RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 TSPAN9O75954 239 aa9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 CGB3P0DN86 165 aa9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 CGB7P0DN87 165 aa9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 GDNFP39905 211 aa9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 PAX5Q02548 391 aa9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 SRSF4Q08170 494 aaKnown RBP9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 LY6EQ16553 131 aa9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 C17orf58Q2M2W7 97 aa9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 PAN3Q58A45 887 aaKnown RBP9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 PRAMEF5Q5TYX0 476 aa9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 HEPN1Q6WQI6 88 aa9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 LYPD6Q86Y78 171 aa9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 MYDGFQ969H8 173 aa9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 MND1Q9BWT6 205 aa9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 NCOR1P1Q9H4R4 102 aa9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 DUSP21Q9H596 190 aa9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 ING3Q9NXR8 418 aa9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 ST3GAL6Q9Y274 331 aa9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 A0A1W2PP11 408 aa9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 H0YHG0 523 aa9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 HSPB6O14558 160 aa9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 SERPINA2P20848 420 aa9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 CDK2P24941 298 aa9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 GP2P55259 537 aaKnown RBP9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 RBM11P57052 281 aaKnown RBP9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 PROK1P58294 105 aa9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 KRTAP10-3P60369 221 aa9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 DYNC1I2Q13409 638 aaKnown RBP9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 INSL4Q14641 139 aa9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 SPHARQ15513 63 aa9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 MINOS1Q5TGZ0 78 aa9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 RSBN1Q5VWQ0 802 aaPredicted RBP9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 UNQ9370/PRO34162Q6UXP9 181 aa9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 CDH26Q8IXH8 852 aa9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 OSR2Q8N2R0 312 aa9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 PLPPR1Q8TBJ4 325 aa9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 FOXRED1Q96CU9 486 aaPredicted RBP9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 CLEC7AQ9BXN2 247 aa9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 GAL3ST2Q9H3Q3 398 aa9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 IFT22Q9H7X7 185 aa9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 KIF25Q9UIL4 384 aa9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 RNF114Q9Y508 228 aa9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 MINOS1-NBL1R4GNA1 71 aa9.39□□□□□ -0.91
SH3RF1-205ENST00000511421 ZNF729A6NN14 1252 aaPredicted RBP9.38□□□□□ -0.91
SH3RF1-205ENST00000511421 GEMIN2O14893 280 aaKnown RBP9.38□□□□□ -0.91
SH3RF1-205ENST00000511421 ZNF780AO75290 641 aaPredicted RBP9.38□□□□□ -0.91
SH3RF1-205ENST00000511421 CSTBP04080 98 aaKnown RBP9.38□□□□□ -0.91
SH3RF1-205ENST00000511421 CD34P28906 385 aa9.38□□□□□ -0.91
SH3RF1-205ENST00000511421 RAB13P51153 203 aa9.38□□□□□ -0.91
SH3RF1-205ENST00000511421 SSX2Q16385 188 aa9.38□□□□□ -0.91
SH3RF1-205ENST00000511421 SLC22A6Q4U2R8 563 aa9.38□□□□□ -0.91
SH3RF1-205ENST00000511421 UTF1Q5T230 341 aa9.38□□□□□ -0.91
SH3RF1-205ENST00000511421 SLC35E4Q6ICL7 350 aa9.38□□□□□ -0.91
SH3RF1-205ENST00000511421 OR52W1Q6IF63 320 aa9.38□□□□□ -0.91
SH3RF1-205ENST00000511421 IZUMO2Q6UXV1 221 aa9.38□□□□□ -0.91
SH3RF1-205ENST00000511421 ABHD12Q8N2K0 398 aa9.38□□□□□ -0.91
SH3RF1-205ENST00000511421 MS4A15Q8N5U1 240 aa9.38□□□□□ -0.91
SH3RF1-205ENST00000511421 SUMF2Q8NBJ7 301 aa9.38□□□□□ -0.91
SH3RF1-205ENST00000511421 OR4P4Q8NGL7 312 aa9.38□□□□□ -0.91
SH3RF1-205ENST00000511421 MUL1Q969V5 352 aa9.38□□□□□ -0.91
SH3RF1-205ENST00000511421 DPCDQ9BVM2 203 aaPredicted RBP9.38□□□□□ -0.91
SH3RF1-205ENST00000511421 VCX3BQ9H321 246 aa9.38□□□□□ -0.91
SH3RF1-205ENST00000511421 OR6C3Q9NZP0 311 aa9.38□□□□□ -0.91
SH3RF1-205ENST00000511421 TPRKBQ9Y3C4 175 aa9.38□□□□□ -0.91
SH3RF1-205ENST00000511421 A0A087X0M5 115 aa9.37□□□□□ -0.91
SH3RF1-205ENST00000511421 KBTBD11-OT1A0A1B0GTJ5 212 aa9.37□□□□□ -0.91
SH3RF1-205ENST00000511421 A0A1B0GX30 115 aa9.37□□□□□ -0.91
SH3RF1-205ENST00000511421 CHST1O43916 411 aa9.37□□□□□ -0.91
SH3RF1-205ENST00000511421 OR7C1O76099 320 aaPredicted RBP9.37□□□□□ -0.91
SH3RF1-205ENST00000511421 MAS1P04201 325 aa9.37□□□□□ -0.91
SH3RF1-205ENST00000511421 JUNBP17275 347 aaPredicted RBP9.37□□□□□ -0.91
SH3RF1-205ENST00000511421 CRHBPP24387 322 aa9.37□□□□□ -0.91
SH3RF1-205ENST00000511421 KCNJ3P48549 501 aa9.37□□□□□ -0.91
SH3RF1-205ENST00000511421 FAM189A2Q15884 450 aa9.37□□□□□ -0.91
SH3RF1-205ENST00000511421 ACSM3Q53FZ2 586 aa9.37□□□□□ -0.91
SH3RF1-205ENST00000511421 PLA1AQ53H76 456 aa9.37□□□□□ -0.91
SH3RF1-205ENST00000511421 PRR31Q5SQ13 230 aa9.37□□□□□ -0.91
SH3RF1-205ENST00000511421 GLIPR1L1Q6UWM5 242 aa9.37□□□□□ -0.91
SH3RF1-205ENST00000511421 CCBE1Q6UXH8 406 aaPredicted RBP9.37□□□□□ -0.91
SH3RF1-205ENST00000511421 RTN4RL2Q86UN3 420 aa9.37□□□□□ -0.91
SH3RF1-205ENST00000511421 JAGN1Q8N5M9 183 aa9.37□□□□□ -0.91
SH3RF1-205ENST00000511421 OR4D6Q8NGJ1 314 aa9.37□□□□□ -0.91
SH3RF1-205ENST00000511421 OR13A1Q8NGR1 328 aa9.37□□□□□ -0.91
SH3RF1-205ENST00000511421 THRSPQ92748 146 aa9.37□□□□□ -0.91
SH3RF1-205ENST00000511421 S100A13Q99584 98 aa9.37□□□□□ -0.91
SH3RF1-205ENST00000511421 CITED1Q99966 193 aa9.37□□□□□ -0.91
SH3RF1-205ENST00000511421 BARHL1Q9BZE3 327 aa9.37□□□□□ -0.91
SH3RF1-205ENST00000511421 ZNF696Q9H7X3 374 aa9.37□□□□□ -0.91
SH3RF1-205ENST00000511421 LINC00574Q9H8X3 128 aa9.37□□□□□ -0.91
SH3RF1-205ENST00000511421 ZNF286AQ9HBT8 521 aa9.37□□□□□ -0.91
SH3RF1-205ENST00000511421 MRPS28Q9Y2Q9 187 aaKnown RBP9.37□□□□□ -0.91
SH3RF1-205ENST00000511421 HILPDAQ9Y5L2 63 aa9.37□□□□□ -0.91
SH3RF1-205ENST00000511421 MEIKINA0A087WXM9 373 aa9.36□□□□□ -0.91
SH3RF1-205ENST00000511421 FAM172BPA6NC97 362 aa9.36□□□□□ -0.91
SH3RF1-205ENST00000511421 SC5DO75845 299 aa9.36□□□□□ -0.91
SH3RF1-205ENST00000511421 IGLV1-47P01700 117 aa9.36□□□□□ -0.91
SH3RF1-205ENST00000511421 GTF2F2P13984 249 aa9.36□□□□□ -0.91
SH3RF1-205ENST00000511421 MAPK3P27361 379 aaPredicted RBP9.36□□□□□ -0.91
SH3RF1-205ENST00000511421 DYNLT3P51808 116 aa9.36□□□□□ -0.91
SH3RF1-205ENST00000511421 GPR50Q13585 617 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms