RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 SMIM21Q3B7S5 101 aa16.98■□□□□ 0.31
TRIO-223ENST00000515710 Q5BKY6 102 aa16.98■□□□□ 0.31
TRIO-223ENST00000515710 SLC51BQ86UW2 128 aa16.98■□□□□ 0.31
TRIO-223ENST00000515710 TMEM185AQ8NFB2 350 aa16.98■□□□□ 0.31
TRIO-223ENST00000515710 MRPL30Q8TCC3 161 aaKnown RBP16.98■□□□□ 0.31
TRIO-223ENST00000515710 LRRC29Q8WV35 223 aa16.98■□□□□ 0.31
TRIO-223ENST00000515710 OR5H14A6NHG9 310 aa16.97■□□□□ 0.31
TRIO-223ENST00000515710 SIRPB1O00241 398 aa16.97■□□□□ 0.31
TRIO-223ENST00000515710 WNT9BO14905 357 aa16.97■□□□□ 0.31
TRIO-223ENST00000515710 ZNF660Q6AZW8 331 aaPredicted RBP16.97■□□□□ 0.31
TRIO-223ENST00000515710 ZNF880Q6PDB4 577 aa16.97■□□□□ 0.31
TRIO-223ENST00000515710 C17orf107Q6ZR85 190 aa16.97■□□□□ 0.31
TRIO-223ENST00000515710 FAM90A1Q86YD7 464 aa16.97■□□□□ 0.31
TRIO-223ENST00000515710 PLPPR2Q96GM1 343 aa16.97■□□□□ 0.31
TRIO-223ENST00000515710 DECR2Q9NUI1 292 aa16.97■□□□□ 0.31
TRIO-223ENST00000515710 MGAT4CQ9UBM8 478 aa16.97■□□□□ 0.31
TRIO-223ENST00000515710 NPTNQ9Y639 398 aa16.97■□□□□ 0.31
TRIO-223ENST00000515710 IFNL4K9M1U5 179 aa16.96■□□□□ 0.31
TRIO-223ENST00000515710 IGHV1-46P01743 117 aa16.96■□□□□ 0.31
TRIO-223ENST00000515710 C1QBP02746 253 aa16.96■□□□□ 0.31
TRIO-223ENST00000515710 ZBTB25P24278 435 aa16.96■□□□□ 0.31
TRIO-223ENST00000515710 GLP1RP43220 463 aa16.96■□□□□ 0.31
TRIO-223ENST00000515710 ADAM5Q6NVV9 412 aa16.96■□□□□ 0.31
TRIO-223ENST00000515710 LYG2Q86SG7 212 aa16.96■□□□□ 0.31
TRIO-223ENST00000515710 C12orf45Q8N5I9 185 aaPredicted RBP16.96■□□□□ 0.31
TRIO-223ENST00000515710 ITLN1Q8WWA0 313 aa16.96■□□□□ 0.31
TRIO-223ENST00000515710 ERGIC1Q969X5 290 aa16.96■□□□□ 0.31
TRIO-223ENST00000515710 ZNF436Q9C0F3 470 aaPredicted RBP16.96■□□□□ 0.31
TRIO-223ENST00000515710 SEBOXQ9HB31 216 aaPredicted RBP16.96■□□□□ 0.31
TRIO-223ENST00000515710 PLSCR3Q9NRY6 295 aa16.96■□□□□ 0.31
TRIO-223ENST00000515710 OR14J1Q9UGF5 321 aa16.96■□□□□ 0.31
TRIO-223ENST00000515710 SRRM5B3KS81 715 aa16.96■□□□□ 0.3
TRIO-223ENST00000515710 TRDCB7Z8K6 153 aa16.96■□□□□ 0.3
TRIO-223ENST00000515710 CD3EP07766 207 aa16.96■□□□□ 0.3
TRIO-223ENST00000515710 ADH4P08319 380 aa16.96■□□□□ 0.3
TRIO-223ENST00000515710 CTXN2P0C2S0 81 aa16.96■□□□□ 0.3
TRIO-223ENST00000515710 GZMKP49863 264 aa16.96■□□□□ 0.3
TRIO-223ENST00000515710 TNFAIP6P98066 277 aaPredicted RBP16.96■□□□□ 0.3
TRIO-223ENST00000515710 DHODHQ02127 395 aa16.96■□□□□ 0.3
TRIO-223ENST00000515710 DHRS2Q13268 280 aa16.96■□□□□ 0.3
TRIO-223ENST00000515710 ESCO2Q56NI9 601 aa16.96■□□□□ 0.3
TRIO-223ENST00000515710 ADAD2Q8NCV1 583 aaKnown RBP16.96■□□□□ 0.3
TRIO-223ENST00000515710 OR2AK2Q8NG84 335 aa16.96■□□□□ 0.3
TRIO-223ENST00000515710 LINC01560Q8TB33 94 aa16.96■□□□□ 0.3
TRIO-223ENST00000515710 C5orf66Q9H5L9 145 aa16.96■□□□□ 0.3
TRIO-223ENST00000515710 NUP50Q9UKX7 468 aa16.96■□□□□ 0.3
TRIO-223ENST00000515710 MGAT4AQ9UM21 535 aa16.96■□□□□ 0.3
TRIO-223ENST00000515710 SHISA9B4DS77 424 aa16.95■□□□□ 0.3
TRIO-223ENST00000515710 TMEM128Q5BJH2 165 aa16.95■□□□□ 0.3
TRIO-223ENST00000515710 GAPTQ8N292 157 aa16.95■□□□□ 0.3
TRIO-223ENST00000515710 MAP1BP46821 2468 aaKnown RBP16.95■□□□□ 0.3
TRIO-223ENST00000515710 C9orf170A2RU37 121 aa16.94■□□□□ 0.3
TRIO-223ENST00000515710 FABP7O15540 132 aa16.94■□□□□ 0.3
TRIO-223ENST00000515710 HLA-AP01891 365 aaKnown RBP16.94■□□□□ 0.3
TRIO-223ENST00000515710 PGAM2P15259 253 aa16.94■□□□□ 0.3
TRIO-223ENST00000515710 AKR1C4P17516 323 aa16.94■□□□□ 0.3
TRIO-223ENST00000515710 HTR2BP41595 481 aa16.94■□□□□ 0.3
TRIO-223ENST00000515710 PPP1R1AQ13522 171 aa16.94■□□□□ 0.3
TRIO-223ENST00000515710 ZNF497Q6ZNH5 498 aa16.94■□□□□ 0.3
TRIO-223ENST00000515710 MOB1BQ7L9L4 216 aa16.94■□□□□ 0.3
TRIO-223ENST00000515710 MOGAT3Q86VF5 341 aa16.94■□□□□ 0.3
TRIO-223ENST00000515710 GALNT11Q8NCW6 608 aa16.94■□□□□ 0.3
TRIO-223ENST00000515710 RTBDNQ9BSG5 229 aaPredicted RBP16.94■□□□□ 0.3
TRIO-223ENST00000515710 C14orf166Q9Y224 244 aaKnown RBP16.94■□□□□ 0.3
TRIO-223ENST00000515710 BOLA1Q9Y3E2 137 aa16.94■□□□□ 0.3
TRIO-223ENST00000515710 POLEQ07864 2286 aa16.94■□□□□ 0.3
TRIO-223ENST00000515710 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.94■□□□□ 0.3
TRIO-223ENST00000515710 CD55P08174 381 aa16.94■□□□□ 0.3
TRIO-223ENST00000515710 KCNJ3P48549 501 aa16.94■□□□□ 0.3
TRIO-223ENST00000515710 IL13RA1P78552 427 aa16.94■□□□□ 0.3
TRIO-223ENST00000515710 C4orf17Q53FE4 359 aa16.94■□□□□ 0.3
TRIO-223ENST00000515710 BEX5Q5H9J7 111 aa16.94■□□□□ 0.3
TRIO-223ENST00000515710 DMRTC2Q8IXT2 367 aaPredicted RBP16.94■□□□□ 0.3
TRIO-223ENST00000515710 SLC38A6Q8IZM9 456 aa16.94■□□□□ 0.3
TRIO-223ENST00000515710 LHBP01229 141 aa16.93■□□□□ 0.3
TRIO-223ENST00000515710 CTSDP07339 412 aaPredicted RBP16.93■□□□□ 0.3
TRIO-223ENST00000515710 FCGR2CP31995 323 aa16.93■□□□□ 0.3
TRIO-223ENST00000515710 SERPINF1P36955 418 aa16.93■□□□□ 0.3
TRIO-223ENST00000515710 CDSNQ15517 529 aa16.93■□□□□ 0.3
TRIO-223ENST00000515710 GCSAMQ8N6F7 178 aa16.93■□□□□ 0.3
TRIO-223ENST00000515710 UXS1Q8NBZ7 420 aa16.93■□□□□ 0.3
TRIO-223ENST00000515710 PLPPR1Q8TBJ4 325 aa16.93■□□□□ 0.3
TRIO-223ENST00000515710 DLL4Q9NR61 685 aa16.93■□□□□ 0.3
TRIO-223ENST00000515710 AUP1Q9Y679 476 aa16.93■□□□□ 0.3
TRIO-223ENST00000515710 RP1L1Q8IWN7 2480 aaPredicted RBP16.93■□□□□ 0.3
TRIO-223ENST00000515710 TUBAL3A6NHL2 446 aa16.92■□□□□ 0.3
TRIO-223ENST00000515710 RFPL4AA6NLU0 287 aa16.92■□□□□ 0.3
TRIO-223ENST00000515710 C17orf100A8MU93 164 aa16.92■□□□□ 0.3
TRIO-223ENST00000515710 E7EQL1 145 aa16.92■□□□□ 0.3
TRIO-223ENST00000515710 RFPL4AL1F8VTS6 287 aa16.92■□□□□ 0.3
TRIO-223ENST00000515710 SCTP09683 121 aa16.92■□□□□ 0.3
TRIO-223ENST00000515710 GRNP28799 593 aaKnown RBP16.92■□□□□ 0.3
TRIO-223ENST00000515710 CD34P28906 385 aa16.92■□□□□ 0.3
TRIO-223ENST00000515710 UCP3P55916 312 aa16.92■□□□□ 0.3
TRIO-223ENST00000515710 SPRNQ5BIV9 151 aa16.92■□□□□ 0.3
TRIO-223ENST00000515710 C20orf204Q6ZNR8 217 aa16.92■□□□□ 0.3
TRIO-223ENST00000515710 OR4A4PQ8NGN8 299 aa16.92■□□□□ 0.3
TRIO-223ENST00000515710 MITD1Q8WV92 249 aa16.92■□□□□ 0.3
TRIO-223ENST00000515710 TMEM230Q96A57 120 aa16.92■□□□□ 0.3
TRIO-223ENST00000515710 LIME1Q9H400 295 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms