RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 CNOT4O95628 575 aaKnown RBP12.63□□□□□ -0.39
PHF3-209ENST00000509330 IGKV1-13P0DP09 117 aa12.63□□□□□ -0.39
PHF3-209ENST00000509330 MPV17LQ2QL34 196 aa12.63□□□□□ -0.39
PHF3-209ENST00000509330 IAH1Q2TAA2 248 aaPredicted RBP12.63□□□□□ -0.39
PHF3-209ENST00000509330 DHRS11Q6UWP2 260 aa12.63□□□□□ -0.39
PHF3-209ENST00000509330 Q8NA96 180 aa12.63□□□□□ -0.39
PHF3-209ENST00000509330 KIRREL1Q96J84 757 aa12.63□□□□□ -0.39
PHF3-209ENST00000509330 RCC2Q9P258 522 aaKnown RBP12.63□□□□□ -0.39
PHF3-209ENST00000509330 TNFSF18Q9UNG2 199 aa12.63□□□□□ -0.39
PHF3-209ENST00000509330 SLC25A15Q9Y619 301 aa12.63□□□□□ -0.39
PHF3-209ENST00000509330 PKDREJQ9NTG1 2253 aa12.62□□□□□ -0.39
PHF3-209ENST00000509330 CRYM-AS1A6NIL9 109 aa12.62□□□□□ -0.39
PHF3-209ENST00000509330 NAPSAO96009 420 aa12.62□□□□□ -0.39
PHF3-209ENST00000509330 RBM39Q14498 530 aaKnown RBP12.62□□□□□ -0.39
PHF3-209ENST00000509330 TBR1Q16650 682 aa12.62□□□□□ -0.39
PHF3-209ENST00000509330 TPRX1Q8N7U7 411 aa12.62□□□□□ -0.39
PHF3-209ENST00000509330 OR2Z1Q8NG97 314 aa12.62□□□□□ -0.39
PHF3-209ENST00000509330 PLPPR1Q8TBJ4 325 aa12.62□□□□□ -0.39
PHF3-209ENST00000509330 MRPL30Q8TCC3 161 aaKnown RBP12.62□□□□□ -0.39
PHF3-209ENST00000509330 WASF3Q9UPY6 502 aa12.62□□□□□ -0.39
PHF3-209ENST00000509330 RPS10-NUDT3A0A1W2PQS6 291 aa12.62□□□□□ -0.39
PHF3-209ENST00000509330 MSGN1A6NI15 193 aa12.62□□□□□ -0.39
PHF3-209ENST00000509330 SLC33A1O00400 549 aaPredicted RBP12.62□□□□□ -0.39
PHF3-209ENST00000509330 RPA2P15927 270 aa12.62□□□□□ -0.39
PHF3-209ENST00000509330 P2RY6Q15077 328 aa12.62□□□□□ -0.39
PHF3-209ENST00000509330 LYZL2Q7Z4W2 148 aa12.62□□□□□ -0.39
PHF3-209ENST00000509330 OR8G5Q8NG78 346 aa12.62□□□□□ -0.39
PHF3-209ENST00000509330 RRNAD1Q96FB5 475 aaKnown RBP12.62□□□□□ -0.39
PHF3-209ENST00000509330 TK1P04183 234 aa12.61□□□□□ -0.39
PHF3-209ENST00000509330 C4BPBP20851 252 aa12.61□□□□□ -0.39
PHF3-209ENST00000509330 RAB14P61106 215 aa12.61□□□□□ -0.39
PHF3-209ENST00000509330 NAAAQ02083 359 aa12.61□□□□□ -0.39
PHF3-209ENST00000509330 SNTB1Q13884 538 aaKnown RBP12.61□□□□□ -0.39
PHF3-209ENST00000509330 SURF2Q15527 256 aaPredicted RBP12.61□□□□□ -0.39
PHF3-209ENST00000509330 FAM53AQ6NSI3 398 aaPredicted RBP12.61□□□□□ -0.39
PHF3-209ENST00000509330 INO80EQ8NBZ0 244 aaPredicted RBP12.61□□□□□ -0.39
PHF3-209ENST00000509330 C1orf162Q8NEQ5 155 aaPredicted RBP12.61□□□□□ -0.39
PHF3-209ENST00000509330 CXorf58Q96LI9 332 aa12.61□□□□□ -0.39
PHF3-209ENST00000509330 PKIBQ9C010 78 aa12.61□□□□□ -0.39
PHF3-209ENST00000509330 ASF1BQ9NVP2 202 aa12.61□□□□□ -0.39
PHF3-209ENST00000509330 C1orf123Q9NWV4 160 aa12.61□□□□□ -0.39
PHF3-209ENST00000509330 TREM2Q9NZC2 230 aa12.61□□□□□ -0.39
PHF3-209ENST00000509330 OR1A1Q9P1Q5 309 aa12.61□□□□□ -0.39
PHF3-209ENST00000509330 ZNF718Q3SXZ3 478 aa12.61□□□□□ -0.39
PHF3-209ENST00000509330 SPRNQ5BIV9 151 aa12.61□□□□□ -0.39
PHF3-209ENST00000509330 GGNBP1Q5YKI7 109 aa12.61□□□□□ -0.39
PHF3-209ENST00000509330 GFRALQ6UXV0 394 aa12.61□□□□□ -0.39
PHF3-209ENST00000509330 FAM57AQ8TBR7 257 aa12.61□□□□□ -0.39
PHF3-209ENST00000509330 MOB3AQ96BX8 217 aa12.61□□□□□ -0.39
PHF3-209ENST00000509330 NAA60Q9H7X0 242 aa12.61□□□□□ -0.39
PHF3-209ENST00000509330 RAB18Q9NP72 206 aa12.61□□□□□ -0.39
PHF3-209ENST00000509330 RAXQ9Y2V3 346 aa12.61□□□□□ -0.39
PHF3-209ENST00000509330 LSM5Q9Y4Y9 91 aaKnown RBP12.61□□□□□ -0.39
PHF3-209ENST00000509330 COL6A6A6NMZ7 2263 aa12.61□□□□□ -0.39
PHF3-209ENST00000509330 KANTRA0A1W2PQU2 76 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 ATP6V1G2-DDX39BF2Z307 99 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 DIRAS3O95661 229 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 HLA-GP17693 338 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 Q6P435 159 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 CLEC9AQ6UXN8 241 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 ZNF818PQ6ZRF7 136 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 DOLPP1Q86YN1 238 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 TP53RKQ96S44 253 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 DMRTA2Q96SC8 542 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 RNF126Q9BV68 326 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 CCL28Q9NRJ3 127 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 TRAPPC2LQ9UL33 140 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 POLDIP2Q9Y2S7 368 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 A0A0B4J2A0 478 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 F5H0A9 414 aaPredicted RBP12.6□□□□□ -0.39
PHF3-209ENST00000509330 ATXN7O15265 892 aaPredicted RBP12.6□□□□□ -0.39
PHF3-209ENST00000509330 NXPH3O95157 252 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 NHLRC3Q5JS37 347 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 GAPTQ8N292 157 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 SNRNP40Q96DI7 357 aaKnown RBP12.6□□□□□ -0.39
PHF3-209ENST00000509330 RASL12Q9NYN1 266 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 SHPKQ9UHJ6 478 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 FAM90A10PA6NDY2 464 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 FAM90A18PA6NE21 464 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 FAM90A16PA6NEW6 464 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 FAM90A20PA6NIJ5 464 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 FAM90A8PA6NJQ4 464 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 FAM90A7PA6NKC0 464 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 FAM90A22PA8MWA6 464 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 FAM90A12PA8MX19 464 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 FAM90A5PA8MXJ8 464 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 FAM90A23PA8MXZ1 464 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 LEUTXA8MZ59 168 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 PSPNO60542 156 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 IGLV1-44P01699 117 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 FAM90A15PP0C7V4 464 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 FAM90A13PP0C7W8 464 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 FAM90A14PP0C7W9 464 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 FAM90A24PP0C7X0 464 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 PGA5P0DJD9 388 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 GNRHRP30968 328 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 RGS7BPQ6MZT1 257 aaPredicted RBP12.6□□□□□ -0.39
PHF3-209ENST00000509330 COMMD7Q86VX2 200 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 ZNF565Q8N9K5 539 aa12.6□□□□□ -0.39
PHF3-209ENST00000509330 LHFPL5Q8TAF8 219 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms