RNA–Protein interactions for RNA: ENST00000513248.1

NUP54-212, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-212ENST00000513248 ZNRF1Q8ND25 227 aa2.87□□□□□ -1.95
NUP54-212ENST00000513248 OR2T33Q8NG76 320 aa2.87□□□□□ -1.95
NUP54-212ENST00000513248 OR9Q1Q8NGQ5 310 aa2.87□□□□□ -1.95
NUP54-212ENST00000513248 OR13C5Q8NGS8 318 aa2.87□□□□□ -1.95
NUP54-212ENST00000513248 OR11L1Q8NGX0 322 aa2.87□□□□□ -1.95
NUP54-212ENST00000513248 OR13G1Q8NGZ3 307 aa2.87□□□□□ -1.95
NUP54-212ENST00000513248 OR2T29Q8NH02 315 aa2.87□□□□□ -1.95
NUP54-212ENST00000513248 OR8S1Q8NH09 359 aa2.87□□□□□ -1.95
NUP54-212ENST00000513248 ZNF418Q8TF45 676 aaPredicted RBP2.87□□□□□ -1.95
NUP54-212ENST00000513248 GIPC3Q8TF64 312 aa2.87□□□□□ -1.95
NUP54-212ENST00000513248 ITLN1Q8WWA0 313 aa2.87□□□□□ -1.95
NUP54-212ENST00000513248 SLC7A6Q92536 515 aa2.87□□□□□ -1.95
NUP54-212ENST00000513248 RASL10AQ92737 203 aa2.87□□□□□ -1.95
NUP54-212ENST00000513248 POP5Q969H6 163 aaKnown RBP2.87□□□□□ -1.95
NUP54-212ENST00000513248 RFT1Q96AA3 541 aa2.87□□□□□ -1.95
NUP54-212ENST00000513248 C7orf34Q96L11 122 aa2.87□□□□□ -1.95
NUP54-212ENST00000513248 ZNF75AQ96N20 296 aa2.87□□□□□ -1.95
NUP54-212ENST00000513248 CHCHD5Q9BSY4 110 aa2.87□□□□□ -1.95
NUP54-212ENST00000513248 OR51V1Q9H2C8 321 aa2.87□□□□□ -1.95
NUP54-212ENST00000513248 ZNF665Q9H7R5 613 aa2.87□□□□□ -1.95
NUP54-212ENST00000513248 SP140LQ9H930 580 aa2.87□□□□□ -1.95
NUP54-212ENST00000513248 WDR76Q9H967 626 aa2.87□□□□□ -1.95
NUP54-212ENST00000513248 GPN1Q9HCN4 374 aaPredicted RBP2.87□□□□□ -1.95
NUP54-212ENST00000513248 TUBG2Q9NRH3 451 aa2.87□□□□□ -1.95
NUP54-212ENST00000513248 TMEM100Q9NV29 134 aa2.87□□□□□ -1.95
NUP54-212ENST00000513248 THYN1Q9P016 225 aa2.87□□□□□ -1.95
NUP54-212ENST00000513248 ACTR3BQ9P1U1 418 aa2.87□□□□□ -1.95
NUP54-212ENST00000513248 OR5V1Q9UGF6 321 aa2.87□□□□□ -1.95
NUP54-212ENST00000513248 KLHL21Q9UJP4 597 aa2.87□□□□□ -1.95
NUP54-212ENST00000513248 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.87□□□□□ -1.95
NUP54-212ENST00000513248 PRPF19Q9UMS4 504 aaKnown RBP2.87□□□□□ -1.95
NUP54-212ENST00000513248 B9D1Q9UPM9 204 aa2.87□□□□□ -1.95
NUP54-212ENST00000513248 BAIAP2Q9UQB8 552 aa2.87□□□□□ -1.95
NUP54-212ENST00000513248 STARD10Q9Y365 291 aa2.87□□□□□ -1.95
NUP54-212ENST00000513248 NOP16Q9Y3C1 178 aaKnown RBP2.87□□□□□ -1.95
NUP54-212ENST00000513248 CACNG2Q9Y698 323 aa2.87□□□□□ -1.95
NUP54-212ENST00000513248 CDH10Q9Y6N8 788 aa2.87□□□□□ -1.95
NUP54-212ENST00000513248 NUP214P35658 2090 aaPredicted RBP2.86□□□□□ -1.95
NUP54-212ENST00000513248 A0A096LNT2 108 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 A0A0G2JMP0 313 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 A0A0X1KG70 313 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 ACOD1A6NK06 481 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 ANKRD30BLA7E2S9 258 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 M0R135 149 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 ARPC3O15145 178 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 SYT7O43581 403 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 CIB2O75838 187 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 TXNDC12O95881 172 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 CYB5R3P00387 301 aaPredicted RBP2.86□□□□□ -1.95
NUP54-212ENST00000513248 PNPP00491 289 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 APOC1P02654 83 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 GYPBP06028 91 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 HCKP08631 526 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 H2BFMP0C1H6 154 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 TSPAN19P0C672 248 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 RPS2P15880 293 aaKnown RBP2.86□□□□□ -1.95
NUP54-212ENST00000513248 GSSP48637 474 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 FHITP49789 147 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 ERFP50548 548 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 PRKXP51817 358 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 BLVRAP53004 296 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 GNB2P62879 340 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 SRPXP78539 464 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 CBX1P83916 185 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 PSG7Q13046 419 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 EIF2B1Q14232 305 aaKnown RBP2.86□□□□□ -1.95
NUP54-212ENST00000513248 FLOT2Q14254 428 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 OR8B8Q15620 311 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 MICAQ29983 383 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 CCDC92Q53HC0 331 aaPredicted RBP2.86□□□□□ -1.95
NUP54-212ENST00000513248 C9orf66Q5T8R8 295 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 BTNL3Q6UXE8 466 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 C12orf54Q6X4T0 127 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 ZNF620Q6ZNG0 422 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 RASSF6Q6ZTQ3 369 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 PGAP1Q75T13 922 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 TRPM8Q7Z2W7 1104 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 FAM122BQ7Z309 247 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 DCXRQ7Z4W1 244 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 ERI1Q8IV48 349 aaKnown RBP2.86□□□□□ -1.95
NUP54-212ENST00000513248 OR6V1Q8N148 313 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 POM121L12Q8N7R1 296 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 DEFB108BQ8NET1 73 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 OR8G5Q8NG78 346 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 OR4M2Q8NGB6 313 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 OR10G2Q8NGC3 310 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 OR10AD1Q8NGE0 317 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 OR8B3Q8NGG8 313 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 OR51L1Q8NGJ5 315 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 OR6N2Q8NGY6 317 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 OR6F1Q8NGZ6 308 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 NANPQ8TBE9 248 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 THEM6Q8WUY1 208 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 SLCO4A1Q96BD0 722 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 HAVCR1Q96D42 359 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 ZNF799Q96GE5 643 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 OR2V2Q96R30 315 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 OR8B2Q96RD0 313 aa2.86□□□□□ -1.95
NUP54-212ENST00000513248 GPX7Q96SL4 187 aaPredicted RBP2.86□□□□□ -1.95
NUP54-212ENST00000513248 COQ7Q99807 217 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms