7LC44 396 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 ZNF571Q7Z3V5 609 aaPredicted RBP2.25□□□□□ -2.05
CPNE3-204ENST00000517862 VMO1Q7Z5L0 202 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 LINC00523Q86TU6 105 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 LINC00596Q86U02 117 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 ZNF546Q86UE3 836 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 GTSCR1Q86UQ5 136 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 MYPOPQ86VE0 399 aaPredicted RBP2.25□□□□□ -2.05
CPNE3-204ENST00000517862 MICU2Q8IYU8 434 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 CMTM1Q8IZ96 169 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 PNKDQ8N490 385 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 FAM86B1Q8N7N1 296 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 OR8B3Q8NGG8 313 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 OR52E4Q8NGH9 312 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 OR2G2Q8NGZ5 317 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 ZNF596Q8TC21 504 aa2.25□□□□□ -2.05
CPNE3-204ENST00000517862 CD300LFQ8TDQ1 290 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms