RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 FOXRED1Q96CU9 486 aaPredicted RBP13.04□□□□□ -0.32
LMNA-222ENST00000508500 DGCR14Q96DF8 476 aaKnown RBP13.04□□□□□ -0.32
LMNA-222ENST00000508500 TMEM133Q9H2Q1 129 aa13.04□□□□□ -0.32
LMNA-222ENST00000508500 ZCCHC4Q9H5U6 513 aa13.04□□□□□ -0.32
LMNA-222ENST00000508500 HILPDAQ9Y5L2 63 aa13.04□□□□□ -0.32
LMNA-222ENST00000508500 MYL12BO14950 172 aa13.03□□□□□ -0.32
LMNA-222ENST00000508500 VSIG10L2P0DP72 767 aa13.03□□□□□ -0.32
LMNA-222ENST00000508500 GLIPR1P48060 266 aa13.03□□□□□ -0.32
LMNA-222ENST00000508500 AESQ08117 197 aa13.03□□□□□ -0.32
LMNA-222ENST00000508500 CDK5R1Q15078 307 aa13.03□□□□□ -0.32
LMNA-222ENST00000508500 C11orf88Q6PI97 169 aa13.03□□□□□ -0.32
LMNA-222ENST00000508500 SATL1Q86VE3 508 aa13.03□□□□□ -0.32
LMNA-222ENST00000508500 LYG1Q8N1E2 194 aa13.03□□□□□ -0.32
LMNA-222ENST00000508500 OR52N1Q8NH53 320 aa13.03□□□□□ -0.32
LMNA-222ENST00000508500 RPS4Y2Q8TD47 263 aa13.03□□□□□ -0.32
LMNA-222ENST00000508500 HAVCR2Q8TDQ0 301 aa13.03□□□□□ -0.32
LMNA-222ENST00000508500 RGP1Q92546 391 aaPredicted RBP13.03□□□□□ -0.32
LMNA-222ENST00000508500 CORO2AQ92828 525 aa13.03□□□□□ -0.32
LMNA-222ENST00000508500 COQ2Q96H96 371 aa13.03□□□□□ -0.32
LMNA-222ENST00000508500 PDCD1LG2Q9BQ51 273 aa13.03□□□□□ -0.32
LMNA-222ENST00000508500 EXOSC4Q9NPD3 245 aaKnown RBP13.03□□□□□ -0.32
LMNA-222ENST00000508500 UBE2J1Q9Y385 318 aaPredicted RBP13.03□□□□□ -0.32
LMNA-222ENST00000508500 FAM90A22PA8MWA6 464 aa13.02□□□□□ -0.33
LMNA-222ENST00000508500 SH2D1BO14796 132 aa13.02□□□□□ -0.33
LMNA-222ENST00000508500 LIMS3P0CW19 117 aa13.02□□□□□ -0.33
LMNA-222ENST00000508500 LIMS4P0CW20 117 aa13.02□□□□□ -0.33
LMNA-222ENST00000508500 GTF2A1P52655 376 aaPredicted RBP13.02□□□□□ -0.33
LMNA-222ENST00000508500 WNT4P56705 351 aa13.02□□□□□ -0.33
LMNA-222ENST00000508500 BLCAPP62952 87 aa13.02□□□□□ -0.33
LMNA-222ENST00000508500 MINOS1Q5TGZ0 78 aa13.02□□□□□ -0.33
LMNA-222ENST00000508500 PRAMEF5Q5TYX0 476 aa13.02□□□□□ -0.33
LMNA-222ENST00000508500 TMPRSS11AQ6ZMR5 421 aa13.02□□□□□ -0.33
LMNA-222ENST00000508500 SAXO1Q8IYX7 474 aa13.02□□□□□ -0.33
LMNA-222ENST00000508500 PARP16Q8N5Y8 322 aa13.02□□□□□ -0.33
LMNA-222ENST00000508500 CLEC7AQ9BXN2 247 aa13.02□□□□□ -0.33
LMNA-222ENST00000508500 RBM38Q9H0Z9 239 aaKnown RBP13.02□□□□□ -0.33
LMNA-222ENST00000508500 MINOS1-NBL1R4GNA1 71 aa13.02□□□□□ -0.33
LMNA-222ENST00000508500 FAM172BPA6NC97 362 aa13.01□□□□□ -0.33
LMNA-222ENST00000508500 SLC33A1O00400 549 aaPredicted RBP13.01□□□□□ -0.33
LMNA-222ENST00000508500 ALX3O95076 343 aa13.01□□□□□ -0.33
LMNA-222ENST00000508500 CD28P10747 220 aa13.01□□□□□ -0.33
LMNA-222ENST00000508500 MAP2K4P45985 399 aa13.01□□□□□ -0.33
LMNA-222ENST00000508500 TMBIM6P55061 237 aa13.01□□□□□ -0.33
LMNA-222ENST00000508500 BDH1Q02338 343 aa13.01□□□□□ -0.33
LMNA-222ENST00000508500 SPHARQ15513 63 aa13.01□□□□□ -0.33
LMNA-222ENST00000508500 KISS1Q15726 138 aa13.01□□□□□ -0.33
LMNA-222ENST00000508500 TMEM95Q3KNT9 176 aa13.01□□□□□ -0.33
LMNA-222ENST00000508500 TRAPPC6BQ86SZ2 158 aa13.01□□□□□ -0.33
LMNA-222ENST00000508500 OR51A2Q8NGJ7 313 aa13.01□□□□□ -0.33
LMNA-222ENST00000508500 WNT10AQ9GZT5 417 aa13.01□□□□□ -0.33
LMNA-222ENST00000508500 ZNF286AQ9HBT8 521 aa13.01□□□□□ -0.33
LMNA-222ENST00000508500 ABCB10Q9NRK6 738 aa13.01□□□□□ -0.33
LMNA-222ENST00000508500 LSM2Q9Y333 95 aaKnown RBP13.01□□□□□ -0.33
LMNA-222ENST00000508500 ADARB2-AS1A8MUL3 147 aa13□□□□□ -0.33
LMNA-222ENST00000508500 G3V4G9 280 aa13□□□□□ -0.33
LMNA-222ENST00000508500 SULT1B1O43704 296 aa13□□□□□ -0.33
LMNA-222ENST00000508500 IGLV1-47P01700 117 aa13□□□□□ -0.33
LMNA-222ENST00000508500 CSN2P05814 226 aa13□□□□□ -0.33
LMNA-222ENST00000508500 CGB3P0DN86 165 aa13□□□□□ -0.33
LMNA-222ENST00000508500 CGB7P0DN87 165 aa13□□□□□ -0.33
LMNA-222ENST00000508500 ZNF44P15621 663 aa13□□□□□ -0.33
LMNA-222ENST00000508500 CDK2P24941 298 aa13□□□□□ -0.33
LMNA-222ENST00000508500 CD24P25063 80 aa13□□□□□ -0.33
LMNA-222ENST00000508500 GP2P55259 537 aaKnown RBP13□□□□□ -0.33
LMNA-222ENST00000508500 SCN1BQ07699 218 aa13□□□□□ -0.33
LMNA-222ENST00000508500 MLLT11Q13015 90 aaPredicted RBP13□□□□□ -0.33
LMNA-222ENST00000508500 C17orf58Q2M2W7 97 aa13□□□□□ -0.33
LMNA-222ENST00000508500 ZNF529Q6P280 563 aa13□□□□□ -0.33
LMNA-222ENST00000508500 HEPN1Q6WQI6 88 aa13□□□□□ -0.33
LMNA-222ENST00000508500 SERPINA12Q8IW75 414 aa13□□□□□ -0.33
LMNA-222ENST00000508500 ABHD12Q8N2K0 398 aa13□□□□□ -0.33
LMNA-222ENST00000508500 OR5AK2Q8NH90 309 aa13□□□□□ -0.33
LMNA-222ENST00000508500 NDNFQ8TB73 568 aa13□□□□□ -0.33
LMNA-222ENST00000508500 OCSTAMPQ9BR26 566 aa13□□□□□ -0.33
LMNA-222ENST00000508500 PPIL3Q9H2H8 161 aaKnown RBP13□□□□□ -0.33
LMNA-222ENST00000508500 TAS2R3Q9NYW6 316 aa13□□□□□ -0.33
LMNA-222ENST00000508500 GLS2Q9UI32 602 aa13□□□□□ -0.33
LMNA-222ENST00000508500 PITPNC1Q9UKF7 332 aa13□□□□□ -0.33
LMNA-222ENST00000508500 CEPT1Q9Y6K0 416 aa13□□□□□ -0.33
LMNA-222ENST00000508500 ODAMA1E959 279 aa12.99□□□□□ -0.33
LMNA-222ENST00000508500 TMEM212A6NML5 194 aa12.99□□□□□ -0.33
LMNA-222ENST00000508500 NOL3O60936 208 aaKnown RBP12.99□□□□□ -0.33
LMNA-222ENST00000508500 OPN1MWP04001 364 aa12.99□□□□□ -0.33
LMNA-222ENST00000508500 HCKP08631 526 aa12.99□□□□□ -0.33
LMNA-222ENST00000508500 OCM2P0CE71 109 aa12.99□□□□□ -0.33
LMNA-222ENST00000508500 OCMP0CE72 109 aaPredicted RBP12.99□□□□□ -0.33
LMNA-222ENST00000508500 OPN1MW2P0DN77 364 aa12.99□□□□□ -0.33
LMNA-222ENST00000508500 OPN1MW3P0DN78 364 aa12.99□□□□□ -0.33
LMNA-222ENST00000508500 PSMB9P28065 219 aa12.99□□□□□ -0.33
LMNA-222ENST00000508500 HTR1DP28221 377 aa12.99□□□□□ -0.33
LMNA-222ENST00000508500 ETV1P50549 477 aa12.99□□□□□ -0.33
LMNA-222ENST00000508500 TAS2R43P59537 309 aa12.99□□□□□ -0.33
LMNA-222ENST00000508500 MRPL28Q13084 256 aaKnown RBP12.99□□□□□ -0.33
LMNA-222ENST00000508500 GPR50Q13585 617 aa12.99□□□□□ -0.33
LMNA-222ENST00000508500 ATXN7L3Q14CW9 347 aaPredicted RBP12.99□□□□□ -0.33
LMNA-222ENST00000508500 TIMM50Q3ZCQ8 353 aa12.99□□□□□ -0.33
LMNA-222ENST00000508500 ANKRD13BQ86YJ7 626 aa12.99□□□□□ -0.33
LMNA-222ENST00000508500 OR5D14Q8NGL3 314 aa12.99□□□□□ -0.33
LMNA-222ENST00000508500 RAB2BQ8WUD1 216 aa12.99□□□□□ -0.33
LMNA-222ENST00000508500 OR5M11Q96RB7 305 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms