RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 ETV6P41212 452 aa12.61□□□□□ -0.39
TRIO-222ENST00000515144 INO80CQ6PI98 192 aaPredicted RBP12.61□□□□□ -0.39
TRIO-222ENST00000515144 BTNL8Q6UX41 500 aa12.61□□□□□ -0.39
TRIO-222ENST00000515144 LYG2Q86SG7 212 aa12.61□□□□□ -0.39
TRIO-222ENST00000515144 OR4F17Q8NGA8 305 aa12.61□□□□□ -0.39
TRIO-222ENST00000515144 SIGLEC12Q96PQ1 595 aa12.61□□□□□ -0.39
TRIO-222ENST00000515144 UFC1Q9Y3C8 167 aa12.61□□□□□ -0.39
TRIO-222ENST00000515144 PPIAL4AQ9Y536 164 aa12.61□□□□□ -0.39
TRIO-222ENST00000515144 C3orf85A0A1B0GTC6 90 aa12.61□□□□□ -0.39
TRIO-222ENST00000515144 A0A1B0GUH1 482 aa12.61□□□□□ -0.39
TRIO-222ENST00000515144 A0A1W2PN81 502 aa12.61□□□□□ -0.39
TRIO-222ENST00000515144 CGB1A6NKQ9 187 aa12.61□□□□□ -0.39
TRIO-222ENST00000515144 GNG7O60262 68 aa12.61□□□□□ -0.39
TRIO-222ENST00000515144 CHRNA7P36544 502 aa12.61□□□□□ -0.39
TRIO-222ENST00000515144 MDH2P40926 338 aaKnown RBP12.61□□□□□ -0.39
TRIO-222ENST00000515144 PHYHD1Q5SRE7 291 aa12.61□□□□□ -0.39
TRIO-222ENST00000515144 C17orf47Q8NEP4 570 aa12.61□□□□□ -0.39
TRIO-222ENST00000515144 SLC16A12Q6ZSM3 486 aa12.61□□□□□ -0.39
TRIO-222ENST00000515144 BCL2L2Q92843 193 aaPredicted RBP12.61□□□□□ -0.39
TRIO-222ENST00000515144 PRR33A8MZF0 331 aa12.61□□□□□ -0.39
TRIO-222ENST00000515144 AHRRA9YTQ3 701 aa12.61□□□□□ -0.39
TRIO-222ENST00000515144 SOCS1O15524 211 aa12.61□□□□□ -0.39
TRIO-222ENST00000515144 FAM214BQ7L5A3 538 aa12.61□□□□□ -0.39
TRIO-222ENST00000515144 SPICQ8N5J4 248 aa12.61□□□□□ -0.39
TRIO-222ENST00000515144 P2RX4Q99571 388 aa12.61□□□□□ -0.39
TRIO-222ENST00000515144 HS3ST3B1Q9Y662 390 aa12.61□□□□□ -0.39
TRIO-222ENST00000515144 XKRY2A2RUG3 117 aa12.61□□□□□ -0.39
TRIO-222ENST00000515144 COX6A1P12074 109 aa12.61□□□□□ -0.39
TRIO-222ENST00000515144 UCP2P55851 309 aa12.61□□□□□ -0.39
TRIO-222ENST00000515144 UQCC2Q9BRT2 126 aa12.61□□□□□ -0.39
TRIO-222ENST00000515144 EVX1P49640 407 aa12.61□□□□□ -0.39
TRIO-222ENST00000515144 PNLIPRP3Q17RR3 467 aa12.61□□□□□ -0.39
TRIO-222ENST00000515144 ZNF826PQ6ZT77 177 aa12.61□□□□□ -0.39
TRIO-222ENST00000515144 PECRQ9BY49 303 aa12.61□□□□□ -0.39
TRIO-222ENST00000515144 COL4A6Q14031 1691 aa12.6□□□□□ -0.39
TRIO-222ENST00000515144 FXYD1O00168 92 aa12.6□□□□□ -0.39
TRIO-222ENST00000515144 DNPH1O43598 174 aa12.6□□□□□ -0.39
TRIO-222ENST00000515144 FPR2P25090 351 aa12.6□□□□□ -0.39
TRIO-222ENST00000515144 ZNF90Q03938 601 aa12.6□□□□□ -0.39
TRIO-222ENST00000515144 FAM219AQ8IW50 185 aa12.6□□□□□ -0.39
TRIO-222ENST00000515144 CTDSP1Q9GZU7 261 aa12.6□□□□□ -0.39
TRIO-222ENST00000515144 GPR27Q9NS67 375 aa12.6□□□□□ -0.39
TRIO-222ENST00000515144 TRAV1-2A0A0B4J238 106 aa12.6□□□□□ -0.39
TRIO-222ENST00000515144 PF4V1P10720 104 aa12.6□□□□□ -0.39
TRIO-222ENST00000515144 MGAT2Q10469 447 aa12.6□□□□□ -0.39
TRIO-222ENST00000515144 MSRB3Q8IXL7 192 aa12.6□□□□□ -0.39
TRIO-222ENST00000515144 OR5AP2Q8NGF4 316 aa12.6□□□□□ -0.39
TRIO-222ENST00000515144 HARBI1Q96MB7 349 aa12.6□□□□□ -0.39
TRIO-222ENST00000515144 SMIM18P0DKX4 95 aa12.6□□□□□ -0.39
TRIO-222ENST00000515144 LINC00303Q3SY05 128 aa12.6□□□□□ -0.39
TRIO-222ENST00000515144 OR8D4Q8NGM9 314 aa12.6□□□□□ -0.39
TRIO-222ENST00000515144 HEATR5AQ86XA9 2040 aa12.6□□□□□ -0.39
TRIO-222ENST00000515144 ZNF727A8MUV8 499 aa12.6□□□□□ -0.39
TRIO-222ENST00000515144 MMDQ15546 238 aa12.6□□□□□ -0.39
TRIO-222ENST00000515144 C4orf17Q53FE4 359 aa12.6□□□□□ -0.39
TRIO-222ENST00000515144 CLPPQ16740 277 aaPredicted RBP12.6□□□□□ -0.39
TRIO-222ENST00000515144 ACSF3Q4G176 576 aaPredicted RBP12.6□□□□□ -0.39
TRIO-222ENST00000515144 TBC1D26Q86UD7 250 aa12.6□□□□□ -0.39
TRIO-222ENST00000515144 DIRC2Q96SL1 478 aa12.6□□□□□ -0.39
TRIO-222ENST00000515144 ARL2-SNX15V9GYD0 113 aa12.6□□□□□ -0.39
TRIO-222ENST00000515144 JTBO76095 146 aa12.59□□□□□ -0.39
TRIO-222ENST00000515144 ACP1P24666 158 aa12.59□□□□□ -0.39
TRIO-222ENST00000515144 PLAC1Q9HBJ0 212 aa12.59□□□□□ -0.39
TRIO-222ENST00000515144 SIRT7Q9NRC8 400 aa12.59□□□□□ -0.39
TRIO-222ENST00000515144 COX5AP20674 150 aa12.59□□□□□ -0.39
TRIO-222ENST00000515144 ZBTB37Q5TC79 503 aa12.59□□□□□ -0.39
TRIO-222ENST00000515144 TERB2Q8NHR7 220 aa12.59□□□□□ -0.39
TRIO-222ENST00000515144 SF3B5Q9BWJ5 86 aaKnown RBP12.59□□□□□ -0.39
TRIO-222ENST00000515144 FGF8P55075 233 aaPredicted RBP12.59□□□□□ -0.39
TRIO-222ENST00000515144 MRM1Q6IN84 353 aaKnown RBP12.59□□□□□ -0.39
TRIO-222ENST00000515144 ITLN1Q8WWA0 313 aa12.59□□□□□ -0.39
TRIO-222ENST00000515144 CDK2AP1O14519 115 aa12.59□□□□□ -0.39
TRIO-222ENST00000515144 AKR1C3P42330 323 aa12.59□□□□□ -0.39
TRIO-222ENST00000515144 ARF6P62330 175 aa12.59□□□□□ -0.39
TRIO-222ENST00000515144 LEAP2Q969E1 77 aa12.59□□□□□ -0.39
TRIO-222ENST00000515144 C2orf50Q96LR7 162 aa12.59□□□□□ -0.39
TRIO-222ENST00000515144 AKIRIN1Q9H9L7 192 aaPredicted RBP12.59□□□□□ -0.39
TRIO-222ENST00000515144 NTN4Q9HB63 628 aa12.59□□□□□ -0.39
TRIO-222ENST00000515144 SLC2A8Q9NY64 477 aa12.59□□□□□ -0.39
TRIO-222ENST00000515144 A0A1W2PQD3 144 aa12.59□□□□□ -0.39
TRIO-222ENST00000515144 ANKRD34CP0C6C1 535 aa12.59□□□□□ -0.39
TRIO-222ENST00000515144 LSM11P83369 360 aaKnown RBP eCLIP12.59□□□□□ -0.39
TRIO-222ENST00000515144 ZNF239Q16600 458 aaKnown RBP12.59□□□□□ -0.39
TRIO-222ENST00000515144 DCTN5Q9BTE1 182 aa12.59□□□□□ -0.39
TRIO-222ENST00000515144 MRM2Q9UI43 246 aaKnown RBP12.59□□□□□ -0.39
TRIO-222ENST00000515144 PDCD6O75340 191 aa12.59□□□□□ -0.39
TRIO-222ENST00000515144 SLC7A10Q9NS82 523 aa12.59□□□□□ -0.39
TRIO-222ENST00000515144 MPC1Q9Y5U8 109 aa12.59□□□□□ -0.39
TRIO-222ENST00000515144 TRDCB7Z8K6 153 aa12.58□□□□□ -0.39
TRIO-222ENST00000515144 CLDN14O95500 239 aa12.58□□□□□ -0.39
TRIO-222ENST00000515144 C12orf73Q69YU5 71 aa12.58□□□□□ -0.39
TRIO-222ENST00000515144 TMEM229BQ8NBD8 167 aa12.58□□□□□ -0.39
TRIO-222ENST00000515144 RELL2Q8NC24 303 aaPredicted RBP12.58□□□□□ -0.39
TRIO-222ENST00000515144 WDR89Q96FK6 387 aaPredicted RBP12.58□□□□□ -0.39
TRIO-222ENST00000515144 PCNX2A6NKB5 2137 aa12.58□□□□□ -0.39
TRIO-222ENST00000515144 IGKV3D-15A0A087WSY6 115 aa12.58□□□□□ -0.4
TRIO-222ENST00000515144 IGKV3-15P01624 115 aa12.58□□□□□ -0.4
TRIO-222ENST00000515144 G6PCP35575 357 aa12.58□□□□□ -0.4
TRIO-222ENST00000515144 PMELP40967 661 aa12.58□□□□□ -0.4
TRIO-222ENST00000515144 CDC34P49427 236 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms