RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 WDR89Q96FK6 387 aaPredicted RBP4.58□□□□□ -1.68
SCARNA20.4-201ENST00000516969 WFIKKN1Q96NZ8 548 aa4.58□□□□□ -1.68
SCARNA20.4-201ENST00000516969 ZNF2Q9BSG1 426 aaPredicted RBP4.58□□□□□ -1.68
SCARNA20.4-201ENST00000516969 MRPL37Q9BZE1 423 aaKnown RBP4.58□□□□□ -1.68
SCARNA20.4-201ENST00000516969 TMEM165Q9HC07 324 aa4.58□□□□□ -1.68
SCARNA20.4-201ENST00000516969 RASL12Q9NYN1 266 aa4.58□□□□□ -1.68
SCARNA20.4-201ENST00000516969 SLC23A1Q9UHI7 598 aa4.58□□□□□ -1.68
SCARNA20.4-201ENST00000516969 SHPKQ9UHJ6 478 aa4.58□□□□□ -1.68
SCARNA20.4-201ENST00000516969 OPN4Q9UHM6 478 aa4.58□□□□□ -1.68
SCARNA20.4-201ENST00000516969 DUSP13Q9UII6 198 aa4.58□□□□□ -1.68
SCARNA20.4-201ENST00000516969 MGAT4AQ9UM21 535 aa4.58□□□□□ -1.68
SCARNA20.4-201ENST00000516969 ATP23Q9Y6H3 246 aa4.58□□□□□ -1.68
SCARNA20.4-201ENST00000516969 RELNP78509 3460 aa4.58□□□□□ -1.68
SCARNA20.4-201ENST00000516969 ITPR1Q14643 2758 aa4.58□□□□□ -1.68
SCARNA20.4-201ENST00000516969 IGKV1-6A0A0C4DH72 117 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 IGHV3-64DA0A0J9YX35 117 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 KIR2DS1A0A191URI9 304 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 MED19A0JLT2 244 aaPredicted RBP4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 PLSCR5A0PG75 271 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 FAM172BPA6NC97 362 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 SRRM5B3KS81 715 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 H7C1Q1 480 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 IFNL4K9M1U5 179 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 ERVH48-1M5A8F1 160 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 CCL21O00585 134 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 WNT9BO14905 357 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 RGS13O14921 159 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 TUSC2O75896 110 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 SNAPC5O75971 98 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 SIX6O95475 246 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 HAND1O96004 215 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 KNG1P01042 644 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 CD8AP01732 235 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 HLA-AP01891 365 aaKnown RBP4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 ADH4P08319 380 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 SCTP09683 121 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 CTXN2P0C2S0 81 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 AKR1C4P17516 323 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 PI3P19957 117 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 DNASE1P24855 282 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 CD34P28906 385 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 CHRNB4P30926 498 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 FCGR2CP31995 323 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 KIR2DS4P43632 304 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 SELENOVP59797 346 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 ADORA2A-AS1P86434 159 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 PAX5Q02548 391 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 BSPH1Q075Z2 132 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 BAMBIQ13145 260 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 LY6DQ14210 128 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 KIR2DS1Q14954 304 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 HERPUD1Q15011 391 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 LGALSLQ3ZCW2 172 aaPredicted RBP4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 PAN3Q58A45 887 aaKnown RBP4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 SPRNQ5BIV9 151 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 IGSF11Q5DX21 431 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 DCAF12L2Q5VW00 463 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 PRAMEF6Q5VXH4 476 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 SLC35E4Q6ICL7 350 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 LPCAT3Q6P1A2 487 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 SLC22A25Q6T423 547 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 FIP1L1Q6UN15 594 aaKnown RBP4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 CLEC18BQ6UXF7 455 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 WFDC8Q8IUA0 241 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 C9orf62Q8N4C0 152 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 UXS1Q8NBZ7 420 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 OR5M8Q8NGP6 311 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 OR2T35Q8NGX2 323 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 PLPPR1Q8TBJ4 325 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 MOB3AQ96BX8 217 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 MEGF10Q96KG7 1140 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 PHB2Q99623 299 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 SYT3Q9BQG1 590 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 RSRP1Q9BUV0 290 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 TMPRSS13Q9BYE2 586 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 CHIAQ9BZP6 476 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 CHMP1AQ9HD42 196 aaPredicted RBP4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 PLSCR3Q9NRY6 295 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 MBNL3Q9NUK0 354 aaKnown RBP4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 UFSP2Q9NUQ7 469 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 TAAR3PQ9P1P4 343 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 IL19Q9UHD0 177 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 GLS2Q9UI32 602 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 ZDHHC8Q9ULC8 765 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 PCDHB10Q9UN67 800 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 BOLA1Q9Y3E2 137 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 WIPI2Q9Y4P8 454 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 SPTAN1Q13813 2472 aaKnown RBP4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 KALRNO60229 2985 aa4.57□□□□□ -1.68
SCARNA20.4-201ENST00000516969 RAI1Q7Z5J4 1906 aaPredicted RBP4.56□□□□□ -1.68
SCARNA20.4-201ENST00000516969 TRBV6-7A0A0A0MS04 114 aa4.56□□□□□ -1.68
SCARNA20.4-201ENST00000516969 CRYM-AS1A6NIL9 109 aa4.56□□□□□ -1.68
SCARNA20.4-201ENST00000516969 A6NLC8 198 aa4.56□□□□□ -1.68
SCARNA20.4-201ENST00000516969 RFPL4AA6NLU0 287 aa4.56□□□□□ -1.68
SCARNA20.4-201ENST00000516969 HMSDA8MTL9 139 aa4.56□□□□□ -1.68
SCARNA20.4-201ENST00000516969 SHISA9B4DS77 424 aa4.56□□□□□ -1.68
SCARNA20.4-201ENST00000516969 NPIPB11E5RHQ5 1161 aa4.56□□□□□ -1.68
SCARNA20.4-201ENST00000516969 RFPL4AL1F8VTS6 287 aa4.56□□□□□ -1.68
SCARNA20.4-201ENST00000516969 SIRPB1O00241 398 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms