RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 TNFAIP8O95379 198 aa7.35□□□□□ -1.23
NEDD9-211ENST00000508546 TMEM11P17152 192 aa7.35□□□□□ -1.23
NEDD9-211ENST00000508546 CCL1P22362 96 aa7.35□□□□□ -1.23
NEDD9-211ENST00000508546 FUT6P51993 359 aa7.35□□□□□ -1.23
NEDD9-211ENST00000508546 RPS7P62081 194 aaKnown RBP7.35□□□□□ -1.23
NEDD9-211ENST00000508546 CDK5Q00535 292 aa7.35□□□□□ -1.23
NEDD9-211ENST00000508546 FOXE3Q13461 319 aa7.35□□□□□ -1.23
NEDD9-211ENST00000508546 GINS1Q14691 196 aa7.35□□□□□ -1.23
NEDD9-211ENST00000508546 UBE2V2Q15819 145 aa7.35□□□□□ -1.23
NEDD9-211ENST00000508546 ZNF260Q3ZCT1 412 aa7.35□□□□□ -1.23
NEDD9-211ENST00000508546 CXorf66Q5JRM2 361 aaPredicted RBP7.35□□□□□ -1.23
NEDD9-211ENST00000508546 SPIN3Q5JUX0 258 aa7.35□□□□□ -1.23
NEDD9-211ENST00000508546 TTC23Q5W5X9 447 aa7.35□□□□□ -1.23
NEDD9-211ENST00000508546 SLC25A26Q70HW3 274 aa7.35□□□□□ -1.23
NEDD9-211ENST00000508546 OR8H3Q8N146 312 aa7.35□□□□□ -1.23
NEDD9-211ENST00000508546 FAM58AQ8N1B3 248 aa7.35□□□□□ -1.23
NEDD9-211ENST00000508546 BBS1Q8NFJ9 593 aa7.35□□□□□ -1.23
NEDD9-211ENST00000508546 OR4D6Q8NGJ1 314 aa7.35□□□□□ -1.23
NEDD9-211ENST00000508546 OR56B4Q8NH76 319 aa7.35□□□□□ -1.23
NEDD9-211ENST00000508546 OR9G1Q8NH87 305 aa7.35□□□□□ -1.23
NEDD9-211ENST00000508546 TOMM40LQ969M1 308 aa7.35□□□□□ -1.23
NEDD9-211ENST00000508546 FEVQ99581 238 aa7.35□□□□□ -1.23
NEDD9-211ENST00000508546 GABARAPL3Q9BY60 117 aa7.35□□□□□ -1.23
NEDD9-211ENST00000508546 FAM118AQ9NWS6 357 aa7.35□□□□□ -1.23
NEDD9-211ENST00000508546 ENOPH1Q9UHY7 261 aa7.35□□□□□ -1.23
NEDD9-211ENST00000508546 OR52A1Q9UKL2 312 aa7.35□□□□□ -1.23
NEDD9-211ENST00000508546 IKZF2Q9UKS7 526 aa7.35□□□□□ -1.23
NEDD9-211ENST00000508546 COPS3Q9UNS2 423 aa7.35□□□□□ -1.23
NEDD9-211ENST00000508546 AMMECR1Q9Y4X0 333 aaPredicted RBP7.35□□□□□ -1.23
NEDD9-211ENST00000508546 R4GMQ9 66 aa7.35□□□□□ -1.23
NEDD9-211ENST00000508546 HECTD4Q9Y4D8 3996 aa7.35□□□□□ -1.23
NEDD9-211ENST00000508546 ZNF729A6NN14 1252 aaPredicted RBP7.34□□□□□ -1.23
NEDD9-211ENST00000508546 SLC16A6O15403 523 aa7.34□□□□□ -1.23
NEDD9-211ENST00000508546 ENTPD6O75354 484 aa7.34□□□□□ -1.23
NEDD9-211ENST00000508546 GATBO75879 557 aaKnown RBP7.34□□□□□ -1.23
NEDD9-211ENST00000508546 INMTO95050 263 aa7.34□□□□□ -1.23
NEDD9-211ENST00000508546 LY86O95711 162 aa7.34□□□□□ -1.23
NEDD9-211ENST00000508546 CSN2P05814 226 aa7.34□□□□□ -1.23
NEDD9-211ENST00000508546 ELANEP08246 267 aa7.34□□□□□ -1.23
NEDD9-211ENST00000508546 DUSP1P28562 367 aa7.34□□□□□ -1.23
NEDD9-211ENST00000508546 PTGFRP43088 359 aa7.34□□□□□ -1.23
NEDD9-211ENST00000508546 GLIPR1P48060 266 aa7.34□□□□□ -1.23
NEDD9-211ENST00000508546 NPBWR2P48146 333 aa7.34□□□□□ -1.23
NEDD9-211ENST00000508546 RAB7AP51149 207 aa7.34□□□□□ -1.23
NEDD9-211ENST00000508546 GPR50Q13585 617 aa7.34□□□□□ -1.23
NEDD9-211ENST00000508546 APOFQ13790 326 aa7.34□□□□□ -1.23
NEDD9-211ENST00000508546 HES1Q14469 280 aa7.34□□□□□ -1.23
NEDD9-211ENST00000508546 RBM39Q14498 530 aaKnown RBP7.34□□□□□ -1.23
NEDD9-211ENST00000508546 BCL2L15Q5TBC7 163 aa7.34□□□□□ -1.23
NEDD9-211ENST00000508546 C8orf59Q8N0T1 100 aaPredicted RBP7.34□□□□□ -1.23
NEDD9-211ENST00000508546 SETD9Q8NE22 299 aa7.34□□□□□ -1.23
NEDD9-211ENST00000508546 C4orf3Q8WVX3 66 aa7.34□□□□□ -1.23
NEDD9-211ENST00000508546 BORCS8Q96FH0 119 aa7.34□□□□□ -1.23
NEDD9-211ENST00000508546 HRASLS5Q96KN8 279 aa7.34□□□□□ -1.23
NEDD9-211ENST00000508546 CHST5Q9GZS9 411 aa7.34□□□□□ -1.23
NEDD9-211ENST00000508546 RBFOX1Q9NWB1 397 aaKnown RBP7.34□□□□□ -1.23
NEDD9-211ENST00000508546 GTF2A1LQ9UNN4 478 aa7.34□□□□□ -1.23
NEDD9-211ENST00000508546 SNX5Q9Y5X3 404 aa7.34□□□□□ -1.23
NEDD9-211ENST00000508546 LOC100130705A0A1B0GUX0 176 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 ODAMA1E959 279 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 CCDC182A6NF36 153 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 LINC01548A6NM66 108 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 J3QR06 171 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 SH2D1BO14796 132 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 OR2H2O95918 312 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 CYB5AP00167 134 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 HCKP08631 526 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 MRPL3P09001 348 aaKnown RBP7.33□□□□□ -1.24
NEDD9-211ENST00000508546 FRMD6-AS1P0C7T7 363 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 PRKACAP17612 351 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 BCL3P20749 454 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 GPR12P47775 334 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 AESQ08117 197 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 MADCAM1Q13477 382 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 EBI3Q14213 229 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 HNF4GQ14541 408 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 C17orf58Q2M2W7 97 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 UTF1Q5T230 341 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 FAM27D1Q5T7N8 215 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 ZNF691Q5VV52 312 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 ZNF322Q6U7Q0 402 aaPredicted RBP7.33□□□□□ -1.24
NEDD9-211ENST00000508546 OVCH2Q7RTZ1 564 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 ZNF429Q86V71 674 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 TGIF2LXQ8IUE1 241 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 CCDC54Q8NEL0 328 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 DNAAF1Q8NEP3 725 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 ISOC1Q96CN7 298 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 C10orf35Q96D05 121 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 KIRREL1Q96J84 757 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 MNTQ99583 582 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 APOL4Q9BPW4 351 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 TM2D3Q9BRN9 247 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 TTTY10Q9BZA0 68 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 ABCG5Q9H222 651 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 EDA2RQ9HAV5 297 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 PLEKHA1Q9HB21 404 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 HMG20AQ9NP66 347 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 LIN7CQ9NUP9 197 aaKnown RBP7.33□□□□□ -1.24
NEDD9-211ENST00000508546 GMPPBQ9Y5P6 360 aa7.33□□□□□ -1.24
NEDD9-211ENST00000508546 KBTBD11-OT1A0A1B0GTJ5 212 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms