RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 WNT4P56705 351 aa7.17□□□□□ -1.26
NUP54-211ENST00000512151 ACTA2P62736 377 aa7.17□□□□□ -1.26
NUP54-211ENST00000512151 ACTG2P63267 376 aa7.17□□□□□ -1.26
NUP54-211ENST00000512151 ZNF273Q14593 569 aa7.17□□□□□ -1.26
NUP54-211ENST00000512151 ZNF260Q3ZCT1 412 aa7.17□□□□□ -1.26
NUP54-211ENST00000512151 ZNF626Q68DY1 528 aa7.17□□□□□ -1.26
NUP54-211ENST00000512151 FDX2Q6P4F2 183 aa7.17□□□□□ -1.26
NUP54-211ENST00000512151 KCTD20Q7Z5Y7 419 aa7.17□□□□□ -1.26
NUP54-211ENST00000512151 ZNF695Q8IW36 515 aa7.17□□□□□ -1.26
NUP54-211ENST00000512151 ZFP41Q8N8Y5 198 aa7.17□□□□□ -1.26
NUP54-211ENST00000512151 TMEM185AQ8NFB2 350 aa7.17□□□□□ -1.26
NUP54-211ENST00000512151 KRTAP4-5Q9BYR2 181 aa7.17□□□□□ -1.26
NUP54-211ENST00000512151 PBOV1Q9GZY1 135 aa7.17□□□□□ -1.26
NUP54-211ENST00000512151 TLNRD1Q9H1K6 362 aa7.17□□□□□ -1.26
NUP54-211ENST00000512151 NIPAL2Q9H841 368 aa7.17□□□□□ -1.26
NUP54-211ENST00000512151 ZNF222Q9UK12 451 aa7.17□□□□□ -1.26
NUP54-211ENST00000512151 OR52A1Q9UKL2 312 aa7.17□□□□□ -1.26
NUP54-211ENST00000512151 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.16□□□□□ -1.26
NUP54-211ENST00000512151 A0A1B0GTI1 187 aa7.16□□□□□ -1.26
NUP54-211ENST00000512151 OR4C45A6NMZ5 311 aa7.16□□□□□ -1.26
NUP54-211ENST00000512151 LOC110117498-PIK3R3F6TDL0 507 aa7.16□□□□□ -1.26
NUP54-211ENST00000512151 MYL12BO14950 172 aa7.16□□□□□ -1.26
NUP54-211ENST00000512151 TBX1O43435 398 aa7.16□□□□□ -1.26
NUP54-211ENST00000512151 AKR7A2O43488 359 aa7.16□□□□□ -1.26
NUP54-211ENST00000512151 CD36P16671 472 aa7.16□□□□□ -1.26
NUP54-211ENST00000512151 GABRA2P47869 451 aa7.16□□□□□ -1.26
NUP54-211ENST00000512151 OR3A4PP47883 348 aa7.16□□□□□ -1.26
NUP54-211ENST00000512151 ALKBH1Q13686 389 aaKnown RBP7.16□□□□□ -1.26
NUP54-211ENST00000512151 SPHARQ15513 63 aa7.16□□□□□ -1.26
NUP54-211ENST00000512151 MED22Q15528 200 aa7.16□□□□□ -1.26
NUP54-211ENST00000512151 ODF4Q2M2E3 257 aa7.16□□□□□ -1.26
NUP54-211ENST00000512151 ZNF829Q3KNS6 432 aaPredicted RBP7.16□□□□□ -1.26
NUP54-211ENST00000512151 DMKNQ6E0U4 476 aaPredicted RBP7.16□□□□□ -1.26
NUP54-211ENST00000512151 TMPRSS11AQ6ZMR5 421 aa7.16□□□□□ -1.26
NUP54-211ENST00000512151 ZNF367Q7RTV3 350 aa7.16□□□□□ -1.26
NUP54-211ENST00000512151 FAM220AQ7Z4H9 259 aa7.16□□□□□ -1.26
NUP54-211ENST00000512151 ELMOD2Q8IZ81 293 aa7.16□□□□□ -1.26
NUP54-211ENST00000512151 RDH10Q8IZV5 341 aa7.16□□□□□ -1.26
NUP54-211ENST00000512151 OR4M1Q8NGD0 313 aa7.16□□□□□ -1.26
NUP54-211ENST00000512151 OR5M8Q8NGP6 311 aa7.16□□□□□ -1.26
NUP54-211ENST00000512151 OR2G2Q8NGZ5 317 aa7.16□□□□□ -1.26
NUP54-211ENST00000512151 DYNC2LI1Q8TCX1 351 aa7.16□□□□□ -1.26
NUP54-211ENST00000512151 BORCS5Q969J3 196 aa7.16□□□□□ -1.26
NUP54-211ENST00000512151 PGAM5Q96HS1 289 aa7.16□□□□□ -1.26
NUP54-211ENST00000512151 NOL4LQ96MY1 436 aaPredicted RBP7.16□□□□□ -1.26
NUP54-211ENST00000512151 OPALINQ96PE5 141 aa7.16□□□□□ -1.26
NUP54-211ENST00000512151 MND1Q9BWT6 205 aa7.16□□□□□ -1.26
NUP54-211ENST00000512151 FGF23Q9GZV9 251 aaPredicted RBP7.16□□□□□ -1.26
NUP54-211ENST00000512151 CHCHD3Q9NX63 227 aaKnown RBP7.16□□□□□ -1.26
NUP54-211ENST00000512151 NUFIP1Q9UHK0 495 aaKnown RBP7.16□□□□□ -1.26
NUP54-211ENST00000512151 GTF2A1LQ9UNN4 478 aa7.16□□□□□ -1.26
NUP54-211ENST00000512151 ERGIC3Q9Y282 383 aa7.16□□□□□ -1.26
NUP54-211ENST00000512151 PNMA8CA0A1B0GUJ8 204 aa7.15□□□□□ -1.26
NUP54-211ENST00000512151 A0A1B0GVG6 124 aa7.15□□□□□ -1.26
NUP54-211ENST00000512151 ACOD1A6NK06 481 aa7.15□□□□□ -1.26
NUP54-211ENST00000512151 OR2AT4A6NND4 320 aa7.15□□□□□ -1.26
NUP54-211ENST00000512151 H3BSH0 61 aa7.15□□□□□ -1.26
NUP54-211ENST00000512151 LDLRAD4O15165 306 aa7.15□□□□□ -1.26
NUP54-211ENST00000512151 LY6G6CO95867 125 aa7.15□□□□□ -1.26
NUP54-211ENST00000512151 APOC1P02654 83 aa7.15□□□□□ -1.26
NUP54-211ENST00000512151 PGA5P0DJD9 388 aa7.15□□□□□ -1.26
NUP54-211ENST00000512151 SLC6A1P30531 599 aa7.15□□□□□ -1.26
NUP54-211ENST00000512151 CCR9P51686 369 aa7.15□□□□□ -1.26
NUP54-211ENST00000512151 GBX2P52951 348 aaPredicted RBP7.15□□□□□ -1.26
NUP54-211ENST00000512151 RPL31P62899 125 aaKnown RBP7.15□□□□□ -1.26
NUP54-211ENST00000512151 FAM3AP98173 230 aa7.15□□□□□ -1.26
NUP54-211ENST00000512151 MZT1Q08AG7 82 aa7.15□□□□□ -1.26
NUP54-211ENST00000512151 CDK5R1Q15078 307 aa7.15□□□□□ -1.26
NUP54-211ENST00000512151 TIGD6Q17RP2 521 aa7.15□□□□□ -1.26
NUP54-211ENST00000512151 C9orf152Q5JTZ5 239 aa7.15□□□□□ -1.26
NUP54-211ENST00000512151 RPP25LQ8N5L8 163 aaKnown RBP7.15□□□□□ -1.26
NUP54-211ENST00000512151 OR11H6Q8NGC7 330 aa7.15□□□□□ -1.26
NUP54-211ENST00000512151 OR10AC1Q8NH08 325 aa7.15□□□□□ -1.26
NUP54-211ENST00000512151 OR8S1Q8NH09 359 aa7.15□□□□□ -1.26
NUP54-211ENST00000512151 OR51E1Q8TCB6 317 aa7.15□□□□□ -1.26
NUP54-211ENST00000512151 RGP1Q92546 391 aaPredicted RBP7.15□□□□□ -1.26
NUP54-211ENST00000512151 RPL3LQ92901 407 aaKnown RBP7.15□□□□□ -1.26
NUP54-211ENST00000512151 SPSB4Q96A44 273 aa7.15□□□□□ -1.26
NUP54-211ENST00000512151 MRPL48Q96GC5 212 aaKnown RBP7.15□□□□□ -1.26
NUP54-211ENST00000512151 PGLYRP3Q96LB9 341 aa7.15□□□□□ -1.26
NUP54-211ENST00000512151 PDCD1LG2Q9BQ51 273 aa7.15□□□□□ -1.26
NUP54-211ENST00000512151 SLC25A33Q9BSK2 321 aa7.15□□□□□ -1.26
NUP54-211ENST00000512151 LIN7BQ9HAP6 207 aa7.15□□□□□ -1.26
NUP54-211ENST00000512151 ZFP57Q9NU63 452 aa7.15□□□□□ -1.26
NUP54-211ENST00000512151 NLKQ9UBE8 527 aa7.15□□□□□ -1.26
NUP54-211ENST00000512151 TRBV2A0A0J9YWF9 115 aa7.14□□□□□ -1.27
NUP54-211ENST00000512151 hCG_38984A0A1B0GV85 526 aa7.14□□□□□ -1.27
NUP54-211ENST00000512151 MEX3AA1L020 520 aaKnown RBP7.14□□□□□ -1.27
NUP54-211ENST00000512151 C17orf98A8MV24 154 aa7.14□□□□□ -1.27
NUP54-211ENST00000512151 PSG2P11465 335 aa7.14□□□□□ -1.27
NUP54-211ENST00000512151 ACKR3P25106 362 aa7.14□□□□□ -1.27
NUP54-211ENST00000512151 SERPINB10P48595 397 aa7.14□□□□□ -1.27
NUP54-211ENST00000512151 SSX1Q16384 188 aa7.14□□□□□ -1.27
NUP54-211ENST00000512151 GFOD2Q3B7J2 385 aa7.14□□□□□ -1.27
NUP54-211ENST00000512151 CCDC58Q4VC31 144 aa7.14□□□□□ -1.27
NUP54-211ENST00000512151 BCL2L15Q5TBC7 163 aa7.14□□□□□ -1.27
NUP54-211ENST00000512151 RPL22L1Q6P5R6 122 aaKnown RBP7.14□□□□□ -1.27
NUP54-211ENST00000512151 Q6ZSR3 168 aa7.14□□□□□ -1.27
NUP54-211ENST00000512151 LCNL1Q6ZST4 164 aa7.14□□□□□ -1.27
NUP54-211ENST00000512151 C16orf82Q7Z2V1 217 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms