RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 IL18Q14116 193 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 KCNJ8Q15842 424 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 FAM189A2Q15884 450 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 NHLRC3Q5JS37 347 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 RAB12Q6IQ22 244 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 TREML4Q6UXN2 200 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 Q6YL49 198 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 LYSMD2Q8IV50 215 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 OR5D18Q8NGL1 313 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 SMIM4Q8WVI0 70 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 MRPS24Q96EL2 167 aaKnown RBP12.05□□□□□ -0.48
HMGCL-208ENST00000509389 TBX15Q96SF7 602 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 MICU1Q9BPX6 476 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 TMEM59Q9BXS4 323 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 RHOFQ9HBH0 211 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.05□□□□□ -0.48
HMGCL-208ENST00000509389 C1orf123Q9NWV4 160 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 A0A1W2PP11 408 aa12.04□□□□□ -0.48
HMGCL-208ENST00000509389 OOEPA6NGQ2 149 aa12.04□□□□□ -0.48
HMGCL-208ENST00000509389 ZNF732B4DXR9 585 aa12.04□□□□□ -0.48
HMGCL-208ENST00000509389 AKR7A2O43488 359 aa12.04□□□□□ -0.48
HMGCL-208ENST00000509389 LIPFP07098 398 aa12.04□□□□□ -0.48
HMGCL-208ENST00000509389 GRPP07492 148 aa12.04□□□□□ -0.48
HMGCL-208ENST00000509389 MMP9P14780 707 aa12.04□□□□□ -0.48
HMGCL-208ENST00000509389 GPM6AP51674 278 aa12.04□□□□□ -0.48
HMGCL-208ENST00000509389 GPR176Q14439 515 aa12.04□□□□□ -0.48
HMGCL-208ENST00000509389 BAK1Q16611 211 aa12.04□□□□□ -0.48
HMGCL-208ENST00000509389 TMEM69Q5SWH9 247 aa12.04□□□□□ -0.48
HMGCL-208ENST00000509389 STEAP3Q658P3 488 aa12.04□□□□□ -0.48
HMGCL-208ENST00000509389 ZNF826PQ6ZT77 177 aa12.04□□□□□ -0.48
HMGCL-208ENST00000509389 ZNF573Q86YE8 665 aa12.04□□□□□ -0.48
HMGCL-208ENST00000509389 SPERTQ8NA61 448 aa12.04□□□□□ -0.48
HMGCL-208ENST00000509389 C15orf40Q8WUR7 153 aa12.04□□□□□ -0.48
HMGCL-208ENST00000509389 Q96M66 194 aa12.04□□□□□ -0.48
HMGCL-208ENST00000509389 RBMX2Q9Y388 322 aaKnown RBP12.04□□□□□ -0.48
HMGCL-208ENST00000509389 TRAV38-1A0A0B4J264 116 aa12.03□□□□□ -0.48
HMGCL-208ENST00000509389 CENPVL3A0A0U1RRI6 287 aa12.03□□□□□ -0.48
HMGCL-208ENST00000509389 NDUFA2O43678 99 aa12.03□□□□□ -0.48
HMGCL-208ENST00000509389 FCN3O75636 299 aa12.03□□□□□ -0.48
HMGCL-208ENST00000509389 TOX4O94842 621 aa12.03□□□□□ -0.48
HMGCL-208ENST00000509389 GYPAP02724 150 aa12.03□□□□□ -0.48
HMGCL-208ENST00000509389 CHRM2P08172 466 aa12.03□□□□□ -0.48
HMGCL-208ENST00000509389 MELTFP08582 738 aa12.03□□□□□ -0.48
HMGCL-208ENST00000509389 MGMTP16455 207 aa12.03□□□□□ -0.48
HMGCL-208ENST00000509389 PITPNAQ00169 270 aa12.03□□□□□ -0.48
HMGCL-208ENST00000509389 MOGAT2Q3SYC2 334 aa12.03□□□□□ -0.48
HMGCL-208ENST00000509389 FIP1L1Q6UN15 594 aaKnown RBP12.03□□□□□ -0.48
HMGCL-208ENST00000509389 Q8N402 240 aa12.03□□□□□ -0.48
HMGCL-208ENST00000509389 GCSAMQ8N6F7 178 aa12.03□□□□□ -0.48
HMGCL-208ENST00000509389 RNF170Q96K19 258 aa12.03□□□□□ -0.48
HMGCL-208ENST00000509389 CHIAQ9BZP6 476 aa12.03□□□□□ -0.48
HMGCL-208ENST00000509389 METTL9Q9H1A3 318 aa12.03□□□□□ -0.48
HMGCL-208ENST00000509389 DIABLOQ9NR28 239 aa12.03□□□□□ -0.48
HMGCL-208ENST00000509389 A0A1B0GUS0 222 aa12.02□□□□□ -0.49
HMGCL-208ENST00000509389 METTL21EPA6NDL7 271 aa12.02□□□□□ -0.49
HMGCL-208ENST00000509389 A6NLC8 198 aa12.02□□□□□ -0.49
HMGCL-208ENST00000509389 GABARAPH6UMI1 98 aa12.02□□□□□ -0.49
HMGCL-208ENST00000509389 ANGPTL7O43827 346 aa12.02□□□□□ -0.49
HMGCL-208ENST00000509389 NOS1APO75052 506 aaPredicted RBP12.02□□□□□ -0.49
HMGCL-208ENST00000509389 LHBP01229 141 aa12.02□□□□□ -0.49
HMGCL-208ENST00000509389 CRYBA1P05813 215 aa12.02□□□□□ -0.49
HMGCL-208ENST00000509389 TMEM225BP0DP42 221 aa12.02□□□□□ -0.49
HMGCL-208ENST00000509389 HAAOP46952 286 aa12.02□□□□□ -0.49
HMGCL-208ENST00000509389 ERVK11-1P61568 191 aa12.02□□□□□ -0.49
HMGCL-208ENST00000509389 RELBQ01201 579 aa12.02□□□□□ -0.49
HMGCL-208ENST00000509389 SRSF4Q08170 494 aaKnown RBP12.02□□□□□ -0.49
HMGCL-208ENST00000509389 ZNF260Q3ZCT1 412 aa12.02□□□□□ -0.49
HMGCL-208ENST00000509389 SLC22A6Q4U2R8 563 aa12.02□□□□□ -0.49
HMGCL-208ENST00000509389 HACD4Q5VWC8 232 aa12.02□□□□□ -0.49
HMGCL-208ENST00000509389 FAM90A1Q86YD7 464 aa12.02□□□□□ -0.49
HMGCL-208ENST00000509389 SNX29P2Q8IUI4 249 aa12.02□□□□□ -0.49
HMGCL-208ENST00000509389 TMEM86BQ8N661 226 aa12.02□□□□□ -0.49
HMGCL-208ENST00000509389 KIR3DL3Q8N743 410 aa12.02□□□□□ -0.49
HMGCL-208ENST00000509389 OR51T1Q8NGJ9 327 aa12.02□□□□□ -0.49
HMGCL-208ENST00000509389 OR8S1Q8NH09 359 aa12.02□□□□□ -0.49
HMGCL-208ENST00000509389 AQP3Q92482 292 aa12.02□□□□□ -0.49
HMGCL-208ENST00000509389 FAM46BQ96A09 425 aa12.02□□□□□ -0.49
HMGCL-208ENST00000509389 HIST1H2AAQ96QV6 131 aa12.02□□□□□ -0.49
HMGCL-208ENST00000509389 URM1Q9BTM9 101 aaKnown RBP12.02□□□□□ -0.49
HMGCL-208ENST00000509389 SIRPDQ9H106 197 aa12.02□□□□□ -0.49
HMGCL-208ENST00000509389 ATG5Q9H1Y0 275 aa12.02□□□□□ -0.49
HMGCL-208ENST00000509389 BEX1Q9HBH7 125 aa12.02□□□□□ -0.49
HMGCL-208ENST00000509389 C14orf119Q9NWQ9 140 aa12.02□□□□□ -0.49
HMGCL-208ENST00000509389 MTCH1Q9NZJ7 389 aa12.02□□□□□ -0.49
HMGCL-208ENST00000509389 C1RLQ9NZP8 487 aa12.02□□□□□ -0.49
HMGCL-208ENST00000509389 IGHV3OR15-7A0A075B7D8 119 aa12.01□□□□□ -0.49
HMGCL-208ENST00000509389 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.01□□□□□ -0.49
HMGCL-208ENST00000509389 A0A1W2PQ09 198 aa12.01□□□□□ -0.49
HMGCL-208ENST00000509389 hCG_1807616A0A1W2PRN6 198 aa12.01□□□□□ -0.49
HMGCL-208ENST00000509389 FAM90A10PA6NDY2 464 aa12.01□□□□□ -0.49
HMGCL-208ENST00000509389 FAM90A18PA6NE21 464 aa12.01□□□□□ -0.49
HMGCL-208ENST00000509389 FAM90A16PA6NEW6 464 aa12.01□□□□□ -0.49
HMGCL-208ENST00000509389 FAM90A20PA6NIJ5 464 aa12.01□□□□□ -0.49
HMGCL-208ENST00000509389 FAM90A8PA6NJQ4 464 aa12.01□□□□□ -0.49
HMGCL-208ENST00000509389 FAM90A7PA6NKC0 464 aa12.01□□□□□ -0.49
HMGCL-208ENST00000509389 FAM90A22PA8MWA6 464 aa12.01□□□□□ -0.49
HMGCL-208ENST00000509389 FAM90A12PA8MX19 464 aa12.01□□□□□ -0.49
HMGCL-208ENST00000509389 FAM90A5PA8MXJ8 464 aa12.01□□□□□ -0.49
HMGCL-208ENST00000509389 FAM90A23PA8MXZ1 464 aa12.01□□□□□ -0.49
HMGCL-208ENST00000509389 MFNGO00587 321 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms