RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 BTRCQ9Y297 605 aa1.57□□□□□ -2.16
LSM6-205ENST00000507449 TRAPPC1Q9Y5R8 145 aa1.57□□□□□ -2.16
LSM6-205ENST00000507449 USH1CQ9Y6N9 552 aa1.57□□□□□ -2.16
LSM6-205ENST00000507449 U3KQK5 164 aa1.57□□□□□ -2.16
LSM6-205ENST00000507449 SSH2Q76I76 1423 aa1.57□□□□□ -2.16
LSM6-205ENST00000507449 IGKV1D-37A0A075B6S9 117 aa1.56□□□□□ -2.16
LSM6-205ENST00000507449 IGHV1-45A0A0A0MS14 117 aa1.56□□□□□ -2.16
LSM6-205ENST00000507449 IGHV2-26A0A0B4J1V2 119 aa1.56□□□□□ -2.16
LSM6-205ENST00000507449 GOLGA8QA0A0J9YX86 632 aa1.56□□□□□ -2.16
LSM6-205ENST00000507449 A0A1B0GX12 115 aa1.56□□□□□ -2.16
LSM6-205ENST00000507449 LEUTXA8MZ59 168 aa1.56□□□□□ -2.16
LSM6-205ENST00000507449 GGTLC3B5MD39 225 aa1.56□□□□□ -2.16
LSM6-205ENST00000507449 C8orf87E5RJ46 101 aa1.56□□□□□ -2.16
LSM6-205ENST00000507449 POLR3GO15318 223 aaPredicted RBP1.56□□□□□ -2.16
LSM6-205ENST00000507449 SGCEO43556 437 aa1.56□□□□□ -2.16
LSM6-205ENST00000507449 LDOC1O95751 146 aaPredicted RBP1.56□□□□□ -2.16
LSM6-205ENST00000507449 EPPINO95925 133 aa1.56□□□□□ -2.16
LSM6-205ENST00000507449 GP1BAP07359 652 aa1.56□□□□□ -2.16
LSM6-205ENST00000507449 SLC35E2BP0CK96 405 aa1.56□□□□□ -2.16
LSM6-205ENST00000507449 CTLA4P16410 223 aa1.56□□□□□ -2.16
LSM6-205ENST00000507449 ZNF708P17019 499 aa1.56□□□□□ -2.16
LSM6-205ENST00000507449 OR2B6P58173 313 aa1.56□□□□□ -2.16
LSM6-205ENST00000507449 BSXQ3C1V8 233 aa1.56□□□□□ -2.16
LSM6-205ENST00000507449 OR10J3Q5JRS4 329 aa1.56□□□□□ -2.16
LSM6-205ENST00000507449 LAMTOR1Q6IAA8 161 aa1.56□□□□□ -2.16
LSM6-205ENST00000507449 FAM183BPQ6ZVS7 135 aa1.56□□□□□ -2.16
LSM6-205ENST00000507449 FAM19A3Q7Z5A8 133 aa1.56□□□□□ -2.16
LSM6-205ENST00000507449 SLC25A45Q8N413 288 aa1.56□□□□□ -2.16
LSM6-205ENST00000507449 EIF4E3Q8N5X7 224 aaKnown RBP1.56□□□□□ -2.16
LSM6-205ENST00000507449 Q8NAQ8 132 aa1.56□□□□□ -2.16
LSM6-205ENST00000507449 PYURFQ96I23 114 aa1.56□□□□□ -2.16
LSM6-205ENST00000507449 PGLYRP3Q96LB9 341 aa1.56□□□□□ -2.16
LSM6-205ENST00000507449 B9D2Q9BPU9 175 aa1.56□□□□□ -2.16
LSM6-205ENST00000507449 OR2D2Q9H210 308 aa1.56□□□□□ -2.16
LSM6-205ENST00000507449 FBXL15Q9H469 300 aa1.56□□□□□ -2.16
LSM6-205ENST00000507449 RHOFQ9HBH0 211 aa1.56□□□□□ -2.16
LSM6-205ENST00000507449 OR5V1Q9UGF6 321 aa1.56□□□□□ -2.16
LSM6-205ENST00000507449 TBL2Q9Y4P3 447 aaKnown RBP1.56□□□□□ -2.16
LSM6-205ENST00000507449 POLR3AO14802 1390 aaPredicted RBP1.56□□□□□ -2.16
LSM6-205ENST00000507449 CACNA1DQ01668 2161 aa1.55□□□□□ -2.16
LSM6-205ENST00000507449 IGLV10-54A0A075B6I4 117 aa1.55□□□□□ -2.16
LSM6-205ENST00000507449 A0A1B0GTI1 187 aa1.55□□□□□ -2.16
LSM6-205ENST00000507449 A6NED7 52 aa1.55□□□□□ -2.16
LSM6-205ENST00000507449 FAM183AA6NL82 134 aa1.55□□□□□ -2.16
LSM6-205ENST00000507449 D6RAR5 112 aa1.55□□□□□ -2.16
LSM6-205ENST00000507449 RNASEK-C17orf49H0YIS7 233 aa1.55□□□□□ -2.16
LSM6-205ENST00000507449 TMEM250H0YL14 139 aa1.55□□□□□ -2.16
LSM6-205ENST00000507449 K7ERQ8 282 aa1.55□□□□□ -2.16
LSM6-205ENST00000507449 UBDO15205 165 aa1.55□□□□□ -2.16
LSM6-205ENST00000507449 AQP9O43315 295 aa1.55□□□□□ -2.16
LSM6-205ENST00000507449 CBR3O75828 277 aa1.55□□□□□ -2.16
LSM6-205ENST00000507449 PDYNP01213 254 aa1.55□□□□□ -2.16
LSM6-205ENST00000507449 S100A2P29034 98 aa1.55□□□□□ -2.16
LSM6-205ENST00000507449 RPA3P35244 121 aaPredicted RBP1.55□□□□□ -2.16
LSM6-205ENST00000507449 MAGEA6P43360 314 aa1.55□□□□□ -2.16
LSM6-205ENST00000507449 GOLGA7BQ2TAP0 167 aa1.55□□□□□ -2.16
LSM6-205ENST00000507449 DGAT2L6Q6ZPD8 337 aa1.55□□□□□ -2.16
LSM6-205ENST00000507449 Q6ZQT7 251 aa1.55□□□□□ -2.16
LSM6-205ENST00000507449 USP50Q70EL3 339 aaPredicted RBP1.55□□□□□ -2.16
LSM6-205ENST00000507449 C10orf107Q8IVU9 208 aa1.55□□□□□ -2.16
LSM6-205ENST00000507449 TCAIMQ8N3R3 496 aa1.55□□□□□ -2.16
LSM6-205ENST00000507449 FAM45AQ8TCE6 357 aa1.55□□□□□ -2.16
LSM6-205ENST00000507449 APOBEC3DQ96AK3 386 aaPredicted RBP1.55□□□□□ -2.16
LSM6-205ENST00000507449 REEP6Q96HR9 211 aa1.55□□□□□ -2.16
LSM6-205ENST00000507449 SERPINB11Q96P15 392 aa1.55□□□□□ -2.16
LSM6-205ENST00000507449 TRIB3Q96RU7 358 aa1.55□□□□□ -2.16
LSM6-205ENST00000507449 APOL4Q9BPW4 351 aa1.55□□□□□ -2.16
LSM6-205ENST00000507449 TAPBPLQ9BX59 468 aa1.55□□□□□ -2.16
LSM6-205ENST00000507449 ABCG5Q9H222 651 aa1.55□□□□□ -2.16
LSM6-205ENST00000507449 METTL17Q9H7H0 456 aaPredicted RBP1.55□□□□□ -2.16
LSM6-205ENST00000507449 POMPQ9Y244 141 aa1.55□□□□□ -2.16
LSM6-205ENST00000507449 AK9Q5TCS8 1911 aa1.54□□□□□ -2.16
LSM6-205ENST00000507449 A0A1B0GU33 70 aa1.54□□□□□ -2.16
LSM6-205ENST00000507449 I3L4J1 428 aa1.54□□□□□ -2.16
LSM6-205ENST00000507449 YKT6O15498 198 aa1.54□□□□□ -2.16
LSM6-205ENST00000507449 FABP7O15540 132 aa1.54□□□□□ -2.16
LSM6-205ENST00000507449 PSIP1O75475 530 aaKnown RBP1.54□□□□□ -2.16
LSM6-205ENST00000507449 POP7O75817 140 aaKnown RBP1.54□□□□□ -2.16
LSM6-205ENST00000507449 FADS2O95864 444 aaKnown RBP1.54□□□□□ -2.16
LSM6-205ENST00000507449 MLNP12872 115 aa1.54□□□□□ -2.16
LSM6-205ENST00000507449 NQO2P16083 231 aa1.54□□□□□ -2.16
LSM6-205ENST00000507449 SPNP16150 400 aa1.54□□□□□ -2.16
LSM6-205ENST00000507449 ZNF3P17036 446 aa1.54□□□□□ -2.16
LSM6-205ENST00000507449 EVI2BP34910 448 aa1.54□□□□□ -2.16
LSM6-205ENST00000507449 RAB25P57735 213 aa1.54□□□□□ -2.16
LSM6-205ENST00000507449 RHOAP61586 193 aa1.54□□□□□ -2.16
LSM6-205ENST00000507449 TNFRSF9Q07011 255 aa1.54□□□□□ -2.16
LSM6-205ENST00000507449 LGALSLQ3ZCW2 172 aaPredicted RBP1.54□□□□□ -2.16
LSM6-205ENST00000507449 CPNE9Q8IYJ1 553 aa1.54□□□□□ -2.16
LSM6-205ENST00000507449 BPIFB6Q8NFQ5 453 aa1.54□□□□□ -2.16
LSM6-205ENST00000507449 PDCD6IPQ8WUM4 868 aaKnown RBP1.54□□□□□ -2.16
LSM6-205ENST00000507449 ZCCHC13Q8WW36 166 aaKnown RBP1.54□□□□□ -2.16
LSM6-205ENST00000507449 CCDC124Q96CT7 223 aaKnown RBP1.54□□□□□ -2.16
LSM6-205ENST00000507449 SLC25A44Q96H78 314 aaPredicted RBP1.54□□□□□ -2.16
LSM6-205ENST00000507449 PRSS27Q9BQR3 290 aa1.54□□□□□ -2.16
LSM6-205ENST00000507449 METTL8Q9H825 291 aaKnown RBP1.54□□□□□ -2.16
LSM6-205ENST00000507449 FADS3Q9Y5Q0 445 aa1.54□□□□□ -2.16
LSM6-205ENST00000507449 NACADO15069 1562 aa1.54□□□□□ -2.16
LSM6-205ENST00000507449 COL5A1P20908 1838 aaPredicted RBP1.54□□□□□ -2.16
LSM6-205ENST00000507449 HMCN1Q96RW7 5635 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms